BLASTX nr result

ID: Panax21_contig00015170 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015170
         (558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272794.1| PREDICTED: uncharacterized protein LOC100244...    89   5e-16
emb|CBI39789.3| unnamed protein product [Vitis vinifera]               85   7e-15
ref|NP_001236397.1| uncharacterized protein LOC100306022 [Glycin...    69   6e-10
ref|XP_003551407.1| PREDICTED: uncharacterized protein LOC100817...    68   8e-10
ref|XP_002330604.1| predicted protein [Populus trichocarpa] gi|2...    63   4e-08

>ref|XP_002272794.1| PREDICTED: uncharacterized protein LOC100244627 isoform 1 [Vitis
           vinifera] gi|225462007|ref|XP_002272826.1| PREDICTED:
           uncharacterized protein LOC100244627 isoform 2 [Vitis
           vinifera]
          Length = 170

 Score = 89.0 bits (219), Expect = 5e-16
 Identities = 54/116 (46%), Positives = 72/116 (62%), Gaps = 12/116 (10%)
 Frame = -3

Query: 385 MSSLATNPIASPGTAPVVST------------VSQFRRQIKHIGYGSLNFSPLRMQSHLF 242
           MSSL  + IA P   P+               V  +R+ +   G  +++   L  QS  F
Sbjct: 1   MSSLTASAIAIPAKRPLEGECRGQIKILGPVPVGLYRQSLSFGGTQAISPVVLYRQSLSF 60

Query: 241 NKRRTISLSSKRNSASVICAAALNARCGAEQTQTVTRQSSTITIAPIQGKEKSPDL 74
            + + I+  +++ SAS+ICA+ALNARCGAEQTQTVTR+SSTITIAP QGKEKSP+L
Sbjct: 61  GRTQAIA-HTRKQSASLICASALNARCGAEQTQTVTRESSTITIAPTQGKEKSPEL 115


>emb|CBI39789.3| unnamed protein product [Vitis vinifera]
          Length = 233

 Score = 85.1 bits (209), Expect = 7e-15
 Identities = 46/84 (54%), Positives = 62/84 (73%)
 Frame = -3

Query: 325 VSQFRRQIKHIGYGSLNFSPLRMQSHLFNKRRTISLSSKRNSASVICAAALNARCGAEQT 146
           V  +R+ +   G  +++   L  QS  F + + I+  +++ SAS+ICA+ALNARCGAEQT
Sbjct: 80  VGLYRQSLSFGGTQAISPVVLYRQSLSFGRTQAIA-HTRKQSASLICASALNARCGAEQT 138

Query: 145 QTVTRQSSTITIAPIQGKEKSPDL 74
           QTVTR+SSTITIAP QGKEKSP+L
Sbjct: 139 QTVTRESSTITIAPTQGKEKSPEL 162


>ref|NP_001236397.1| uncharacterized protein LOC100306022 [Glycine max]
           gi|255627307|gb|ACU13998.1| unknown [Glycine max]
          Length = 159

 Score = 68.6 bits (166), Expect = 6e-10
 Identities = 51/113 (45%), Positives = 63/113 (55%), Gaps = 12/113 (10%)
 Frame = -3

Query: 376 LATNPIASPGTAP------------VVSTVSQFRRQIKHIGYGSLNFSPLRMQSHLFNKR 233
           LAT+ +AS    P            VVST+S  RR +      + N  PL      F +R
Sbjct: 2   LATSAVASLPVLPPVRRGGHHIEQNVVSTLSFPRRLLT-----TNNSIPLSGTQFPFGRR 56

Query: 232 RTISLSSKRNSASVICAAALNARCGAEQTQTVTRQSSTITIAPIQGKEKSPDL 74
                +   ++A++ICAAALNARCGAEQTQTVTRQ+ TIT  P  GKEKSP L
Sbjct: 57  -----AHSTHTATIICAAALNARCGAEQTQTVTRQAPTITHVP--GKEKSPQL 102


>ref|XP_003551407.1| PREDICTED: uncharacterized protein LOC100817121 [Glycine max]
          Length = 159

 Score = 68.2 bits (165), Expect = 8e-10
 Identities = 52/111 (46%), Positives = 65/111 (58%), Gaps = 10/111 (9%)
 Frame = -3

Query: 376 LATNPIASPGTAPVVSTVSQFRRQIKHIGYGSLNFSPLRMQSHLFNKRRTISLSSKR--- 206
           LA + IAS    PV+  V +    I+     +L+F P R+Q+       +ISLSS +   
Sbjct: 2   LAISAIAS---LPVLPPVRRGGHCIEQNVVSTLSF-PRRLQT----TNNSISLSSTQFPF 53

Query: 205 -------NSASVICAAALNARCGAEQTQTVTRQSSTITIAPIQGKEKSPDL 74
                    A++ICAAALNARCGAEQTQTVTRQ+ TIT  P  GKEKSP L
Sbjct: 54  GRRARSTQPATIICAAALNARCGAEQTQTVTRQAPTITHVP--GKEKSPQL 102


>ref|XP_002330604.1| predicted protein [Populus trichocarpa] gi|222872162|gb|EEF09293.1|
           predicted protein [Populus trichocarpa]
          Length = 159

 Score = 62.8 bits (151), Expect = 4e-08
 Identities = 39/104 (37%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
 Frame = -3

Query: 382 SSLATNPIASPGTAPVVSTVSQFRRQIKHIGYGSLNFSPLRMQSHLFNKRRTISLSSKRN 203
           S++++ P++ P       T  Q + QIK  G G L    L  Q    ++ +    SS++ 
Sbjct: 7   SNISSVPVSVPA-----KTRGQCKGQIKQTGQGPLG---LATQLQPIDRIKPFVHSSRKR 58

Query: 202 SASVICAAALNARCGAE-QTQTVTRQSSTITIAPIQGKEKSPDL 74
           SAS+IC+AA+NARC    QTQTV +++ TIT AP++   K+P L
Sbjct: 59  SASIICSAAMNARCSTSGQTQTVLKETPTITKAPVREPTKTPQL 102


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