BLASTX nr result

ID: Panax21_contig00015327 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015327
         (627 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277625.2| PREDICTED: probable ATP-dependent RNA helica...   218   7e-55
emb|CBI15516.3| unnamed protein product [Vitis vinifera]              218   7e-55
emb|CAN67889.1| hypothetical protein VITISV_013607 [Vitis vinifera]   218   7e-55
ref|XP_002520424.1| ATP-dependent RNA helicase, putative [Ricinu...   208   6e-52
ref|XP_004160445.1| PREDICTED: probable ATP-dependent RNA helica...   206   2e-51

>ref|XP_002277625.2| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Vitis
            vinifera]
          Length = 1178

 Score =  218 bits (555), Expect = 7e-55
 Identities = 102/117 (87%), Positives = 111/117 (94%)
 Frame = -2

Query: 626  ESCNTWSHDEHLIRAITCAGLFPGICSVVNKDKSISLKTMEDGSVLLHSNSVNAQEPKIP 447
            E+CN WSHDEHLIRA+ CAGLFPGICSVVNK+KSISLKTMEDG VLL+SNSVNA+EPKIP
Sbjct: 887  EACNKWSHDEHLIRAVICAGLFPGICSVVNKEKSISLKTMEDGQVLLYSNSVNAREPKIP 946

Query: 446  YPWLVFNEKLKVNSVFLRDSTDVSDSVVLLFGGNISRGGLDGHLKMLGGYLEFFMNP 276
            YPWLVFNEK+KVNSVFLRDST VSDS++LLFGG ISRGG+DGHLKMLGGYLEFFM P
Sbjct: 947  YPWLVFNEKVKVNSVFLRDSTAVSDSMLLLFGGRISRGGIDGHLKMLGGYLEFFMKP 1003



 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 31/45 (68%), Positives = 42/45 (93%)
 Frame = -1

Query: 138  EELIQMKLMNPKLDINNHNELLSAVRLVVADDQCDGRFVFGRRIP 4
            EELIQ KL+NP LD++ +NELLSAVRL+V++D+C+GRFVFGR++P
Sbjct: 1017 EELIQQKLLNPTLDVHTNNELLSAVRLLVSEDECNGRFVFGRQLP 1061


>emb|CBI15516.3| unnamed protein product [Vitis vinifera]
          Length = 1057

 Score =  218 bits (555), Expect = 7e-55
 Identities = 102/117 (87%), Positives = 111/117 (94%)
 Frame = -2

Query: 626  ESCNTWSHDEHLIRAITCAGLFPGICSVVNKDKSISLKTMEDGSVLLHSNSVNAQEPKIP 447
            E+CN WSHDEHLIRA+ CAGLFPGICSVVNK+KSISLKTMEDG VLL+SNSVNA+EPKIP
Sbjct: 766  EACNKWSHDEHLIRAVICAGLFPGICSVVNKEKSISLKTMEDGQVLLYSNSVNAREPKIP 825

Query: 446  YPWLVFNEKLKVNSVFLRDSTDVSDSVVLLFGGNISRGGLDGHLKMLGGYLEFFMNP 276
            YPWLVFNEK+KVNSVFLRDST VSDS++LLFGG ISRGG+DGHLKMLGGYLEFFM P
Sbjct: 826  YPWLVFNEKVKVNSVFLRDSTAVSDSMLLLFGGRISRGGIDGHLKMLGGYLEFFMKP 882



 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 31/45 (68%), Positives = 42/45 (93%)
 Frame = -1

Query: 138  EELIQMKLMNPKLDINNHNELLSAVRLVVADDQCDGRFVFGRRIP 4
            EELIQ KL+NP LD++ +NELLSAVRL+V++D+C+GRFVFGR++P
Sbjct: 896  EELIQQKLLNPTLDVHTNNELLSAVRLLVSEDECNGRFVFGRQLP 940


>emb|CAN67889.1| hypothetical protein VITISV_013607 [Vitis vinifera]
          Length = 558

 Score =  218 bits (555), Expect = 7e-55
 Identities = 102/117 (87%), Positives = 111/117 (94%)
 Frame = -2

Query: 626 ESCNTWSHDEHLIRAITCAGLFPGICSVVNKDKSISLKTMEDGSVLLHSNSVNAQEPKIP 447
           E+CN WSHDEHLIRA+ CAGLFPGICSVVNK+KSISLKTMEDG VLL+SNSVNA+EPKIP
Sbjct: 267 EACNKWSHDEHLIRAVICAGLFPGICSVVNKEKSISLKTMEDGQVLLYSNSVNAREPKIP 326

Query: 446 YPWLVFNEKLKVNSVFLRDSTDVSDSVVLLFGGNISRGGLDGHLKMLGGYLEFFMNP 276
           YPWLVFNEK+KVNSVFLRDST VSDS++LLFGG ISRGG+DGHLKMLGGYLEFFM P
Sbjct: 327 YPWLVFNEKVKVNSVFLRDSTAVSDSMLLLFGGRISRGGIDGHLKMLGGYLEFFMKP 383



 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 30/45 (66%), Positives = 41/45 (91%)
 Frame = -1

Query: 138 EELIQMKLMNPKLDINNHNELLSAVRLVVADDQCDGRFVFGRRIP 4
           EELIQ KL+NP LD++ +NELLSAVRL+V++D+C+GRFVFG ++P
Sbjct: 397 EELIQQKLLNPTLDVHTNNELLSAVRLLVSEDECNGRFVFGXQLP 441


>ref|XP_002520424.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223540409|gb|EEF41979.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1058

 Score =  208 bits (530), Expect = 6e-52
 Identities = 100/117 (85%), Positives = 108/117 (92%)
 Frame = -2

Query: 626  ESCNTWSHDEHLIRAITCAGLFPGICSVVNKDKSISLKTMEDGSVLLHSNSVNAQEPKIP 447
            E C+  SHDEHLIRAI CAGLFPGICSVVNK+KSI+LKTMEDG VLLHSNSVNA  PKIP
Sbjct: 806  EDCSMLSHDEHLIRAIICAGLFPGICSVVNKEKSITLKTMEDGQVLLHSNSVNAGIPKIP 865

Query: 446  YPWLVFNEKLKVNSVFLRDSTDVSDSVVLLFGGNISRGGLDGHLKMLGGYLEFFMNP 276
            YPWLVFNEK+KVNSVFLRDS+ VSDSV+LLFGG++SRGGLDGHLKMLGGYLEFFM P
Sbjct: 866  YPWLVFNEKVKVNSVFLRDSSGVSDSVLLLFGGDLSRGGLDGHLKMLGGYLEFFMKP 922



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 25/36 (69%), Positives = 33/36 (91%)
 Frame = -1

Query: 138  EELIQMKLMNPKLDINNHNELLSAVRLVVADDQCDG 31
            EELIQ KL++PKLDI +HNELL A+RL+V++DQC+G
Sbjct: 936  EELIQKKLLDPKLDIQSHNELLMAIRLLVSEDQCEG 971


>ref|XP_004160445.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Cucumis
            sativus]
          Length = 1231

 Score =  206 bits (525), Expect = 2e-51
 Identities = 97/117 (82%), Positives = 107/117 (91%)
 Frame = -2

Query: 626  ESCNTWSHDEHLIRAITCAGLFPGICSVVNKDKSISLKTMEDGSVLLHSNSVNAQEPKIP 447
            E CN  +HDEHLIRA+ CAGLFPGICSVVNK+KS++LKTMEDG V+L+SNSVNA  PKIP
Sbjct: 918  EKCNISNHDEHLIRAVICAGLFPGICSVVNKEKSVALKTMEDGQVMLYSNSVNAGYPKIP 977

Query: 446  YPWLVFNEKLKVNSVFLRDSTDVSDSVVLLFGGNISRGGLDGHLKMLGGYLEFFMNP 276
            YPWLVFNEK+KVNSVFLRDST VSDSV+LLFGGN+SRGGLDGHLKML GYLEFFM P
Sbjct: 978  YPWLVFNEKVKVNSVFLRDSTGVSDSVLLLFGGNVSRGGLDGHLKMLDGYLEFFMKP 1034



 Score = 66.2 bits (160), Expect = 5e-09
 Identities = 27/45 (60%), Positives = 38/45 (84%)
 Frame = -1

Query: 138  EELIQMKLMNPKLDINNHNELLSAVRLVVADDQCDGRFVFGRRIP 4
            +EL+  KL+NPKLD+  HNELL+A+RL++++D C GRFVFGR +P
Sbjct: 1048 DELVHQKLLNPKLDMEPHNELLTALRLLISEDHCAGRFVFGRHMP 1092


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