BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015298
         (1108 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280302.1| PREDICTED: exosome complex component RRP41 [...   454   e-125
ref|XP_002530509.1| Exosome complex exonuclease RRP41, putative ...   447   e-123
ref|XP_002320845.1| predicted protein [Populus trichocarpa] gi|1...   445   e-123
ref|XP_003549686.1| PREDICTED: exosome complex component RRP41-l...   444   e-122
ref|XP_003626533.1| Exosome complex exonuclease RRP41 [Medicago ...   442   e-122

>ref|XP_002280302.1| PREDICTED: exosome complex component RRP41 [Vitis vinifera]
            gi|147867252|emb|CAN81194.1| hypothetical protein
            VITISV_022853 [Vitis vinifera]
            gi|297745390|emb|CBI40470.3| unnamed protein product
            [Vitis vinifera]
          Length = 241

 Score =  454 bits (1167), Expect = e-125
 Identities = 228/240 (95%), Positives = 237/240 (98%)
 Frame = -3

Query: 1025 MEFVSPEGLRLDGRRPMEMRQLRVEIGAVAKADGSAVFEMGNTKVIAAVYGPREVQNRSQ 846
            MEFVSPEGLRLDGRRPMEMRQ+R EIGAVAKADGSA FEMGNTKVIAAVYGPREV+NRSQ
Sbjct: 1    MEFVSPEGLRLDGRRPMEMRQIRGEIGAVAKADGSAFFEMGNTKVIAAVYGPREVENRSQ 60

Query: 845  QMNDQALVRCEYSMANFSTGDRMRKPKGDRRSTEISLVIRQTMEACILTHLMPRSQIDIF 666
            Q++DQALVRCEY+MANFSTGDRMRKPKGDRRSTEISLVIRQTMEACILTHLMPRSQIDIF
Sbjct: 61   QISDQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIRQTMEACILTHLMPRSQIDIF 120

Query: 665  VQVLQADGGTRSACINAATLALADAGIPMRDLVTSCSSGYLNSTPLLDLNYVEDSAGGPD 486
            VQVLQADGGTRSACINAATLALADAGIPMRDLVTSCS+GYLNSTPLLDLNYVEDSAGGPD
Sbjct: 121  VQVLQADGGTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLDLNYVEDSAGGPD 180

Query: 485  VTVGILPKSEKVTLLQMDAKLPMDIFENVMQLAVEGCKAVANYIREVLLENTKQLEYRRG 306
            VTVGILPK +KVTLLQMDAKLPMDIFENVMQLA+EGCKA+ANYIREVLLENTKQLEYRRG
Sbjct: 181  VTVGILPKLDKVTLLQMDAKLPMDIFENVMQLAIEGCKAIANYIREVLLENTKQLEYRRG 240


>ref|XP_002530509.1| Exosome complex exonuclease RRP41, putative [Ricinus communis]
            gi|223529966|gb|EEF31893.1| Exosome complex exonuclease
            RRP41, putative [Ricinus communis]
          Length = 241

 Score =  447 bits (1151), Expect = e-123
 Identities = 224/241 (92%), Positives = 236/241 (97%)
 Frame = -3

Query: 1025 MEFVSPEGLRLDGRRPMEMRQLRVEIGAVAKADGSAVFEMGNTKVIAAVYGPREVQNRSQ 846
            ME+VSPEGLRLDGRRPMEMRQLR +IGAV+KADGSAVFEMGNTKVIAAVYGPREVQNRSQ
Sbjct: 1    MEYVSPEGLRLDGRRPMEMRQLRAQIGAVSKADGSAVFEMGNTKVIAAVYGPREVQNRSQ 60

Query: 845  QMNDQALVRCEYSMANFSTGDRMRKPKGDRRSTEISLVIRQTMEACILTHLMPRSQIDIF 666
            Q+ DQALVRCEY+MANFSTGDRMRKPKGDRRSTEISLVIRQTME CILTHLMPRSQIDI+
Sbjct: 61   QIIDQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIRQTMEECILTHLMPRSQIDIY 120

Query: 665  VQVLQADGGTRSACINAATLALADAGIPMRDLVTSCSSGYLNSTPLLDLNYVEDSAGGPD 486
            VQVLQADGGTRSACINAATLALADAGIPMRDLVTSCS+GYLNSTPLLDLNYVEDSAGGPD
Sbjct: 121  VQVLQADGGTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLDLNYVEDSAGGPD 180

Query: 485  VTVGILPKSEKVTLLQMDAKLPMDIFENVMQLAVEGCKAVANYIREVLLENTKQLEYRRG 306
            VTVGILPK +KVTLLQMDAKLP+D FENVMQLAVEGCKA+ANYIRE+LLENTKQLEYRRG
Sbjct: 181  VTVGILPKLDKVTLLQMDAKLPIDTFENVMQLAVEGCKAIANYIREILLENTKQLEYRRG 240

Query: 305  V 303
            +
Sbjct: 241  L 241


>ref|XP_002320845.1| predicted protein [Populus trichocarpa] gi|118489833|gb|ABK96716.1|
            unknown [Populus trichocarpa x Populus deltoides]
            gi|222861618|gb|EEE99160.1| predicted protein [Populus
            trichocarpa]
          Length = 241

 Score =  445 bits (1145), Expect = e-123
 Identities = 224/241 (92%), Positives = 235/241 (97%)
 Frame = -3

Query: 1025 MEFVSPEGLRLDGRRPMEMRQLRVEIGAVAKADGSAVFEMGNTKVIAAVYGPREVQNRSQ 846
            MEFV+PEGLRLDGRRPMEMRQLR +IGAVAKADGSAVFEMGNTKVIAAVYGPREVQNRSQ
Sbjct: 1    MEFVNPEGLRLDGRRPMEMRQLRAQIGAVAKADGSAVFEMGNTKVIAAVYGPREVQNRSQ 60

Query: 845  QMNDQALVRCEYSMANFSTGDRMRKPKGDRRSTEISLVIRQTMEACILTHLMPRSQIDIF 666
            Q+NDQALVRCEYSMANFSTGDR RKPKGDRRSTEISLVIRQ ME CILT+LMPRSQIDI+
Sbjct: 61   QINDQALVRCEYSMANFSTGDRRRKPKGDRRSTEISLVIRQAMEECILTNLMPRSQIDIY 120

Query: 665  VQVLQADGGTRSACINAATLALADAGIPMRDLVTSCSSGYLNSTPLLDLNYVEDSAGGPD 486
            VQVLQADGGTRSACINAATLALADAGIPMRDLVTSCS+G+LNSTPLLDLNYVEDSAGGPD
Sbjct: 121  VQVLQADGGTRSACINAATLALADAGIPMRDLVTSCSAGFLNSTPLLDLNYVEDSAGGPD 180

Query: 485  VTVGILPKSEKVTLLQMDAKLPMDIFENVMQLAVEGCKAVANYIREVLLENTKQLEYRRG 306
            VTVGILPK +KVTLLQMDAKLP+D FENVMQLAVEGCKA+ANYIREVLLENTKQLEYRRG
Sbjct: 181  VTVGILPKLDKVTLLQMDAKLPIDTFENVMQLAVEGCKAIANYIREVLLENTKQLEYRRG 240

Query: 305  V 303
            +
Sbjct: 241  L 241


>ref|XP_003549686.1| PREDICTED: exosome complex component RRP41-like [Glycine max]
          Length = 241

 Score =  444 bits (1142), Expect = e-122
 Identities = 220/241 (91%), Positives = 236/241 (97%)
 Frame = -3

Query: 1025 MEFVSPEGLRLDGRRPMEMRQLRVEIGAVAKADGSAVFEMGNTKVIAAVYGPREVQNRSQ 846
            ME+VSPEGLRLDGRRPMEMRQ+R EIGAV+KADGSA+FEMGNTKVIAAVYGPREVQNR+Q
Sbjct: 1    MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQNRNQ 60

Query: 845  QMNDQALVRCEYSMANFSTGDRMRKPKGDRRSTEISLVIRQTMEACILTHLMPRSQIDIF 666
            Q++  ALVRCEYSMANFSTGDRMRKPKGDRRSTEISLVIRQTMEACILTHL+PRSQIDI+
Sbjct: 61   QISSHALVRCEYSMANFSTGDRMRKPKGDRRSTEISLVIRQTMEACILTHLLPRSQIDIY 120

Query: 665  VQVLQADGGTRSACINAATLALADAGIPMRDLVTSCSSGYLNSTPLLDLNYVEDSAGGPD 486
            VQVLQADGGTRSACINAATLALADAGIPMRDLVTSCS+GYLNSTPLLDLNYVEDSAGGPD
Sbjct: 121  VQVLQADGGTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLDLNYVEDSAGGPD 180

Query: 485  VTVGILPKSEKVTLLQMDAKLPMDIFENVMQLAVEGCKAVANYIREVLLENTKQLEYRRG 306
            VT+GILPK +KVTLLQMD+KLP+DI ENVMQLA+EGCKA+ANYIREVLLENTKQLEYRRG
Sbjct: 181  VTLGILPKLDKVTLLQMDSKLPIDILENVMQLAIEGCKAIANYIREVLLENTKQLEYRRG 240

Query: 305  V 303
            V
Sbjct: 241  V 241


>ref|XP_003626533.1| Exosome complex exonuclease RRP41 [Medicago truncatula]
            gi|355501548|gb|AES82751.1| Exosome complex exonuclease
            RRP41 [Medicago truncatula]
          Length = 241

 Score =  442 bits (1136), Expect = e-122
 Identities = 220/240 (91%), Positives = 233/240 (97%)
 Frame = -3

Query: 1025 MEFVSPEGLRLDGRRPMEMRQLRVEIGAVAKADGSAVFEMGNTKVIAAVYGPREVQNRSQ 846
            ME+VSPEGLR DGRRPMEMRQ+R EIGAV+KADGSA+FEMGNTKVIAAVYGPREVQNRSQ
Sbjct: 1    MEYVSPEGLRSDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQNRSQ 60

Query: 845  QMNDQALVRCEYSMANFSTGDRMRKPKGDRRSTEISLVIRQTMEACILTHLMPRSQIDIF 666
            QM+D+ALVRCEYSMANFSTGDRMRKPKGDRRSTEISLVIRQTME CILTHLMPRSQIDI+
Sbjct: 61   QMSDKALVRCEYSMANFSTGDRMRKPKGDRRSTEISLVIRQTMEECILTHLMPRSQIDIY 120

Query: 665  VQVLQADGGTRSACINAATLALADAGIPMRDLVTSCSSGYLNSTPLLDLNYVEDSAGGPD 486
            VQVLQADGGTRSACINAATLALADAGIPM DLVTSCS+GYLNSTPLLDLNYVEDSAGGPD
Sbjct: 121  VQVLQADGGTRSACINAATLALADAGIPMLDLVTSCSAGYLNSTPLLDLNYVEDSAGGPD 180

Query: 485  VTVGILPKSEKVTLLQMDAKLPMDIFENVMQLAVEGCKAVANYIREVLLENTKQLEYRRG 306
            VTVGILPK +KVTLLQMD+KLP+DI ENVMQLA EGCKA+ANYIRE+LLENTKQLEYRRG
Sbjct: 181  VTVGILPKLDKVTLLQMDSKLPIDILENVMQLATEGCKAIANYIREILLENTKQLEYRRG 240