BLASTX nr result

ID: Panax21_contig00015285 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015285
         (933 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265695.1| PREDICTED: psbP domain-containing protein 4,...   365   8e-99
ref|XP_002300943.1| predicted protein [Populus trichocarpa] gi|2...   363   2e-98
ref|XP_002526176.1| Thylakoid lumenal 29.8 kDa protein, chloropl...   363   4e-98
ref|XP_004139653.1| PREDICTED: psbP domain-containing protein 4,...   338   8e-91
ref|XP_003526671.1| PREDICTED: psbP domain-containing protein 4,...   334   2e-89

>ref|XP_002265695.1| PREDICTED: psbP domain-containing protein 4, chloroplastic [Vitis
           vinifera] gi|302142754|emb|CBI19957.3| unnamed protein
           product [Vitis vinifera]
          Length = 279

 Score =  365 bits (937), Expect = 8e-99
 Identities = 190/260 (73%), Positives = 214/260 (82%), Gaps = 8/260 (3%)
 Frame = +1

Query: 178 MGTIVFNIFCFSSKYNQQMVHSH------CVGKGLSRTRVSAAISRENG--EFLHEESDG 333
           MGT +F    FS + +  ++ SH         KGLS  + +A  +R+NG  EF+ EE++ 
Sbjct: 1   MGTSIFTSCSFSWRNHHHIIPSHRFLSHSSPDKGLSVAK-AAVDTRQNGCVEFVDEETEK 59

Query: 334 SFGILRRRSALVSGVSLISSAVLDFPGESLAVVKQGLLAGRIPGLSEPDEQGWRTYRRPD 513
             G L+RRSA+VSGVSLISSAVL FP E LAVVKQGLLAGR+PGLSEPDEQGWRTYRRPD
Sbjct: 60  FSGFLKRRSAIVSGVSLISSAVLGFPREGLAVVKQGLLAGRVPGLSEPDEQGWRTYRRPD 119

Query: 514 EKSGGHGVGWSPIIPYLFSVPQEWEEVPVSIADLGGTEIDLRFGNPKEGRLFVIVAPVLR 693
           EKSGGHGVGWSPIIPY+FSVP  WEEVPVSIADLGGTEIDLRF N KEGRLFVIVAPVLR
Sbjct: 120 EKSGGHGVGWSPIIPYIFSVPSGWEEVPVSIADLGGTEIDLRFANSKEGRLFVIVAPVLR 179

Query: 694 FADNLGENATIEKVGTPEKVINAFGPEVIGENVEDKVLSIEVKEYSGRKYYQFELEPPHA 873
           FADNLG++A +EK+G PEKVI AFGPEVIGENVE KVLS+ V E+SGR YYQFELEPPH 
Sbjct: 180 FADNLGDDAKVEKIGPPEKVIAAFGPEVIGENVEGKVLSMGVVEHSGRTYYQFELEPPHV 239

Query: 874 LITATAAGNRLYLFNVTANG 933
           LITATAAGNRLYLF+VTA+G
Sbjct: 240 LITATAAGNRLYLFSVTASG 259


>ref|XP_002300943.1| predicted protein [Populus trichocarpa] gi|222842669|gb|EEE80216.1|
           predicted protein [Populus trichocarpa]
          Length = 276

 Score =  363 bits (933), Expect = 2e-98
 Identities = 189/258 (73%), Positives = 213/258 (82%), Gaps = 6/258 (2%)
 Frame = +1

Query: 178 MGTIVFNIFCFSSKYNQQMVH------SHCVGKGLSRTRVSAAISRENGEFLHEESDGSF 339
           MGT +        +Y+ Q +       SH      SR +++A  SR+NG FL  E++ S 
Sbjct: 1   MGTTLLTSCGIQWRYHHQQIVPDNHLLSHSQESFPSRAKITAE-SRKNG-FLDGENEKSA 58

Query: 340 GILRRRSALVSGVSLISSAVLDFPGESLAVVKQGLLAGRIPGLSEPDEQGWRTYRRPDEK 519
           G L+RRS LVSGVSL+S++VL   GE LAVVKQGLLAGRIPGLSEPD+QGWRTYRRPD+K
Sbjct: 59  GFLKRRSVLVSGVSLVSTSVLGSAGEGLAVVKQGLLAGRIPGLSEPDDQGWRTYRRPDDK 118

Query: 520 SGGHGVGWSPIIPYLFSVPQEWEEVPVSIADLGGTEIDLRFGNPKEGRLFVIVAPVLRFA 699
           SGGHGVGWSPIIPYLFSVPQ WEEVPVSIADLGGTEIDLRFG+ KEGRLFVIVAPVLRFA
Sbjct: 119 SGGHGVGWSPIIPYLFSVPQGWEEVPVSIADLGGTEIDLRFGSSKEGRLFVIVAPVLRFA 178

Query: 700 DNLGENATIEKVGTPEKVINAFGPEVIGENVEDKVLSIEVKEYSGRKYYQFELEPPHALI 879
           D LGENATIE++G PEKVINAFGPEVIGENVE KVLS+ V+E+SGR+YYQ+ELEPPHALI
Sbjct: 179 DYLGENATIEQIGPPEKVINAFGPEVIGENVEGKVLSMNVEEHSGRRYYQYELEPPHALI 238

Query: 880 TATAAGNRLYLFNVTANG 933
           TATAAGNRLYLFNVT NG
Sbjct: 239 TATAAGNRLYLFNVTGNG 256


>ref|XP_002526176.1| Thylakoid lumenal 29.8 kDa protein, chloroplast precursor, putative
           [Ricinus communis] gi|223534553|gb|EEF36252.1| Thylakoid
           lumenal 29.8 kDa protein, chloroplast precursor,
           putative [Ricinus communis]
          Length = 270

 Score =  363 bits (931), Expect = 4e-98
 Identities = 186/254 (73%), Positives = 205/254 (80%), Gaps = 2/254 (0%)
 Frame = +1

Query: 178 MGTIVFNIFCFSSKYN-QQMV-HSHCVGKGLSRTRVSAAISRENGEFLHEESDGSFGILR 351
           MGT +F    F  KY+ QQMV  SH +G     T     +SR        E +   G+L+
Sbjct: 1   MGTTIFTSCSFPWKYHHQQMVPSSHLLGHSSQET----GVSRIRATIEPREFEKPIGLLK 56

Query: 352 RRSALVSGVSLISSAVLDFPGESLAVVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGH 531
           RRSALVSG+SL SS +L FPG+ LA VKQGLLAGRIPGLSEPDEQGWRTYRRPD+KSGGH
Sbjct: 57  RRSALVSGISLASSTILGFPGDGLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDDKSGGH 116

Query: 532 GVGWSPIIPYLFSVPQEWEEVPVSIADLGGTEIDLRFGNPKEGRLFVIVAPVLRFADNLG 711
           GVGWSPIIPY F VPQEWEEVPVSIADLGGTEIDLRF + KEGRLFVIVAPVLRFAD+LG
Sbjct: 117 GVGWSPIIPYAFKVPQEWEEVPVSIADLGGTEIDLRFSSSKEGRLFVIVAPVLRFADDLG 176

Query: 712 ENATIEKVGTPEKVINAFGPEVIGENVEDKVLSIEVKEYSGRKYYQFELEPPHALITATA 891
           +NATIE++G PEKVINAFGPEVIGENVE KVLS+ V E+SGR YYQFELEPPH LITATA
Sbjct: 177 DNATIERIGPPEKVINAFGPEVIGENVEGKVLSMNVAEHSGRMYYQFELEPPHVLITATA 236

Query: 892 AGNRLYLFNVTANG 933
           AGNRLYLF+VT NG
Sbjct: 237 AGNRLYLFSVTGNG 250


>ref|XP_004139653.1| PREDICTED: psbP domain-containing protein 4, chloroplastic-like
           [Cucumis sativus] gi|449475456|ref|XP_004154459.1|
           PREDICTED: psbP domain-containing protein 4,
           chloroplastic-like [Cucumis sativus]
          Length = 267

 Score =  338 bits (868), Expect = 8e-91
 Identities = 179/253 (70%), Positives = 198/253 (78%), Gaps = 1/253 (0%)
 Frame = +1

Query: 178 MGTIVFNIFCFSSKYNQQMVHS-HCVGKGLSRTRVSAAISRENGEFLHEESDGSFGILRR 354
           MGT +F    FSS ++ Q + S H         RVSA          H ++  S   L R
Sbjct: 1   MGTTLFITNPFSSIFHHQYLPSPHLPPHHFLPKRVSAVHGA------HNQNPISSTALNR 54

Query: 355 RSALVSGVSLISSAVLDFPGESLAVVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHG 534
           R ALVSGVSL+SSA L    + LA VKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHG
Sbjct: 55  RWALVSGVSLLSSAALGLQNDCLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHG 114

Query: 535 VGWSPIIPYLFSVPQEWEEVPVSIADLGGTEIDLRFGNPKEGRLFVIVAPVLRFADNLGE 714
           VGWSPIIPY FSVPQ+WEEVPVSIADLGGTEIDLRFG+ KEGR+FV+VAPV RF+D +GE
Sbjct: 115 VGWSPIIPYAFSVPQDWEEVPVSIADLGGTEIDLRFGSLKEGRVFVVVAPVRRFSDVIGE 174

Query: 715 NATIEKVGTPEKVINAFGPEVIGENVEDKVLSIEVKEYSGRKYYQFELEPPHALITATAA 894
           +ATIE VG PEKVINAFGPEVIGENVE KV+S+ V E+SGR YYQFELEPPH +ITATAA
Sbjct: 175 DATIEMVGPPEKVINAFGPEVIGENVEGKVISMSVAEHSGRTYYQFELEPPHVIITATAA 234

Query: 895 GNRLYLFNVTANG 933
           GNRLYLFNVTANG
Sbjct: 235 GNRLYLFNVTANG 247


>ref|XP_003526671.1| PREDICTED: psbP domain-containing protein 4, chloroplastic-like
           [Glycine max]
          Length = 271

 Score =  334 bits (856), Expect = 2e-89
 Identities = 171/231 (74%), Positives = 189/231 (81%)
 Frame = +1

Query: 241 SHCVGKGLSRTRVSAAISRENGEFLHEESDGSFGILRRRSALVSGVSLISSAVLDFPGES 420
           S  +  G  RT V+A+ S++N     E+   S  ++ RR+ L SGVSL     L FPGES
Sbjct: 27  SQTLQNGTLRTDVTASASKDNISIESEKCCSSL-LVNRRTVLASGVSL-----LGFPGES 80

Query: 421 LAVVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYLFSVPQEWEEVPV 600
           LAVVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPY F VP+EWEEVPV
Sbjct: 81  LAVVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYSFRVPKEWEEVPV 140

Query: 601 SIADLGGTEIDLRFGNPKEGRLFVIVAPVLRFADNLGENATIEKVGTPEKVINAFGPEVI 780
           SIADLGGTEIDLRF + KEGRLFVIVAPVLRF+D+LG+NATIEK+G PEKVINAFGPE+I
Sbjct: 141 SIADLGGTEIDLRFASSKEGRLFVIVAPVLRFSDDLGDNATIEKIGPPEKVINAFGPEMI 200

Query: 781 GENVEDKVLSIEVKEYSGRKYYQFELEPPHALITATAAGNRLYLFNVTANG 933
           GENVE KVLS  V E+ GR YYQFELEPPH  ITATAAGNRLYLF VT +G
Sbjct: 201 GENVEGKVLSANVAEHEGRTYYQFELEPPHIFITATAAGNRLYLFGVTGSG 251


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