BLASTX nr result

ID: Panax21_contig00015184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015184
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275378.2| PREDICTED: uncharacterized protein LOC100248...   123   1e-26
emb|CBI40398.3| unnamed protein product [Vitis vinifera]              123   1e-26
ref|XP_002511914.1| hypothetical protein RCOM_1616500 [Ricinus c...   103   2e-20
ref|XP_002301371.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
ref|XP_002320153.1| predicted protein [Populus trichocarpa] gi|2...    92   4e-17

>ref|XP_002275378.2| PREDICTED: uncharacterized protein LOC100248277 [Vitis vinifera]
          Length = 785

 Score =  123 bits (309), Expect = 1e-26
 Identities = 67/128 (52%), Positives = 87/128 (67%)
 Frame = -2

Query: 386 GISEQLYNNNNKVEAVPSVLTCEDLEQKILSEYSESSSTFLPPVQDSSVSGAEMVVPKAS 207
           GI EQLYN+N K  A+P VLTCEDLE  ILSE S++S+T  PPVQ  S S  +   PK +
Sbjct: 517 GIPEQLYNSN-KPFAIPGVLTCEDLEHSILSEISDNSATLQPPVQSQSSSDVKTQQPKIN 575

Query: 206 VDNHASLHLLSLLQKGTDLKDMTRPPNVEIGSSDNLLAPEVDNIGTALDKSGQAETENLQ 27
           +DNHAS HLLSLLQKGTD+KD     N+++GSSD L   E +NIG+    S +   E + 
Sbjct: 576 IDNHASQHLLSLLQKGTDMKDRAPSSNLDMGSSDKLNVFEKENIGSI---STEENAEKIH 632

Query: 26  NTGKNITL 3
           ++G ++TL
Sbjct: 633 SSGTSLTL 640


>emb|CBI40398.3| unnamed protein product [Vitis vinifera]
          Length = 935

 Score =  123 bits (309), Expect = 1e-26
 Identities = 67/128 (52%), Positives = 87/128 (67%)
 Frame = -2

Query: 386 GISEQLYNNNNKVEAVPSVLTCEDLEQKILSEYSESSSTFLPPVQDSSVSGAEMVVPKAS 207
           GI EQLYN+N K  A+P VLTCEDLE  ILSE S++S+T  PPVQ  S S  +   PK +
Sbjct: 561 GIPEQLYNSN-KPFAIPGVLTCEDLEHSILSEISDNSATLQPPVQSQSSSDVKTQQPKIN 619

Query: 206 VDNHASLHLLSLLQKGTDLKDMTRPPNVEIGSSDNLLAPEVDNIGTALDKSGQAETENLQ 27
           +DNHAS HLLSLLQKGTD+KD     N+++GSSD L   E +NIG+    S +   E + 
Sbjct: 620 IDNHASQHLLSLLQKGTDMKDRAPSSNLDMGSSDKLNVFEKENIGSI---STEENAEKIH 676

Query: 26  NTGKNITL 3
           ++G ++TL
Sbjct: 677 SSGTSLTL 684


>ref|XP_002511914.1| hypothetical protein RCOM_1616500 [Ricinus communis]
           gi|223549094|gb|EEF50583.1| hypothetical protein
           RCOM_1616500 [Ricinus communis]
          Length = 1088

 Score =  103 bits (256), Expect = 2e-20
 Identities = 63/121 (52%), Positives = 75/121 (61%), Gaps = 1/121 (0%)
 Frame = -2

Query: 362 NNNKVEAVPSVLTCEDLEQKILSEYSESSSTFLPPVQD-SSVSGAEMVVPKASVDNHASL 186
           N +K+EA P+VLTCEDLEQ ILSE +ES     PPVQ  S  SGA+M   K  +DNHAS 
Sbjct: 587 NIDKLEAAPAVLTCEDLEQSILSEITESGPMSQPPVQGWSGDSGAKMEQQKVDIDNHASQ 646

Query: 185 HLLSLLQKGTDLKDMTRPPNVEIGSSDNLLAPEVDNIGTALDKSGQAETENLQNTGKNIT 6
            LLSLLQKGTDL          I S+D L + EV+N   AL  SG+   EN+ N G  +T
Sbjct: 647 QLLSLLQKGTDL---------GIISADKLQSVEVENHDVALHSSGEIAAENITNAGGPLT 697

Query: 5   L 3
           L
Sbjct: 698 L 698


>ref|XP_002301371.1| predicted protein [Populus trichocarpa] gi|222843097|gb|EEE80644.1|
           predicted protein [Populus trichocarpa]
          Length = 1077

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 57/124 (45%), Positives = 74/124 (59%), Gaps = 3/124 (2%)
 Frame = -2

Query: 365 NNNNKVEAVPSVLTCEDLEQKILSEYSESSSTFLPPVQDSSVSGAEMVVPKASVDNHASL 186
           +N +K + VP+VLTCEDLEQ ILSE +E+ ST LPPV     SG  + + +   + HAS 
Sbjct: 564 SNTDKPDVVPAVLTCEDLEQSILSEITENGSTLLPPVH--GWSGGHVKIEQQKAEYHASQ 621

Query: 185 HLLSLLQKGTDLKDMTRPPNV---EIGSSDNLLAPEVDNIGTALDKSGQAETENLQNTGK 15
           HLLSLLQKGT L +     N+   +I  +D L   EV N   A  K   A+ EN+ N GK
Sbjct: 622 HLLSLLQKGTGLDNAAPSANLGISQISVADRLQNTEVANPSNAPRKPRDADAENIPNPGK 681

Query: 14  NITL 3
            +TL
Sbjct: 682 ALTL 685


>ref|XP_002320153.1| predicted protein [Populus trichocarpa] gi|222860926|gb|EEE98468.1|
           predicted protein [Populus trichocarpa]
          Length = 1068

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 52/117 (44%), Positives = 69/117 (58%)
 Frame = -2

Query: 353 KVEAVPSVLTCEDLEQKILSEYSESSSTFLPPVQDSSVSGAEMVVPKASVDNHASLHLLS 174
           K++A P+VLTCEDLEQ ILSE +E+ S   PPV      G ++   +   D HAS HLLS
Sbjct: 562 KLDAAPAVLTCEDLEQSILSEITENGSALPPPVY--GWGGGDVKAEQQKADVHASQHLLS 619

Query: 173 LLQKGTDLKDMTRPPNVEIGSSDNLLAPEVDNIGTALDKSGQAETENLQNTGKNITL 3
           LLQKGT L ++    N+ I ++D      V N   A  K   A+ EN+ N+GK +TL
Sbjct: 620 LLQKGTGLNNLAPSANLGISATDRQQNSGVANPSKAAHKPRHADAENIPNSGKALTL 676


Top