BLASTX nr result

ID: Panax21_contig00015167 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015167
         (572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003613272.1| AP-1 complex subunit gamma-1 [Medicago trunc...   186   2e-45
ref|XP_002890600.1| GAMMA-ADAPTIN 1 [Arabidopsis lyrata subsp. l...   182   3e-44
ref|XP_003517778.1| PREDICTED: AP-1 complex subunit gamma-2-like...   181   1e-43
ref|XP_002521026.1| AP-1 complex subunit gamma-2, putative [Rici...   181   1e-43
ref|XP_002265190.1| PREDICTED: AP-1 complex subunit gamma-2 [Vit...   179   4e-43

>ref|XP_003613272.1| AP-1 complex subunit gamma-1 [Medicago truncatula]
            gi|355514607|gb|AES96230.1| AP-1 complex subunit gamma-1
            [Medicago truncatula]
          Length = 872

 Score =  186 bits (472), Expect = 2e-45
 Identities = 93/122 (76%), Positives = 103/122 (84%)
 Frame = -1

Query: 572  PAYPSIVVAFESSHLRMMFNFSKQPGNLQATFIEANFLNKSSDVYTDFIFQAAVPKFLQL 393
            P YPS V AFESS LR+ FNFSKQPGN Q T I+A F N SS+ YTDF+FQAAVPKFLQL
Sbjct: 752  PVYPS-VTAFESSSLRLTFNFSKQPGNPQTTVIQATFTNLSSNTYTDFVFQAAVPKFLQL 810

Query: 392  HLDLASSNSLPASGEGSITQKLRVTNSQHGKKSLVMRFRIAYKLNDKDVMEEGQISNFPR 213
            HLD AS N+LPA+G GS+TQ LRVTNSQHGKKSLVMR RIAYK+N KD +EEGQISNFP+
Sbjct: 811  HLDPASGNTLPAAGNGSVTQTLRVTNSQHGKKSLVMRIRIAYKVNGKDTLEEGQISNFPK 870

Query: 212  GL 207
            GL
Sbjct: 871  GL 872


>ref|XP_002890600.1| GAMMA-ADAPTIN 1 [Arabidopsis lyrata subsp. lyrata]
            gi|297336442|gb|EFH66859.1| GAMMA-ADAPTIN 1 [Arabidopsis
            lyrata subsp. lyrata]
          Length = 876

 Score =  182 bits (463), Expect = 3e-44
 Identities = 92/122 (75%), Positives = 104/122 (85%)
 Frame = -1

Query: 572  PAYPSIVVAFESSHLRMMFNFSKQPGNLQATFIEANFLNKSSDVYTDFIFQAAVPKFLQL 393
            PAYP IV A+ESS L++ F FSK PGNLQ+T ++A F N S + +TDFIFQAAVPKFLQL
Sbjct: 756  PAYPPIV-AYESSSLKIEFTFSKAPGNLQSTNVQATFTNLSPNTFTDFIFQAAVPKFLQL 814

Query: 392  HLDLASSNSLPASGEGSITQKLRVTNSQHGKKSLVMRFRIAYKLNDKDVMEEGQISNFPR 213
            HLD ASSN+LPASG G+ITQ LRVTNSQHGKKSLVMR RI YKLN KDV+EEGQ+SNFPR
Sbjct: 815  HLDPASSNTLPASGNGAITQNLRVTNSQHGKKSLVMRMRIGYKLNGKDVLEEGQVSNFPR 874

Query: 212  GL 207
            GL
Sbjct: 875  GL 876


>ref|XP_003517778.1| PREDICTED: AP-1 complex subunit gamma-2-like isoform 1 [Glycine max]
          Length = 872

 Score =  181 bits (458), Expect = 1e-43
 Identities = 91/122 (74%), Positives = 104/122 (85%)
 Frame = -1

Query: 572  PAYPSIVVAFESSHLRMMFNFSKQPGNLQATFIEANFLNKSSDVYTDFIFQAAVPKFLQL 393
            P YPS V AFESS LR+ FNFSKQPGN Q T I+A F+N SS+ YTDF+FQAAVPKFLQL
Sbjct: 754  PVYPS-VTAFESSSLRLTFNFSKQPGNPQTTVIQATFMNLSSNTYTDFVFQAAVPKFLQL 812

Query: 392  HLDLASSNSLPASGEGSITQKLRVTNSQHGKKSLVMRFRIAYKLNDKDVMEEGQISNFPR 213
            HLD ASSN+LPA+  GSITQ L++TNSQHGKKSLVMR RIAYK+N KD +EEGQ++NFPR
Sbjct: 813  HLDPASSNTLPAN--GSITQSLKITNSQHGKKSLVMRIRIAYKINGKDTLEEGQVNNFPR 870

Query: 212  GL 207
            GL
Sbjct: 871  GL 872


>ref|XP_002521026.1| AP-1 complex subunit gamma-2, putative [Ricinus communis]
            gi|223539863|gb|EEF41443.1| AP-1 complex subunit gamma-2,
            putative [Ricinus communis]
          Length = 875

 Score =  181 bits (458), Expect = 1e-43
 Identities = 91/120 (75%), Positives = 102/120 (85%)
 Frame = -1

Query: 566  YPSIVVAFESSHLRMMFNFSKQPGNLQATFIEANFLNKSSDVYTDFIFQAAVPKFLQLHL 387
            YPSIV AFESS+LRM FNFSK PGN Q T I+A F N S + +TDF+FQAAVPKFLQLHL
Sbjct: 757  YPSIV-AFESSNLRMTFNFSKSPGNPQTTIIQATFANLSPNAFTDFVFQAAVPKFLQLHL 815

Query: 386  DLASSNSLPASGEGSITQKLRVTNSQHGKKSLVMRFRIAYKLNDKDVMEEGQISNFPRGL 207
            D ASSN+LPASG GS+TQ LRVTNSQHGKK LVMR RIAYK+N KD++EEGQI+NFPR L
Sbjct: 816  DPASSNTLPASGNGSLTQNLRVTNSQHGKKPLVMRIRIAYKMNGKDMLEEGQINNFPRDL 875


>ref|XP_002265190.1| PREDICTED: AP-1 complex subunit gamma-2 [Vitis vinifera]
            gi|296086533|emb|CBI32122.3| unnamed protein product
            [Vitis vinifera]
          Length = 878

 Score =  179 bits (453), Expect = 4e-43
 Identities = 90/122 (73%), Positives = 102/122 (83%)
 Frame = -1

Query: 572  PAYPSIVVAFESSHLRMMFNFSKQPGNLQATFIEANFLNKSSDVYTDFIFQAAVPKFLQL 393
            P YPSIV AFESS LR+ FNFSK P N Q T ++A+F N S +++TDFIFQAAVPKFLQL
Sbjct: 758  PVYPSIV-AFESSALRLTFNFSKTPANPQTTLVQASFTNLSPNIFTDFIFQAAVPKFLQL 816

Query: 392  HLDLASSNSLPASGEGSITQKLRVTNSQHGKKSLVMRFRIAYKLNDKDVMEEGQISNFPR 213
            HLD AS N+LPASG GSITQ LRVTNS HGKK LVMR RIAYK+N+KDV+EEGQI+NFPR
Sbjct: 817  HLDSASGNTLPASGNGSITQNLRVTNSLHGKKPLVMRIRIAYKMNNKDVLEEGQINNFPR 876

Query: 212  GL 207
             L
Sbjct: 877  DL 878


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