BLASTX nr result

ID: Panax21_contig00015258 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015258
         (999 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278108.2| PREDICTED: pumilio homolog 1-like [Vitis vin...   191   3e-46
ref|XP_002524201.1| pumilio, putative [Ricinus communis] gi|2235...   182   8e-44
ref|XP_002524200.1| pumilio, putative [Ricinus communis] gi|2235...   179   9e-43
ref|XP_002311179.1| predicted protein [Populus trichocarpa] gi|2...   176   6e-42
ref|XP_002316273.1| predicted protein [Populus trichocarpa] gi|2...   161   3e-37

>ref|XP_002278108.2| PREDICTED: pumilio homolog 1-like [Vitis vinifera]
          Length = 1015

 Score =  191 bits (484), Expect = 3e-46
 Identities = 119/261 (45%), Positives = 146/261 (55%), Gaps = 28/261 (10%)
 Frame = +2

Query: 296 ITDSYSKMVSDFGMQSML-QSNNNEELGFLLREQKRQQ-EMSERERELNMYRSGSAPPTV 469
           ITD+YSKM+SD GM+SM   +   E+LG L+REQ+RQ+   S+RE+EL++YRSGSAPPTV
Sbjct: 2   ITDTYSKMMSDIGMRSMPGNAEYREDLGLLIREQRRQEVAASDREKELSIYRSGSAPPTV 61

Query: 470 EXXXXXXXXXXXXXXXX-----ISEEELRSDPAYISYYYANVXXXXXXXXXXXXKEDWRY 634
           E                      SEEELR+DPAY++YYY+NV            KEDWR+
Sbjct: 62  EGSLSAVGGLFGGGGDGSDTGFASEEELRADPAYVNYYYSNVNLNPRLPPPRLSKEDWRF 121

Query: 635 SQRLQGGGSSA-----------IGDRRKVNSDDGGNGGRSLFTMQPE-KAHQDSNXXXXX 778
           +QRL GGG+             IGDRRKV     GNG  SLF MQP     +D N     
Sbjct: 122 AQRLHGGGAGGGGSGSSSSVGGIGDRRKVGRGGDGNGS-SLFLMQPGFNGQKDENGAESR 180

Query: 779 XXXXXXXXXXXX---------SRQKCVAEIIQNDTTHATSAPRHPSRSTSHNAFDDSVEP 931
                                SRQK +AEIIQ+D  HATS  RHPSR  S NAFDD+VE 
Sbjct: 181 KAQGVEWGGDGLIGLPGLGLGSRQKSLAEIIQDDIGHATSVSRHPSRPASRNAFDDNVET 240

Query: 932 SELHYSQLQQELVTMDAVHAG 994
           SE  +S L  EL +MDA+ +G
Sbjct: 241 SEAQFSHLHHELASMDALRSG 261


>ref|XP_002524201.1| pumilio, putative [Ricinus communis] gi|223536478|gb|EEF38125.1|
           pumilio, putative [Ricinus communis]
          Length = 999

 Score =  182 bits (463), Expect = 8e-44
 Identities = 114/256 (44%), Positives = 148/256 (57%), Gaps = 22/256 (8%)
 Frame = +2

Query: 296 ITDSYSKMVSDFGMQSMLQSNNNEELGFLLREQKRQQE-MSERERELNMYRSGSAPPTVE 472
           ITD+YSK++ D  M+SML+   NE+L  L+REQ+ QQE +S+RE+ELN+YRSGSAPPTVE
Sbjct: 2   ITDTYSKILPDISMRSMLK---NEDLSKLIREQRLQQEAVSDREKELNIYRSGSAPPTVE 58

Query: 473 XXXXXXXXXXXXXXXX-----------ISEEELRSDPAYISYYYANVXXXXXXXXXXXXK 619
                                      +SEEE+RSDPAY++YYY+NV            K
Sbjct: 59  GSLNSIGGLFSATELAGIAKSNSKGGFLSEEEIRSDPAYVNYYYSNVNLNPRLPPPLLSK 118

Query: 620 EDWRYSQRLQGGG---SSAIGDRRKVNSDDGGN-GGRSLFTMQP------EKAHQDSNXX 769
           EDWR++QRL GGG   +SA+GDRRK +S  G N G RSLF +QP      E+        
Sbjct: 119 EDWRFAQRLHGGGAEVNSAVGDRRKGSSRGGENEGNRSLFAVQPGFGGGNEENGNGGGVE 178

Query: 770 XXXXXXXXXXXXXXXSRQKCVAEIIQNDTTHATSAPRHPSRSTSHNAFDDSVEPSELHYS 949
                          SRQK +AEI Q+D +HA S  RHPSR +S NAFDD V+ SE  ++
Sbjct: 179 WGGDGLIGLPGLGLGSRQKSIAEIFQDDMSHANSTSRHPSRPSSRNAFDDDVDNSEPQFA 238

Query: 950 QLQQELVTMDAVHAGA 997
           QL   L + DA+ + A
Sbjct: 239 QL-HNLTSSDALRSVA 253


>ref|XP_002524200.1| pumilio, putative [Ricinus communis] gi|223536477|gb|EEF38124.1|
           pumilio, putative [Ricinus communis]
          Length = 1011

 Score =  179 bits (454), Expect = 9e-43
 Identities = 113/255 (44%), Positives = 144/255 (56%), Gaps = 21/255 (8%)
 Frame = +2

Query: 296 ITDSYSKMVSDFGMQSMLQSNNNEELGFLLREQKRQQEM-SERERELNMYRSGSAPPTVE 472
           ITD+YSK++ D  M+SMLQ   NE+   L+REQ+ QQE  S+RE+ELN+YRSGSAPPTVE
Sbjct: 2   ITDTYSKILPDISMRSMLQ---NEDFSKLIREQRLQQEAASDREKELNIYRSGSAPPTVE 58

Query: 473 XXXXXXXXXXXXXXXX-----------ISEEELRSDPAYISYYYANVXXXXXXXXXXXXK 619
                                      +SEEE+RSDPAY++YYY+NV            K
Sbjct: 59  GSLNSIGGLFDTTGLAGIANTNSKGGFLSEEEIRSDPAYVNYYYSNVNLNPRLPPPVLSK 118

Query: 620 EDWRYSQRLQGGG--SSAIGDRRKVNSDDGGN-GGRSLFTMQP------EKAHQDSNXXX 772
           EDWR++QRL GG   +SA+GDRRK +S  G N G RSLF +QP      E+         
Sbjct: 119 EDWRFAQRLHGGAGVNSAVGDRRKGSSSCGENEGNRSLFAVQPGVGGGNEENGNGGGVEW 178

Query: 773 XXXXXXXXXXXXXXSRQKCVAEIIQNDTTHATSAPRHPSRSTSHNAFDDSVEPSELHYSQ 952
                         SRQK +AEIIQ+D +HA    RHPSR  S NAFDD V+ SE  ++Q
Sbjct: 179 GGDGLIGLPGLGLGSRQKSIAEIIQDDMSHANPTSRHPSRPASRNAFDDDVDNSEPQFAQ 238

Query: 953 LQQELVTMDAVHAGA 997
           L   L + DA+ + A
Sbjct: 239 L-HNLTSSDALRSVA 252


>ref|XP_002311179.1| predicted protein [Populus trichocarpa] gi|222850999|gb|EEE88546.1|
           predicted protein [Populus trichocarpa]
          Length = 999

 Score =  176 bits (447), Expect = 6e-42
 Identities = 108/254 (42%), Positives = 140/254 (55%), Gaps = 20/254 (7%)
 Frame = +2

Query: 296 ITDSYSKMVSDFGMQSMLQSNNNEELGFLLREQKRQQEM-SERERELNMYRSGSAPPTVE 472
           ITD+YSK++ D   +SML+   NE+L  L+REQ+ QQE  SE E+ELN+YRSGSAPPTVE
Sbjct: 2   ITDTYSKVLPDISKRSMLK---NEDLSKLIREQRLQQEATSEIEKELNIYRSGSAPPTVE 58

Query: 473 ----------XXXXXXXXXXXXXXXXISEEELRSDPAYISYYYANVXXXXXXXXXXXXKE 622
                                      SEE LRSDPAY++YYY+NV            KE
Sbjct: 59  GSLSSIGGLFDGTGIPGIKNSNRGGFSSEEVLRSDPAYVNYYYSNVNLNPRLPPPSLSKE 118

Query: 623 DWRYSQRLQ---GGGSSAIGDRRKVNSDDGGNGGRSLFTMQP------EKAHQDSNXXXX 775
           DWR++QRL    GG +S +GDRR+ +      G RSLF +QP      E+   ++     
Sbjct: 119 DWRFAQRLHGSGGGSNSVVGDRRRGSRGGENEGHRSLFAVQPGFGGGMEENGNENGVEWG 178

Query: 776 XXXXXXXXXXXXXSRQKCVAEIIQNDTTHATSAPRHPSRSTSHNAFDDSVEPSELHYSQL 955
                        SRQK +AEIIQND  HA    RHPSR  S NAFDD +E SE  +SQL
Sbjct: 179 GDGLIGLPGLGLGSRQKSIAEIIQNDMGHANPISRHPSRPASRNAFDDDMETSEAQFSQL 238

Query: 956 QQELVTMDAVHAGA 997
             +L ++DA+ + +
Sbjct: 239 HGDLASLDALRSSS 252


>ref|XP_002316273.1| predicted protein [Populus trichocarpa] gi|222865313|gb|EEF02444.1|
           predicted protein [Populus trichocarpa]
          Length = 938

 Score =  161 bits (407), Expect = 3e-37
 Identities = 98/219 (44%), Positives = 119/219 (54%), Gaps = 20/219 (9%)
 Frame = +2

Query: 365 EELGFLLREQKRQQEM-SERERELNMYRSGSAPPTVEXXXXXXXXXXXXXXXX------- 520
           EEL  L+REQ+ QQE  SERE+ELN+YRSGSAPPTVE                       
Sbjct: 1   EELNKLIREQRLQQEAASEREKELNIYRSGSAPPTVEGSLSSIGGLFDGTGIPGIKKSNK 60

Query: 521 ---ISEEELRSDPAYISYYYANVXXXXXXXXXXXXKEDWRYSQRLQG---GGSSAIGDRR 682
              +SEE+ RSDPAY++YYY+NV            KEDWR++QRL G   G +S +GDR 
Sbjct: 61  GEFLSEEDFRSDPAYVNYYYSNVNLNPRLPPPLLSKEDWRFAQRLHGSSGGSNSVVGDRS 120

Query: 683 KVNSDDGGNGGRSLFTMQP------EKAHQDSNXXXXXXXXXXXXXXXXXSRQKCVAEII 844
           K +      G RSLF +QP      E+    +                  SRQK +AEII
Sbjct: 121 KGSRGGDNEGQRSLFAVQPGFGGGQEENGNGNGVEWGGDGLIGLPGFGLGSRQKSIAEII 180

Query: 845 QNDTTHATSAPRHPSRSTSHNAFDDSVEPSELHYSQLQQ 961
           Q+D  HA    RHPSR TS NAFDD+VE SE H+SQL Q
Sbjct: 181 QDDMGHANPISRHPSRPTSRNAFDDNVETSEAHFSQLLQ 219


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