BLASTX nr result

ID: Panax21_contig00015173 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015173
         (1512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AER13163.1| cyclin-like F-box [Phaseolus vulgaris]                 377   e-102
ref|XP_002320094.1| f-box family protein [Populus trichocarpa] g...   376   e-101
ref|XP_003552361.1| PREDICTED: F-box protein At4g00755-like [Gly...   375   e-101
ref|XP_003534593.1| PREDICTED: F-box protein At4g00755 [Glycine ...   374   e-101
ref|XP_002511796.1| conserved hypothetical protein [Ricinus comm...   369   1e-99

>gb|AER13163.1| cyclin-like F-box [Phaseolus vulgaris]
          Length = 363

 Score =  377 bits (969), Expect = e-102
 Identities = 196/314 (62%), Positives = 227/314 (72%), Gaps = 1/314 (0%)
 Frame = +3

Query: 93   MADHFDFLQLLGTDMALKILTCLDDSADLVRASCVSRFWRDSLIANGLCKQLCLRIFPQL 272
            M  H DF+  L TD  LKIL CLDD AD VR +CVSR WR S+IANGLCKQLCLR+FPQL
Sbjct: 1    MEYHKDFITYLDTDTCLKILMCLDDPADFVRVTCVSRSWRHSVIANGLCKQLCLRMFPQL 60

Query: 273  ANIAFVAELSGKN-KKSVDVGSSNSMQWEALDREHMVYASLFKALTAIKVINCLAHAVSA 449
            +  AFV EL+    K+  +VGSS SM+W  L REH V++ L KAL +   +NC+A  V A
Sbjct: 61   SRFAFVVELNQHGTKEHEEVGSSYSMEWLVLQREHRVFSYLGKALMSSVAMNCIAKTVGA 120

Query: 450  SSTDNYPEESIRNTLDPRDQILRRGSYWSSKGQSNPEVPETLIYKLRADFCVITEINIQP 629
            SSTDN+P+ESI NTL+PRD I  R SYWSS GQSNP VPETL Y+L +  CVITEINIQP
Sbjct: 121  SSTDNFPQESIDNTLEPRDVISGRYSYWSSDGQSNPNVPETLTYELVSQICVITEINIQP 180

Query: 630  FQAYFQPGHPIYSSKSVRFRIGQPKFPADIDKDLRQLPLQQHADEKFIWTYTSQDFPMSQ 809
            FQA+FQ G PIYS+ SVRF++G PK   D              +E F+WTYTS +FPMSQ
Sbjct: 181  FQAHFQLGSPIYSANSVRFKMGHPKDSLD-----------AFDEELFVWTYTSPEFPMSQ 229

Query: 810  ENHLQNFKLPEPILCIGGFLQIELLGRVQTQATDDLFYICVSHVQVLGWPLTPAFDVDIL 989
            EN LQ FKLPEP+LCIGG LQIELLGRVQ Q  D L Y+CVSHVQVLG  L+P F+VDIL
Sbjct: 230  ENRLQKFKLPEPVLCIGGILQIELLGRVQRQEMDGLLYMCVSHVQVLGGSLSPPFNVDIL 289

Query: 990  GPSGKFSLKYDREA 1031
             PSG F LK D+ A
Sbjct: 290  QPSGMFVLKRDQLA 303


>ref|XP_002320094.1| f-box family protein [Populus trichocarpa]
            gi|222860867|gb|EEE98409.1| f-box family protein [Populus
            trichocarpa]
          Length = 374

 Score =  376 bits (965), Expect = e-101
 Identities = 197/326 (60%), Positives = 231/326 (70%), Gaps = 4/326 (1%)
 Frame = +3

Query: 90   QMADHFDFLQLLGTDMALKILTCLDDSADLVRASCVSRFWRDSLIANGLCKQLCLRIFPQ 269
            +M    DFL  L  D ++KIL CL+D +DLVRAS VSR WRD +IANGLCKQLCL +FP 
Sbjct: 4    RMEIRMDFLNCLDHDTSIKILRCLEDPSDLVRASYVSRSWRDFVIANGLCKQLCLSMFPH 63

Query: 270  LANIAFVAELSGKNKKSVDVGSSNSMQWEALDREHMVYASLFKALTAIKVINCLAHAVSA 449
            L  +  V E S   +K+ +VG S  ++WE L REH  YA L +A  +    +C+  A+SA
Sbjct: 64   LLRVDCVIEPSCVMEKASEVGCSKFVEWETLKREHKAYAFLAQACLSFPFDDCIKDAISA 123

Query: 450  SSTDNYPEESIRNTLDPRDQILRRGSYWSSKGQSNPEVPETLIYKLRADFCVITEINIQP 629
            SSTDNYPEESIRNTL   D++ RR SYWSSKGQ    VPETL+YKL AD CVITEINIQP
Sbjct: 124  SSTDNYPEESIRNTLQKGDRVGRRPSYWSSKGQRKAAVPETLVYKLVADICVITEINIQP 183

Query: 630  FQAYFQPGHPIYSSKSVRFRIGQPKFPADIDKDLRQLPLQQHADEKFIWTYTSQDFPMSQ 809
            FQAYFQ G PIYS++SVRF +G PK P D   D    PL   AD+KFIWTY+S +FPM+Q
Sbjct: 184  FQAYFQQGSPIYSAESVRFHLGHPKCPMD---DTLGEPLDNCADDKFIWTYSSPEFPMAQ 240

Query: 810  ENHLQNFKLPEPILCIGGFLQIELLGRVQTQATDDLFYICVSHVQVLGWPLTPAFDVDIL 989
            E  LQNFKLPEP++CIGG LQIELL RVQ Q  D LFYICV+HVQV G PL+ AF V+IL
Sbjct: 241  ERSLQNFKLPEPVVCIGGILQIELLRRVQRQEMDGLFYICVAHVQVKGRPLSSAFGVEIL 300

Query: 990  GPSGKFSLK----YDREALPHTLQND 1055
            GPSGKF LK      R +LP  L  D
Sbjct: 301  GPSGKFVLKTLSSAPRSSLPPGLPED 326


>ref|XP_003552361.1| PREDICTED: F-box protein At4g00755-like [Glycine max]
          Length = 364

 Score =  375 bits (963), Expect = e-101
 Identities = 199/330 (60%), Positives = 234/330 (70%), Gaps = 1/330 (0%)
 Frame = +3

Query: 108  DFLQLLGTDMALKILTCLDDSADLVRASCVSRFWRDSLIANGLCKQLCLRIFPQLANIAF 287
            D L  L +D ++KIL  LDD ADLVRA+CVSR WRD +IANGLCKQLCLR+FPQL+ +AF
Sbjct: 7    DVLSYLDSDTSIKILMSLDDLADLVRATCVSRSWRDIVIANGLCKQLCLRMFPQLSRVAF 66

Query: 288  VAELSGKN-KKSVDVGSSNSMQWEALDREHMVYASLFKALTAIKVINCLAHAVSASSTDN 464
            V EL+    K+  +VGSS SM+W +L REH V+A L +AL +   +NC+A  V ASSTDN
Sbjct: 67   VVELNQNGAKEHAEVGSSYSMEWLSLLREHRVFAYLGRALMSSVAMNCIAKTVGASSTDN 126

Query: 465  YPEESIRNTLDPRDQILRRGSYWSSKGQSNPEVPETLIYKLRADFCVITEINIQPFQAYF 644
            +P+ESI NTL+PRD I  R  YWSS GQSNP VPETL Y+L +  CVITEINIQPFQA F
Sbjct: 127  FPQESIDNTLEPRDHINGRYYYWSSNGQSNPNVPETLTYELVSPICVITEINIQPFQADF 186

Query: 645  QPGHPIYSSKSVRFRIGQPKFPADIDKDLRQLPLQQHADEKFIWTYTSQDFPMSQENHLQ 824
            Q G PIYS+KSVRF++G PK   D              DE F+WTYTS +FPMS+EN LQ
Sbjct: 187  QIGSPIYSAKSVRFKMGHPKASLDATD-----------DEMFVWTYTSPEFPMSKENRLQ 235

Query: 825  NFKLPEPILCIGGFLQIELLGRVQTQATDDLFYICVSHVQVLGWPLTPAFDVDILGPSGK 1004
             FKLPEP+LCIGGFLQIELLGR+Q Q  D L YICVSHVQVLG  L+P F+VDIL PSG 
Sbjct: 236  KFKLPEPVLCIGGFLQIELLGRIQRQEMDGLLYICVSHVQVLGGSLSPPFNVDILQPSGM 295

Query: 1005 FSLKYDREALPHTLQNDSLPTPSSGASPPE 1094
            F LK D+ A       D  P  +SG    E
Sbjct: 296  FVLKRDQLA-------DHQPVVTSGNESQE 318


>ref|XP_003534593.1| PREDICTED: F-box protein At4g00755 [Glycine max]
          Length = 363

 Score =  374 bits (959), Expect = e-101
 Identities = 194/309 (62%), Positives = 225/309 (72%), Gaps = 1/309 (0%)
 Frame = +3

Query: 108  DFLQLLGTDMALKILTCLDDSADLVRASCVSRFWRDSLIANGLCKQLCLRIFPQLANIAF 287
            D L  L +D +LKI  CLDD ADLVR +CVSR WR  +IANGLCKQLCLR+FPQL+ +AF
Sbjct: 7    DVLSCLDSDTSLKIFMCLDDLADLVRVTCVSRSWRHFVIANGLCKQLCLRMFPQLSRVAF 66

Query: 288  VAELSGKN-KKSVDVGSSNSMQWEALDREHMVYASLFKALTAIKVINCLAHAVSASSTDN 464
            V EL+    K+  +VGSS SM+W +L REH VYA L +AL +   +NC+A  V ASSTDN
Sbjct: 67   VVELNQNGAKEHAEVGSSYSMEWLSLLREHRVYAYLGRALMSSVAMNCIAKTVGASSTDN 126

Query: 465  YPEESIRNTLDPRDQILRRGSYWSSKGQSNPEVPETLIYKLRADFCVITEINIQPFQAYF 644
            +P+ESI NTL+PRD I  R  YWSS GQSNP VPETL Y+L +  CVITEINIQPFQA F
Sbjct: 127  FPQESIDNTLEPRDYINGRYCYWSSDGQSNPNVPETLTYELVSQICVITEINIQPFQADF 186

Query: 645  QPGHPIYSSKSVRFRIGQPKFPADIDKDLRQLPLQQHADEKFIWTYTSQDFPMSQENHLQ 824
            Q G PIYS+KSVRF++G PK   D+             DE F+WTY S +FPMSQEN LQ
Sbjct: 187  QRGSPIYSAKSVRFKMGHPKASLDVAD-----------DEMFVWTYNSPEFPMSQENRLQ 235

Query: 825  NFKLPEPILCIGGFLQIELLGRVQTQATDDLFYICVSHVQVLGWPLTPAFDVDILGPSGK 1004
             FKLPEP+LCIGG LQIELLGRVQ Q  D L YICVSHVQVLG  L+P F+VDIL PSG 
Sbjct: 236  KFKLPEPVLCIGGILQIELLGRVQRQEMDGLLYICVSHVQVLGSSLSPPFNVDILQPSGM 295

Query: 1005 FSLKYDREA 1031
            F LK D+ A
Sbjct: 296  FVLKRDQLA 304


>ref|XP_002511796.1| conserved hypothetical protein [Ricinus communis]
            gi|223548976|gb|EEF50465.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 362

 Score =  369 bits (947), Expect = 1e-99
 Identities = 190/327 (58%), Positives = 229/327 (70%)
 Frame = +3

Query: 93   MADHFDFLQLLGTDMALKILTCLDDSADLVRASCVSRFWRDSLIANGLCKQLCLRIFPQL 272
            M    DF   L  D  ++IL CL+D +DLVR S VSR WR  +IANGLCKQLCLR+FP L
Sbjct: 1    METGMDFFSWLDYDTVMRILMCLEDPSDLVRVSSVSRSWRHFVIANGLCKQLCLRMFPCL 60

Query: 273  ANIAFVAELSGKNKKSVDVGSSNSMQWEALDREHMVYASLFKALTAIKVINCLAHAVSAS 452
             ++  V E     K  + +G S SM+WE L+REH V+A L +  T+  +  C++ A+SAS
Sbjct: 61   HSVDHVTEPDSM-KNPLGIGCSKSMEWETLEREHRVFAFLARGCTSFALKECISEAISAS 119

Query: 453  STDNYPEESIRNTLDPRDQILRRGSYWSSKGQSNPEVPETLIYKLRADFCVITEINIQPF 632
            STDNYP ESI NTL+PRD+I RR SYWSSKGQSNP VPETLIYKL AD C+ITEI++ PF
Sbjct: 120  STDNYPGESIHNTLEPRDRIARRASYWSSKGQSNPAVPETLIYKLVADICLITEISVHPF 179

Query: 633  QAYFQPGHPIYSSKSVRFRIGQPKFPADIDKDLRQLPLQQHADEKFIWTYTSQDFPMSQE 812
            QA+FQPG PIYS+ SVRFR+G  K P D   D    P    AD+  +WTYTS +F M+QE
Sbjct: 180  QAFFQPGTPIYSANSVRFRMGHLKAPED---DPMSEPCDNCADD-VVWTYTSPEFAMAQE 235

Query: 813  NHLQNFKLPEPILCIGGFLQIELLGRVQTQATDDLFYICVSHVQVLGWPLTPAFDVDILG 992
            N LQ F+LPEP+LCIGG LQ+ELLGRVQ Q  D LFYICVSHVQVLG PL+PAF  +IL 
Sbjct: 236  NRLQKFELPEPVLCIGGILQVELLGRVQKQEMDGLFYICVSHVQVLGRPLSPAFTFEILE 295

Query: 993  PSGKFSLKYDREALPHTLQNDSLPTPS 1073
             SGKF LK    A P + +    P P+
Sbjct: 296  RSGKFVLKTQSYARPSSPEKTFCPLPN 322


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