BLASTX nr result

ID: Panax21_contig00015207 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015207
         (1079 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276597.2| PREDICTED: transportin-3-like [Vitis vinifer...   479   e-133
emb|CAN65470.1| hypothetical protein VITISV_008981 [Vitis vinifera]   474   e-131
ref|XP_002512783.1| Transportin-3, putative [Ricinus communis] g...   444   e-122
ref|XP_003548799.1| PREDICTED: transportin-3-like [Glycine max]       444   e-122
ref|XP_003624561.1| Transportin-3 [Medicago truncatula] gi|35549...   443   e-122

>ref|XP_002276597.2| PREDICTED: transportin-3-like [Vitis vinifera]
            gi|296082227|emb|CBI21232.3| unnamed protein product
            [Vitis vinifera]
          Length = 1015

 Score =  479 bits (1233), Expect = e-133
 Identities = 239/308 (77%), Positives = 264/308 (85%)
 Frame = +2

Query: 2    ACRALSQAIQSSGHYFVTLLPKVLDCLSTKFVSSRNHECYIKTAAVAIEEFGSKEEFGPL 181
            ACRALSQA+QSSG +FVTLLP+VLDCLS  FV  ++HECYI+TA+V +EEFG KEE+GPL
Sbjct: 707  ACRALSQAVQSSGQHFVTLLPEVLDCLSKNFVLFQSHECYIRTASVVLEEFGHKEEYGPL 766

Query: 182  FISTFERFTYAASIMALNSSYVCDQEPDLVEAYTNLASILLCSSPKEVLASSGALLEVSF 361
            FIS FERFTYAAS+MALNSSY+CDQEPDLVEAYTN  S  +  SPKEVLA+SG+LLEVSF
Sbjct: 767  FISAFERFTYAASVMALNSSYICDQEPDLVEAYTNFTSTFVRGSPKEVLAASGSLLEVSF 826

Query: 362  QKAAICCTAMHRGAALAAMSYMSCFXXXXXXXXXXXXXCISEGSFEAMAIQVISHSGEGL 541
            QKAAICCTAMHRGAALAAMSYMSCF             CI EGSF A+AIQVISHSGEGL
Sbjct: 827  QKAAICCTAMHRGAALAAMSYMSCFLEVGLISLLESMTCIPEGSFSAVAIQVISHSGEGL 886

Query: 542  VSNVVYALLGVSAMSRVHKSATILQQLAAICSLIERTTCKTILCWESLHGWLRSAVQSLP 721
            VSNVVYALLGVSAMSRVHKSATILQQLAA+CSL E TTCK ILCWESLH WLR AVQ+LP
Sbjct: 887  VSNVVYALLGVSAMSRVHKSATILQQLAAVCSLSEGTTCKAILCWESLHEWLRLAVQALP 946

Query: 722  AEYLRQGEAESLVPLWLKALSAAASDYLESRNCSGRKNDCAHMQGKGGRVLKRLVREFAD 901
            AEYL+QGEAE LVP+WLKAL  AA DYLES+ C G K++  HMQGKGG++LKRLVREFAD
Sbjct: 947  AEYLKQGEAEVLVPVWLKALGGAALDYLESKRCDGGKDNRGHMQGKGGQILKRLVREFAD 1006

Query: 902  SHRSVSNL 925
            SHR+V NL
Sbjct: 1007 SHRNVPNL 1014


>emb|CAN65470.1| hypothetical protein VITISV_008981 [Vitis vinifera]
          Length = 383

 Score =  474 bits (1220), Expect = e-131
 Identities = 236/304 (77%), Positives = 261/304 (85%)
 Frame = +2

Query: 2   ACRALSQAIQSSGHYFVTLLPKVLDCLSTKFVSSRNHECYIKTAAVAIEEFGSKEEFGPL 181
           ACRALSQA+QSSG +FVTLLP+VLDCLS  FV  ++HECYI+TA+V +EEFG KEE+GPL
Sbjct: 68  ACRALSQAVQSSGQHFVTLLPEVLDCLSKNFVLFQSHECYIRTASVVLEEFGHKEEYGPL 127

Query: 182 FISTFERFTYAASIMALNSSYVCDQEPDLVEAYTNLASILLCSSPKEVLASSGALLEVSF 361
           FIS FERFTYAAS+MALNSSY+CDQEPDLVEAYTN  S  +  SPKEVLA+SG+LLEVSF
Sbjct: 128 FISAFERFTYAASVMALNSSYICDQEPDLVEAYTNFTSTFVRGSPKEVLAASGSLLEVSF 187

Query: 362 QKAAICCTAMHRGAALAAMSYMSCFXXXXXXXXXXXXXCISEGSFEAMAIQVISHSGEGL 541
           QKAAICCTAMHRGAALAAMSYMSCF             CI EGSF A+AIQVISHSGEGL
Sbjct: 188 QKAAICCTAMHRGAALAAMSYMSCFLEVGLISLLESMTCIPEGSFSAVAIQVISHSGEGL 247

Query: 542 VSNVVYALLGVSAMSRVHKSATILQQLAAICSLIERTTCKTILCWESLHGWLRSAVQSLP 721
           VSNVVYALLGVSAMSRVHKSATILQQLAA+CSL E TTCK ILCWESLH WLR AVQ+LP
Sbjct: 248 VSNVVYALLGVSAMSRVHKSATILQQLAAVCSLSEGTTCKAILCWESLHEWLRLAVQALP 307

Query: 722 AEYLRQGEAESLVPLWLKALSAAASDYLESRNCSGRKNDCAHMQGKGGRVLKRLVREFAD 901
           AEYL+QGEAE LVP+WLKAL  AA DYLES+ C G K++  HMQGKGG++LKRLVREFAD
Sbjct: 308 AEYLKQGEAEVLVPVWLKALGGAALDYLESKRCDGGKDNRGHMQGKGGQILKRLVREFAD 367

Query: 902 SHRS 913
           SHR+
Sbjct: 368 SHRN 371


>ref|XP_002512783.1| Transportin-3, putative [Ricinus communis]
            gi|223547794|gb|EEF49286.1| Transportin-3, putative
            [Ricinus communis]
          Length = 1020

 Score =  444 bits (1142), Expect = e-122
 Identities = 224/313 (71%), Positives = 260/313 (83%), Gaps = 4/313 (1%)
 Frame = +2

Query: 2    ACRALSQAIQSSGHYFVTLLPKVLDCLSTKFVSSRNHECYIKTAAVAIEEFGSKEEFGPL 181
            ACRALS AIQSSG +FVTLLP VLDCLST ++S +NH+CYIKTA+V +EEF ++EE+GPL
Sbjct: 708  ACRALSLAIQSSGQHFVTLLPSVLDCLSTNYLSFQNHDCYIKTASVVVEEFSNREEYGPL 767

Query: 182  FISTFERFTYAASIMALNSSYVCDQEPDLVEAYTNLASILLCSSPKEVLASSGALLEVSF 361
            F++TFERFT AASI+ LNSSYVCDQEPDLVEAYTN AS  + S+ KEVLA+S +LLEVSF
Sbjct: 768  FVTTFERFTQAASIIGLNSSYVCDQEPDLVEAYTNFASTFIRSAHKEVLAASASLLEVSF 827

Query: 362  QKAAICCTAMHRGAALAAMSYMSCFXXXXXXXXXXXXXCISEGSFEAMAIQVISHSGEGL 541
            QKAAICCTAMHRGAALAAMSY+SCF              ISEGS+ A+ IQVISHSGEGL
Sbjct: 828  QKAAICCTAMHRGAALAAMSYLSCFLELSLVSLLESMNSISEGSYGAITIQVISHSGEGL 887

Query: 542  VSNVVYALLGVSAMSRVHKSATILQQLAAICSLIERTTCKTILCWESLHGWLRSA----V 709
            VS+VVYALLGVSAMSRVH+ ATILQQLAAICS  ERTT K ILCWESL GWL +A    V
Sbjct: 888  VSSVVYALLGVSAMSRVHRCATILQQLAAICSFSERTTWKAILCWESLRGWLHAANLRQV 947

Query: 710  QSLPAEYLRQGEAESLVPLWLKALSAAASDYLESRNCSGRKNDCAHMQGKGGRVLKRLVR 889
            Q+LP EYL+QGEAE+LVPLW  AL  AASDYL+S++C+G K++  HMQGKGGRVLKRL+ 
Sbjct: 948  QALPVEYLKQGEAETLVPLWFDALVGAASDYLDSKSCNGGKSNYGHMQGKGGRVLKRLIH 1007

Query: 890  EFADSHRSVSNLV 928
            EFADSHR+V + +
Sbjct: 1008 EFADSHRNVPSQI 1020


>ref|XP_003548799.1| PREDICTED: transportin-3-like [Glycine max]
          Length = 1011

 Score =  444 bits (1141), Expect = e-122
 Identities = 220/308 (71%), Positives = 256/308 (83%)
 Frame = +2

Query: 2    ACRALSQAIQSSGHYFVTLLPKVLDCLSTKFVSSRNHECYIKTAAVAIEEFGSKEEFGPL 181
            ACRALS A++SSG +FVTLLPKVLD LST FV  ++HECYI+TA++ IEEFG  EE+G L
Sbjct: 703  ACRALSLAVRSSGQHFVTLLPKVLDWLSTNFVLFQSHECYIRTASIVIEEFGHLEEYGRL 762

Query: 182  FISTFERFTYAASIMALNSSYVCDQEPDLVEAYTNLASILLCSSPKEVLASSGALLEVSF 361
            F+++FERFT+AAS+MAL SSY+CDQEPDLVEAYTN AS  + S  K+ L++ G+LLE+S 
Sbjct: 763  FVTSFERFTHAASVMALTSSYICDQEPDLVEAYTNFASTFIRSCNKDALSACGSLLEISI 822

Query: 362  QKAAICCTAMHRGAALAAMSYMSCFXXXXXXXXXXXXXCISEGSFEAMAIQVISHSGEGL 541
            QKAAICCTAMHRGAALAAMSY+SCF             CI+EGSF   AI VISHSGEGL
Sbjct: 823  QKAAICCTAMHRGAALAAMSYLSCFLDVGLVSLLECMNCITEGSFNITAIHVISHSGEGL 882

Query: 542  VSNVVYALLGVSAMSRVHKSATILQQLAAICSLIERTTCKTILCWESLHGWLRSAVQSLP 721
            VSNVVYALLGVSAMSRVHK ATILQQLAAIC+L ERTT K ILCW++LHGWL +AVQ+LP
Sbjct: 883  VSNVVYALLGVSAMSRVHKCATILQQLAAICTLTERTTWKAILCWQTLHGWLHAAVQALP 942

Query: 722  AEYLRQGEAESLVPLWLKALSAAASDYLESRNCSGRKNDCAHMQGKGGRVLKRLVREFAD 901
            +EYL  GEAE++VPLW KAL+ AASDYLES+N  G K+D  HMQGKGGRVLKRLVREFAD
Sbjct: 943  SEYLNHGEAEAIVPLWSKALADAASDYLESKNSDGLKSDFGHMQGKGGRVLKRLVREFAD 1002

Query: 902  SHRSVSNL 925
            SHR++ NL
Sbjct: 1003 SHRNIPNL 1010


>ref|XP_003624561.1| Transportin-3 [Medicago truncatula] gi|355499576|gb|AES80779.1|
            Transportin-3 [Medicago truncatula]
          Length = 1143

 Score =  443 bits (1140), Expect = e-122
 Identities = 219/308 (71%), Positives = 257/308 (83%)
 Frame = +2

Query: 2    ACRALSQAIQSSGHYFVTLLPKVLDCLSTKFVSSRNHECYIKTAAVAIEEFGSKEEFGPL 181
            ACRALS AIQSSG +F+TLLPKVLD LST FV  ++HECYI+TA++ +EEFG +EE+GPL
Sbjct: 835  ACRALSSAIQSSGQHFMTLLPKVLDWLSTNFVLFQSHECYIRTASIVVEEFGHREEYGPL 894

Query: 182  FISTFERFTYAASIMALNSSYVCDQEPDLVEAYTNLASILLCSSPKEVLASSGALLEVSF 361
            F++ FERFT++ S+MALNSSY+CDQEPDLVEAYTN AS  + S  K+VL+  G+LLEVS 
Sbjct: 895  FVTMFERFTHSTSVMALNSSYICDQEPDLVEAYTNFASTFIRSCNKDVLSVCGSLLEVSI 954

Query: 362  QKAAICCTAMHRGAALAAMSYMSCFXXXXXXXXXXXXXCISEGSFEAMAIQVISHSGEGL 541
            QKAAICCTAMHRGAALAAMSY+SCF             CI+EGS     I VISHSGEGL
Sbjct: 955  QKAAICCTAMHRGAALAAMSYLSCFLDVGLVSLLESMNCIAEGSSNTTTIHVISHSGEGL 1014

Query: 542  VSNVVYALLGVSAMSRVHKSATILQQLAAICSLIERTTCKTILCWESLHGWLRSAVQSLP 721
            VSNVVYALLGVSAMSRVHK AT+LQQLAAIC+L ERT+ K ILCW++L+GWL+SAVQ+LP
Sbjct: 1015 VSNVVYALLGVSAMSRVHKCATVLQQLAAICTLSERTSWKPILCWQTLNGWLQSAVQALP 1074

Query: 722  AEYLRQGEAESLVPLWLKALSAAASDYLESRNCSGRKNDCAHMQGKGGRVLKRLVREFAD 901
            AEYL  GE E+LVPLW KAL+AAASDYLES+N +G K+D  HMQGKGGRVLKRLVREFAD
Sbjct: 1075 AEYLNHGETETLVPLWSKALAAAASDYLESKNSNGLKSDFGHMQGKGGRVLKRLVREFAD 1134

Query: 902  SHRSVSNL 925
            +HR++ NL
Sbjct: 1135 AHRNIPNL 1142


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