BLASTX nr result
ID: Panax21_contig00015277
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00015277 (370 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002280897.1| PREDICTED: zinc finger CCCH domain-containin... 89 4e-16 ref|XP_002520438.1| RNA binding motif protein, putative [Ricinus... 79 5e-13 ref|XP_004144722.1| PREDICTED: zinc finger CCCH domain-containin... 75 6e-12 ref|XP_002314129.1| predicted protein [Populus trichocarpa] gi|2... 73 2e-11 ref|XP_002314127.1| predicted protein [Populus trichocarpa] gi|2... 73 2e-11 >ref|XP_002280897.1| PREDICTED: zinc finger CCCH domain-containing protein 49-like [Vitis vinifera] Length = 474 Score = 89.0 bits (219), Expect = 4e-16 Identities = 38/48 (79%), Positives = 43/48 (89%) Frame = -1 Query: 370 QIVQPPGNQDQAPQPMHYFNIPPPPPLQERTYYPSMDPQRMGAVIPSQ 227 Q++QPPG QDQ P PMHYFNIPPPP QERT+YPSMDPQRMGA++PSQ Sbjct: 337 QVIQPPGTQDQPPPPMHYFNIPPPPQ-QERTFYPSMDPQRMGALVPSQ 383 >ref|XP_002520438.1| RNA binding motif protein, putative [Ricinus communis] gi|223540280|gb|EEF41851.1| RNA binding motif protein, putative [Ricinus communis] Length = 285 Score = 78.6 bits (192), Expect = 5e-13 Identities = 37/46 (80%), Positives = 39/46 (84%) Frame = -1 Query: 364 VQPPGNQDQAPQPMHYFNIPPPPPLQERTYYPSMDPQRMGAVIPSQ 227 + P G QDQ P PMHYFNIPPPP QERTYYPSMDPQRMGAV+PSQ Sbjct: 156 LHPAGTQDQPP-PMHYFNIPPPPQ-QERTYYPSMDPQRMGAVVPSQ 199 >ref|XP_004144722.1| PREDICTED: zinc finger CCCH domain-containing protein 40-like [Cucumis sativus] gi|449525922|ref|XP_004169965.1| PREDICTED: zinc finger CCCH domain-containing protein 40-like [Cucumis sativus] Length = 517 Score = 75.1 bits (183), Expect = 6e-12 Identities = 32/43 (74%), Positives = 36/43 (83%) Frame = -1 Query: 364 VQPPGNQDQAPQPMHYFNIPPPPPLQERTYYPSMDPQRMGAVI 236 + PPG DQ PQ MHYFNIPPPPP QER +YPSMDPQRMGA++ Sbjct: 337 LHPPGTHDQ-PQAMHYFNIPPPPPQQERAFYPSMDPQRMGALV 378 >ref|XP_002314129.1| predicted protein [Populus trichocarpa] gi|222850537|gb|EEE88084.1| predicted protein [Populus trichocarpa] Length = 531 Score = 73.2 bits (178), Expect = 2e-11 Identities = 34/46 (73%), Positives = 38/46 (82%) Frame = -1 Query: 364 VQPPGNQDQAPQPMHYFNIPPPPPLQERTYYPSMDPQRMGAVIPSQ 227 + PPG QDQ P PMHYFNIPPPP QER +YPSMDPQRMGA++ SQ Sbjct: 338 LNPPGTQDQHP-PMHYFNIPPPPQ-QERAFYPSMDPQRMGALVGSQ 381 >ref|XP_002314127.1| predicted protein [Populus trichocarpa] gi|222850535|gb|EEE88082.1| predicted protein [Populus trichocarpa] Length = 531 Score = 73.2 bits (178), Expect = 2e-11 Identities = 34/46 (73%), Positives = 38/46 (82%) Frame = -1 Query: 364 VQPPGNQDQAPQPMHYFNIPPPPPLQERTYYPSMDPQRMGAVIPSQ 227 + PPG QDQ P PMHYFNIPPPP QER +YPSMDPQRMGA++ SQ Sbjct: 338 LNPPGTQDQHP-PMHYFNIPPPPQ-QERAFYPSMDPQRMGALVGSQ 381