BLASTX nr result

ID: Panax21_contig00015203 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015203
         (1170 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17513.3| unnamed protein product [Vitis vinifera]              431   e-118
ref|XP_002266705.1| PREDICTED: nucleolar protein 6-like [Vitis v...   429   e-118
emb|CAN72980.1| hypothetical protein VITISV_009031 [Vitis vinifera]   429   e-118
ref|XP_002529156.1| nucleolar RNA-associated protein, putative [...   377   e-102
ref|XP_004142478.1| PREDICTED: nucleolar protein 6-like [Cucumis...   362   1e-97

>emb|CBI17513.3| unnamed protein product [Vitis vinifera]
          Length = 1066

 Score =  431 bits (1107), Expect = e-118
 Identities = 219/331 (66%), Positives = 256/331 (77%), Gaps = 5/331 (1%)
 Frame = -1

Query: 978 MDAETYTDSMNXXXXXXXXXXXLDYSPSTTKHLDDVVSSIKEAIDKIPEDLQVTADVAPG 799
           MD++T  + M+           LDYS +TTK +DD VS+IK+AID IPEDL+VTAD AP 
Sbjct: 1   MDSDTIMEPMDLKVRELLKEVQLDYSSATTKLVDDTVSAIKQAIDTIPEDLKVTADFAPQ 60

Query: 798 FVRDIGADKVEFKFRKPKSIQIGGSYSFRCIAKPDVNIDIFITLPKECIHEKDYLNYRYH 619
           FVRDIGADKVEF F+KPK  +IGGSYS RC+AKPDV+ID+F+ LPKEC HEKDYLN+RYH
Sbjct: 61  FVRDIGADKVEFNFKKPKLFEIGGSYSIRCVAKPDVDIDLFVRLPKECFHEKDYLNHRYH 120

Query: 618 AKRFLYLSIIKKYLKFSSLAEKIEWSTLQNEARKPILVFYPAVKCPEIQGCSVRLIPTAT 439
           AKRFLYL IIKKYL  SS   K+EWSTLQNEARKP+LV YPA++  E+ G SVR+IPTAT
Sbjct: 121 AKRFLYLCIIKKYLNSSSFIRKVEWSTLQNEARKPVLVVYPAMELAEVPGLSVRIIPTAT 180

Query: 438 SLFSISKLKIQRNNIPALNQ--GVLHATPMYNSSILEDMLLEDNAKFVRSTFLGWTELCE 265
           SLFSI KL ++RNN+ +L Q      ATP YNSSILEDM LEDNA+FV+ TFLGW EL E
Sbjct: 181 SLFSILKLNLKRNNVCSLKQDESTPQATPKYNSSILEDMFLEDNAEFVKRTFLGWKELGE 240

Query: 264 ALILLKVWARQRKSIYAHDCLSGYLISTFMAYLATDSGRNRINKSMNTIQIFCITLDFIA 85
           ALILLKVWARQR SIYA+DCL+G+LIS  M+YLATDSGRN IN SM  +QIF +TLDFIA
Sbjct: 241 ALILLKVWARQRSSIYAYDCLNGFLISVIMSYLATDSGRNLINNSMKPMQIFRVTLDFIA 300

Query: 84  SSNSWKNGIFFKPQGESNFPME---ERKIYL 1
           +S  W  G++FK Q   N   E   ERK YL
Sbjct: 301 TSKLWNTGLYFKSQSLLNISKEELLERKQYL 331


>ref|XP_002266705.1| PREDICTED: nucleolar protein 6-like [Vitis vinifera]
          Length = 1057

 Score =  429 bits (1102), Expect = e-118
 Identities = 216/328 (65%), Positives = 253/328 (77%), Gaps = 2/328 (0%)
 Frame = -1

Query: 978 MDAETYTDSMNXXXXXXXXXXXLDYSPSTTKHLDDVVSSIKEAIDKIPEDLQVTADVAPG 799
           MD++T  + M+           LDYS +TTK +DD VS+IK+AID IPEDL+VTAD AP 
Sbjct: 1   MDSDTIMEPMDLKVRELLKEVQLDYSSATTKLVDDTVSAIKQAIDTIPEDLKVTADFAPQ 60

Query: 798 FVRDIGADKVEFKFRKPKSIQIGGSYSFRCIAKPDVNIDIFITLPKECIHEKDYLNYRYH 619
           FVRDIGADKVEF F+KPK  +IGGSYS RC+AKPDV+ID+F+ LPKEC HEKDYLN+RYH
Sbjct: 61  FVRDIGADKVEFNFKKPKLFEIGGSYSIRCVAKPDVDIDLFVRLPKECFHEKDYLNHRYH 120

Query: 618 AKRFLYLSIIKKYLKFSSLAEKIEWSTLQNEARKPILVFYPAVKCPEIQGCSVRLIPTAT 439
           AKRFLYL IIKKYL  SS   K+EWSTLQNEARKP+LV YPA++  E+ G SVR+IPTAT
Sbjct: 121 AKRFLYLCIIKKYLNSSSFIRKVEWSTLQNEARKPVLVVYPAMELAEVPGLSVRIIPTAT 180

Query: 438 SLFSISKLKIQRNNIPALNQ--GVLHATPMYNSSILEDMLLEDNAKFVRSTFLGWTELCE 265
           SLFSI KL ++RNN+ +L Q      ATP YNSSILEDM LEDNA+FV+ TFLGW EL E
Sbjct: 181 SLFSILKLNLKRNNVCSLKQDESTPQATPKYNSSILEDMFLEDNAEFVKRTFLGWKELGE 240

Query: 264 ALILLKVWARQRKSIYAHDCLSGYLISTFMAYLATDSGRNRINKSMNTIQIFCITLDFIA 85
           ALILLKVWARQR SIYA+DCL+G+LIS  M+YLATDSGRN IN SM  +QIF +TLDFIA
Sbjct: 241 ALILLKVWARQRSSIYAYDCLNGFLISVIMSYLATDSGRNLINNSMKPMQIFRVTLDFIA 300

Query: 84  SSNSWKNGIFFKPQGESNFPMEERKIYL 1
           +S  W  G++FK Q   N   E    YL
Sbjct: 301 TSKLWNTGLYFKSQSLLNISKEVHYQYL 328


>emb|CAN72980.1| hypothetical protein VITISV_009031 [Vitis vinifera]
          Length = 1040

 Score =  429 bits (1102), Expect = e-118
 Identities = 215/309 (69%), Positives = 248/309 (80%), Gaps = 6/309 (1%)
 Frame = -1

Query: 909 DYSPSTTKHLDDVVSSIKEAIDKIPEDLQVTADVAPGFVRDIGADKVEFKFRKPKSIQIG 730
           DYS +TTK +DD VS+IK+AID IPEDL+VTAD AP FVRDIGADKVEF F+KPK  +IG
Sbjct: 47  DYSSATTKLVDDTVSAIKQAIDTIPEDLKVTADFAPQFVRDIGADKVEFNFKKPKLFEIG 106

Query: 729 GSYSFRCIAKPDVNIDIFITLPKECIHEKDYLNYRYHAKRFLYLSIIKKYLKFSSLAEKI 550
           GSYS RC+AKPDV+ID+F+ LPKEC HEKDYLN+RYHAKRFLYL IIKKYL  SS   K+
Sbjct: 107 GSYSIRCVAKPDVDIDLFVRLPKECFHEKDYLNHRYHAKRFLYLCIIKKYLNSSSFIRKV 166

Query: 549 EWSTLQNEARKPILVFYPAVKCPEIQGCSVRLIPTATSLFSISKLKIQRNNIPALNQG-- 376
           EWSTLQNEARKP+LV YPA++  E+ G SVR+IPTATSLFSI KL ++RNN+ +L QG  
Sbjct: 167 EWSTLQNEARKPVLVVYPAMELAEVPGLSVRIIPTATSLFSILKLNLKRNNVXSLKQGYE 226

Query: 375 -VLHATPMYNSSILEDMLLEDNAKFVRSTFLGWTELCEALILLKVWARQRKSIYAHDCLS 199
               ATP YNSSILEDM LEDNA+FV+ TFLGW EL EALILLKVWARQR SIYA+DCL+
Sbjct: 227 STPQATPKYNSSILEDMFLEDNAEFVKRTFLGWKELGEALILLKVWARQRSSIYAYDCLN 286

Query: 198 GYLISTFMAYLATDSGRNRINKSMNTIQIFCITLDFIASSNSWKNGIFFKPQGESNFPME 19
           G+LIS  M+YLATDSGRN IN SM  +QIF +TLDFIA+S  W  G++FK Q   N   E
Sbjct: 287 GFLISVIMSYLATDSGRNLINNSMKPMQIFRVTLDFIATSKLWNTGLYFKSQSLLNISKE 346

Query: 18  ---ERKIYL 1
              ERK YL
Sbjct: 347 ELLERKQYL 355


>ref|XP_002529156.1| nucleolar RNA-associated protein, putative [Ricinus communis]
           gi|223531380|gb|EEF33215.1| nucleolar RNA-associated
           protein, putative [Ricinus communis]
          Length = 1046

 Score =  377 bits (967), Expect = e-102
 Identities = 185/304 (60%), Positives = 233/304 (76%), Gaps = 2/304 (0%)
 Frame = -1

Query: 909 DYSPSTTKHLDDVVSSIKEAIDKIPEDLQVTADVAPGFVRDIGADKVEFKFRKPKSIQIG 730
           DYSP  TK +DD +S+IKE+I+KIP+ L VT D AP FV+DIGADKVEFKF KP + +I 
Sbjct: 21  DYSPCLTKLVDDTISAIKESINKIPQGLAVTGDEAPRFVKDIGADKVEFKFNKPNTFEIR 80

Query: 729 GSYSFRCIAKPDVNIDIFITLPKECIHEKDYLNYRYHAKRFLYLSIIKKYL-KFSSLAEK 553
           GSYS +CIAKP +N+D+F+ LPKEC HEKDYLN+RYHAKRFLYL ++KKYL K SS  +K
Sbjct: 81  GSYSIKCIAKPSINVDLFLHLPKECFHEKDYLNHRYHAKRFLYLCMVKKYLMKSSSSFQK 140

Query: 552 IEWSTLQNEARKPILVFYPAVKCPEIQGCSVRLIPTATSLFSISKLKIQRNNIPALNQG- 376
           +EWS+  +EARKPIL+ YPA K  E  G  +R+IPTA SLF++SKL ++RNNI ALNQG 
Sbjct: 141 VEWSSFNSEARKPILIVYPAKKLVEAPGLFIRIIPTAKSLFNVSKLDLKRNNIRALNQGD 200

Query: 375 VLHATPMYNSSILEDMLLEDNAKFVRSTFLGWTELCEALILLKVWARQRKSIYAHDCLSG 196
           +L  TP YNSSILEDM LED+A F++ TFLGW EL EALILLKVWARQR SIYAHDCL+G
Sbjct: 201 LLLPTPRYNSSILEDMYLEDDADFLKKTFLGWKELREALILLKVWARQRSSIYAHDCLNG 260

Query: 195 YLISTFMAYLATDSGRNRINKSMNTIQIFCITLDFIASSNSWKNGIFFKPQGESNFPMEE 16
           +L++  ++YLA      ++N SM  +QI  + +DFIASS  W  G++F+ + E     EE
Sbjct: 261 FLLAAILSYLAVS---GKVNNSMKPLQIVRVAMDFIASSKLWSQGVYFQQKQEFKVSKEE 317

Query: 15  RKIY 4
           R +Y
Sbjct: 318 RILY 321


>ref|XP_004142478.1| PREDICTED: nucleolar protein 6-like [Cucumis sativus]
          Length = 1070

 Score =  362 bits (929), Expect = 1e-97
 Identities = 192/329 (58%), Positives = 238/329 (72%), Gaps = 3/329 (0%)
 Frame = -1

Query: 981 DMDAETYTDSMNXXXXXXXXXXXLDYSPSTTKHLDDVVSSIKEAIDKIPEDLQVTADVAP 802
           ++D++   D M            LDYSP+  K ++  VS+IK+AI  IP+DL+VTA   P
Sbjct: 12  EIDSDNLLDPMEMKVKELLKEFQLDYSPALHKLVEGTVSAIKKAIKLIPDDLKVTAAATP 71

Query: 801 GFVRDIGADKVEFKFRKPKSIQIGGSYSFRCIAKPDVNIDIFITLPKECIHEKDYLNYRY 622
           GF+RDIGADKVEFKFRKPKSI+IGGSY+F+ IAKPDVN+D+ + LPKEC HEKDYLNYRY
Sbjct: 72  GFIRDIGADKVEFKFRKPKSIKIGGSYAFQGIAKPDVNVDLLVGLPKECFHEKDYLNYRY 131

Query: 621 HAKRFLYLSIIKKYLKFSSLAEKIEWSTLQNEARKPILVFYPAVKCPEI-QGCSVRLIPT 445
           HAKRFLYL  IKKYL  SS+  K+E+STLQNEARKP+L+ +PA++  ++  G  VR+IPT
Sbjct: 132 HAKRFLYLCTIKKYLNSSSMFSKVEYSTLQNEARKPVLIVHPALEELKVAPGFFVRIIPT 191

Query: 444 -ATSLFSISKLKIQRNNIPALNQG-VLHATPMYNSSILEDMLLEDNAKFVRSTFLGWTEL 271
              S FSISKL ++RNNI ALNQG +L ATP YNSSILEDM  ED A+ V+  FL    L
Sbjct: 192 IEASYFSISKLNLKRNNIHALNQGSLLPATPKYNSSILEDMYFEDTAEMVKKPFLESKSL 251

Query: 270 CEALILLKVWARQRKSIYAHDCLSGYLISTFMAYLATDSGRNRINKSMNTIQIFCITLDF 91
            E LILLKVWARQR  IY HDCLSG+LI+  ++YL T    N IN SM  IQ+F + + F
Sbjct: 252 VETLILLKVWARQRAPIYVHDCLSGFLIAVILSYLIT---HNIINHSMTAIQMFRVAVKF 308

Query: 90  IASSNSWKNGIFFKPQGESNFPMEERKIY 4
           IASS+ WK G++FK   +S    EE+K Y
Sbjct: 309 IASSDLWKRGLYFKLGPQSTVSKEEKKQY 337


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