BLASTX nr result
ID: Panax21_contig00015299
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00015299 (478 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI26931.3| unnamed protein product [Vitis vinifera] 92 3e-23 ref|XP_002534507.1| membrane associated ring finger 1,8, putativ... 86 5e-20 ref|XP_002270912.1| PREDICTED: uncharacterized protein LOC100258... 86 3e-19 ref|XP_002280349.2| PREDICTED: uncharacterized protein LOC100259... 96 3e-18 ref|XP_002312427.1| predicted protein [Populus trichocarpa] gi|2... 76 3e-17 >emb|CBI26931.3| unnamed protein product [Vitis vinifera] Length = 277 Score = 92.4 bits (228), Expect(2) = 3e-23 Identities = 42/54 (77%), Positives = 48/54 (88%) Frame = +2 Query: 11 IPMNLRGNWEIARRDLNNPRFIAMVSTDRNFLGTTYDEYADSTSRSLMCCRSVA 172 IP+NLRGNWEI+R +LNNPRFIAMVSTDRNFL Y+E+ STSRS+MCCRSVA Sbjct: 137 IPINLRGNWEISRGELNNPRFIAMVSTDRNFLDPDYNEFTTSTSRSMMCCRSVA 190 Score = 40.8 bits (94), Expect(2) = 3e-23 Identities = 20/36 (55%), Positives = 28/36 (77%) Frame = +1 Query: 160 SFSSCIFILLQTSGIIVSIYIILRAVTAVHRRR*QQ 267 +F + +LL+T+GII+ IYI+LRAVTA+ RR QQ Sbjct: 214 TFPLFMLVLLRTAGIILPIYIMLRAVTAIQRRPRQQ 249 >ref|XP_002534507.1| membrane associated ring finger 1,8, putative [Ricinus communis] gi|223525156|gb|EEF27877.1| membrane associated ring finger 1,8, putative [Ricinus communis] Length = 242 Score = 85.9 bits (211), Expect(2) = 5e-20 Identities = 38/69 (55%), Positives = 50/69 (72%) Frame = +2 Query: 2 LGSIPMNLRGNWEIARRDLNNPRFIAMVSTDRNFLGTTYDEYADSTSRSLMCCRSVAAFL 181 +G +PMN RGNWE +RRDLN PRFIAMVSTD NFL Y+E +++R+L+CCRSV L Sbjct: 124 IGRLPMNFRGNWESSRRDLNGPRFIAMVSTDHNFLNPDYEEEYSASTRNLICCRSVLIAL 183 Query: 182 FSYKLQGLL 208 + G++ Sbjct: 184 LFLRTAGII 192 Score = 36.6 bits (83), Expect(2) = 5e-20 Identities = 16/29 (55%), Positives = 25/29 (86%) Frame = +1 Query: 181 ILLQTSGIIVSIYIILRAVTAVHRRR*QQ 267 + L+T+GII+ I++++RAVTA+ RRR QQ Sbjct: 184 LFLRTAGIILPIFVMVRAVTALQRRRFQQ 212 >ref|XP_002270912.1| PREDICTED: uncharacterized protein LOC100258737 [Vitis vinifera] gi|296087202|emb|CBI33576.3| unnamed protein product [Vitis vinifera] Length = 262 Score = 85.9 bits (211), Expect(2) = 3e-19 Identities = 38/56 (67%), Positives = 45/56 (80%) Frame = +2 Query: 5 GSIPMNLRGNWEIARRDLNNPRFIAMVSTDRNFLGTTYDEYADSTSRSLMCCRSVA 172 G IPMN RGNWE++RRD N+PRFIAMV++DRNFL T DEY SRS++CCR VA Sbjct: 125 GGIPMNFRGNWEVSRRDANHPRFIAMVASDRNFLDTDIDEYPAPNSRSVICCRIVA 180 Score = 33.9 bits (76), Expect(2) = 3e-19 Identities = 15/41 (36%), Positives = 27/41 (65%) Frame = +1 Query: 160 SFSSCIFILLQTSGIIVSIYIILRAVTAVHRRR*QQTINHM 282 SF+ ++L+ GI++ +YI+++A TA RRR QQ ++ Sbjct: 204 SFTLFTLLMLRAIGILLPVYIMVKACTAFQRRRHQQDARNL 244 >ref|XP_002280349.2| PREDICTED: uncharacterized protein LOC100259487 [Vitis vinifera] Length = 240 Score = 95.9 bits (237), Expect = 3e-18 Identities = 44/66 (66%), Positives = 53/66 (80%) Frame = +2 Query: 11 IPMNLRGNWEIARRDLNNPRFIAMVSTDRNFLGTTYDEYADSTSRSLMCCRSVAAFLFSY 190 IP+NLRGNWEI+R +LNNPRFIAMVSTDRNFL Y+E+ STSRS+MCCRSVA L Sbjct: 127 IPINLRGNWEISRGELNNPRFIAMVSTDRNFLDPDYNEFTTSTSRSMMCCRSVAIILVLL 186 Query: 191 KLQGLL 208 + G++ Sbjct: 187 RTAGII 192 >ref|XP_002312427.1| predicted protein [Populus trichocarpa] gi|222852247|gb|EEE89794.1| predicted protein [Populus trichocarpa] Length = 233 Score = 76.3 bits (186), Expect(2) = 3e-17 Identities = 33/53 (62%), Positives = 42/53 (79%) Frame = +2 Query: 14 PMNLRGNWEIARRDLNNPRFIAMVSTDRNFLGTTYDEYADSTSRSLMCCRSVA 172 P+N RGNWE +RR+LN P FIA+VST+RNFL YDEYA ST+R+ + CR +A Sbjct: 127 PVNFRGNWETSRRELNGPHFIAVVSTERNFLNNDYDEYAASTTRNAIYCRLIA 179 Score = 37.0 bits (84), Expect(2) = 3e-17 Identities = 16/32 (50%), Positives = 26/32 (81%) Frame = +1 Query: 157 LSFSSCIFILLQTSGIIVSIYIILRAVTAVHR 252 +SF + + L+T+GII+SIY++L+AVTA+ R Sbjct: 202 ISFPVFMSLFLRTAGIILSIYVMLKAVTAIQR 233