BLASTX nr result

ID: Panax21_contig00015234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015234
         (1008 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521976.1| transcription factor, putative [Ricinus comm...    77   4e-23
ref|XP_003555549.1| PREDICTED: probable lysine-specific demethyl...    65   1e-17
ref|XP_003535393.1| PREDICTED: probable lysine-specific demethyl...    64   9e-17
ref|XP_002319654.1| jumonji domain protein [Populus trichocarpa]...    75   6e-16
ref|XP_002266063.2| PREDICTED: probable lysine-specific demethyl...    70   6e-10

>ref|XP_002521976.1| transcription factor, putative [Ricinus communis]
            gi|223538780|gb|EEF40380.1| transcription factor,
            putative [Ricinus communis]
          Length = 1202

 Score = 76.6 bits (187), Expect(2) = 4e-23
 Identities = 37/56 (66%), Positives = 44/56 (78%), Gaps = 4/56 (7%)
 Frame = +3

Query: 3    SLDGMEMFGFSLPAIVQVIQSMDRNRVCTEYWKSRPFM----QIPQHSQQPQNNNG 158
            SLDG+EMFGFS PAIVQVI+++DRNRVCT+YW SRP+     QIPQ SQ  + N G
Sbjct: 1072 SLDGLEMFGFSSPAIVQVIEALDRNRVCTDYWDSRPYSRPQGQIPQPSQLIKGNGG 1127



 Score = 58.5 bits (140), Expect(2) = 4e-23
 Identities = 32/53 (60%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
 Frame = +2

Query: 269  LPAGVDTVISGLFKKAIPEELQSLLTILNNNNPSS--GRYLVTSLLNEEIHRR 421
            LP  VDT++ GLFKKA PEEL SL  ILN+  P++   R L+T LLNEEI RR
Sbjct: 1148 LPNAVDTILRGLFKKANPEELYSLNQILNDGGPTTRVDRGLITKLLNEEIKRR 1200


>ref|XP_003555549.1| PREDICTED: probable lysine-specific demethylase JMJ14-like [Glycine
            max]
          Length = 1257

 Score = 64.7 bits (156), Expect(2) = 1e-17
 Identities = 32/53 (60%), Positives = 37/53 (69%), Gaps = 4/53 (7%)
 Frame = +3

Query: 3    SLDGMEMFGFSLPAIVQVIQSMDRNRVCTEYWKSRPFM----QIPQHSQQPQN 149
            SLDG EMFGFS PAIVQ I+++DR R+C EYW SRP+     QI Q SQ   N
Sbjct: 1139 SLDGFEMFGFSSPAIVQAIEALDRTRLCNEYWDSRPYSRPQGQISQSSQTNVN 1191



 Score = 52.0 bits (123), Expect(2) = 1e-17
 Identities = 26/50 (52%), Positives = 33/50 (66%)
 Frame = +2

Query: 269  LPAGVDTVISGLFKKAIPEELQSLLTILNNNNPSSGRYLVTSLLNEEIHR 418
            +P  V  V+  LFKK+  EEL  L +IL+NN P + R LV  LLNEEIH+
Sbjct: 1204 MPVEVVAVLRSLFKKSNAEELNLLYSILSNNRPEADRNLVAQLLNEEIHK 1253


>ref|XP_003535393.1| PREDICTED: probable lysine-specific demethylase JMJ14-like [Glycine
            max]
          Length = 1257

 Score = 63.9 bits (154), Expect(2) = 9e-17
 Identities = 31/51 (60%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
 Frame = +3

Query: 3    SLDGMEMFGFSLPAIVQVIQSMDRNRVCTEYWKSRPFMQIP-QHSQQPQNN 152
            SLDG EMFGFS PAIVQ I+++DR+R+C EYW SRP+ +   Q SQ  Q N
Sbjct: 1139 SLDGFEMFGFSSPAIVQAIEALDRSRLCNEYWDSRPYSRPQGQISQSIQTN 1189



 Score = 49.7 bits (117), Expect(2) = 9e-17
 Identities = 24/50 (48%), Positives = 33/50 (66%)
 Frame = +2

Query: 269  LPAGVDTVISGLFKKAIPEELQSLLTILNNNNPSSGRYLVTSLLNEEIHR 418
            +P  V  V+  LFKK+  EEL  L +IL++N P + R LV  LLNEE+H+
Sbjct: 1204 MPVEVVAVLRSLFKKSNAEELNLLYSILSDNRPEADRNLVAQLLNEEVHK 1253


>ref|XP_002319654.1| jumonji domain protein [Populus trichocarpa]
           gi|222858030|gb|EEE95577.1| jumonji domain protein
           [Populus trichocarpa]
          Length = 923

 Score = 75.5 bits (184), Expect(2) = 6e-16
 Identities = 36/53 (67%), Positives = 41/53 (77%), Gaps = 4/53 (7%)
 Frame = +3

Query: 3   SLDGMEMFGFSLPAIVQVIQSMDRNRVCTEYWKSRPFM----QIPQHSQQPQN 149
           SLDG EMFGFS PAIVQ I+++DRNRVCT+YW SRP+     QIPQHSQ   N
Sbjct: 820 SLDGFEMFGFSSPAIVQAIEALDRNRVCTDYWDSRPYSRPQGQIPQHSQSIVN 872



 Score = 35.4 bits (80), Expect(2) = 6e-16
 Identities = 17/29 (58%), Positives = 21/29 (72%)
 Frame = +2

Query: 269 LPAGVDTVISGLFKKAIPEELQSLLTILN 355
           LP   DT++ GLFKKA PEEL +L  IL+
Sbjct: 894 LPVEADTILRGLFKKASPEELIALSHILS 922


>ref|XP_002266063.2| PREDICTED: probable lysine-specific demethylase JMJ14-like [Vitis
            vinifera]
          Length = 1271

 Score = 70.5 bits (171), Expect = 6e-10
 Identities = 32/45 (71%), Positives = 37/45 (82%)
 Frame = +3

Query: 3    SLDGMEMFGFSLPAIVQVIQSMDRNRVCTEYWKSRPFMQIPQHSQ 137
            SLDG+EMFGFS P I+Q +++MDRNRVCTEYW SRP   I QHSQ
Sbjct: 1150 SLDGLEMFGFSSPTIMQAVEAMDRNRVCTEYWNSRPL--IAQHSQ 1192



 Score = 60.1 bits (144), Expect = 8e-07
 Identities = 31/51 (60%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
 Frame = +2

Query: 272  PAGVDTVISGLFKKAIPEELQSLLTILNNNN-PSSGRYLVTSLLNEEIHRR 421
            P GVDT++ GLF KA PEEL SL +ILN+N+ P+    LVT LL+EEIH+R
Sbjct: 1219 PVGVDTILRGLFMKANPEELHSLYSILNDNSRPTGDGGLVTRLLSEEIHKR 1269


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