BLASTX nr result

ID: Panax21_contig00015141 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015141
         (663 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281183.1| PREDICTED: uncharacterized protein LOC100254...   270   2e-70
ref|XP_002308277.1| single myb histone [Populus trichocarpa] gi|...   233   2e-59
ref|XP_002330511.1| single myb histone [Populus trichocarpa] gi|...   226   4e-57
ref|XP_002514135.1| DNA binding protein, putative [Ricinus commu...   221   7e-56
ref|XP_004146812.1| PREDICTED: telomere repeat-binding factor 5-...   190   2e-46

>ref|XP_002281183.1| PREDICTED: uncharacterized protein LOC100254369 [Vitis vinifera]
           gi|297738637|emb|CBI27882.3| unnamed protein product
           [Vitis vinifera]
          Length = 281

 Score =  270 bits (689), Expect = 2e-70
 Identities = 135/185 (72%), Positives = 152/185 (82%), Gaps = 1/185 (0%)
 Frame = -3

Query: 556 NPKQKWTSEEEEALRAGVAKHGTGKWKNIQKDPEFNHFLYSRSNIDLKDKWRNMSVSANG 377
           NPKQKWTSEEEEALRAGVAKHGTGKWKNIQKDPEFNHFL++RSNIDLKDKWRNMSVSA+G
Sbjct: 3   NPKQKWTSEEEEALRAGVAKHGTGKWKNIQKDPEFNHFLFTRSNIDLKDKWRNMSVSASG 62

Query: 376 QGPREKSRTPKAKLNSDAPATPLLIG-QTPASSTPTANDALTDAAIDDSSKCLLDGKTAS 200
           QGPREKSRTPK K N+DAP+   +   Q  +S+ P   DA  D A+DD+SK +LDGK+A 
Sbjct: 63  QGPREKSRTPKTKANTDAPSAATVSNPQNSSSAAPVTGDASAD-AMDDASKNILDGKSAP 121

Query: 199 KYDAMIYEALSTLKDPNGSDTSAIVGFSEQRHEVPQNFXXXXXXXXXXLVAQDKLEKVQN 20
           +Y+AMI+EALS LK+PNGSDTS IV F EQRHEVPQNF          LVAQDKLEKVQN
Sbjct: 122 RYNAMIFEALSALKEPNGSDTSTIVSFIEQRHEVPQNFRRLLSSRLRRLVAQDKLEKVQN 181

Query: 19  CYRIK 5
           CY+IK
Sbjct: 182 CYKIK 186


>ref|XP_002308277.1| single myb histone [Populus trichocarpa]
           gi|222854253|gb|EEE91800.1| single myb histone [Populus
           trichocarpa]
          Length = 275

 Score =  233 bits (595), Expect = 2e-59
 Identities = 122/186 (65%), Positives = 139/186 (74%), Gaps = 2/186 (1%)
 Frame = -3

Query: 556 NPKQKWTSEEEEALRAGVAKHGTGKWKNIQKDPEFNHFLYSRSNIDLKDKWRNMSVSANG 377
           NPKQKWTSEEEEALRAGVAKHGTGKWKNIQ+DPEFN +LYSRSNIDLKDKWRNM+VSA  
Sbjct: 3   NPKQKWTSEEEEALRAGVAKHGTGKWKNIQRDPEFNPYLYSRSNIDLKDKWRNMTVSAGS 62

Query: 376 QGPREKSRTPKAKLNSD--APATPLLIGQTPASSTPTANDALTDAAIDDSSKCLLDGKTA 203
           Q  ++KSRT K K   D  A ATPL   QT A+S   A  A  D AIDD S+   D KTA
Sbjct: 63  QSVKDKSRTTKVKSIPDAAAAATPLPNPQTSAASAAAA--AAADVAIDDYSEAAADSKTA 120

Query: 202 SKYDAMIYEALSTLKDPNGSDTSAIVGFSEQRHEVPQNFXXXXXXXXXXLVAQDKLEKVQ 23
            KY+AMI+EA+S   +PNG+DTSAI+ + EQR E+PQNF          LVAQ+KLEKVQ
Sbjct: 121 PKYNAMIFEAISAFNEPNGADTSAIISYIEQRQELPQNFRRQLSSRLRRLVAQEKLEKVQ 180

Query: 22  NCYRIK 5
           NCY+IK
Sbjct: 181 NCYKIK 186


>ref|XP_002330511.1| single myb histone [Populus trichocarpa]
           gi|222872445|gb|EEF09576.1| single myb histone [Populus
           trichocarpa]
          Length = 279

 Score =  226 bits (575), Expect = 4e-57
 Identities = 115/184 (62%), Positives = 138/184 (75%)
 Frame = -3

Query: 556 NPKQKWTSEEEEALRAGVAKHGTGKWKNIQKDPEFNHFLYSRSNIDLKDKWRNMSVSANG 377
           NPKQKW SEEEEALRAG+AKHGTGKWKNIQ+DPEFN +L SRSNIDLKDKWRNM+VSA  
Sbjct: 3   NPKQKWKSEEEEALRAGIAKHGTGKWKNIQRDPEFNPYLRSRSNIDLKDKWRNMTVSAGS 62

Query: 376 QGPREKSRTPKAKLNSDAPATPLLIGQTPASSTPTANDALTDAAIDDSSKCLLDGKTASK 197
           Q  ++KSRT KAK + DA A  ++   TP S+  T+  A  D  IDDSS+   D KTA K
Sbjct: 63  QSVKDKSRTLKAKSSPDAAA--VVAASTPLSNPHTSAVAAVDVVIDDSSEAAADSKTAPK 120

Query: 196 YDAMIYEALSTLKDPNGSDTSAIVGFSEQRHEVPQNFXXXXXXXXXXLVAQDKLEKVQNC 17
           Y+AMI+EA+S L +PNG+DTSAI+ + E+R E+PQNF          LVAQ+KLEKVQN 
Sbjct: 121 YNAMIFEAISALNEPNGADTSAIISYIERRQELPQNFRRQLSSRLRRLVAQEKLEKVQNF 180

Query: 16  YRIK 5
           Y+IK
Sbjct: 181 YKIK 184


>ref|XP_002514135.1| DNA binding protein, putative [Ricinus communis]
           gi|223546591|gb|EEF48089.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 283

 Score =  221 bits (564), Expect = 7e-56
 Identities = 116/191 (60%), Positives = 135/191 (70%), Gaps = 7/191 (3%)
 Frame = -3

Query: 556 NPKQKWTSEEEEALRAGVAKHGTGKWKNIQKDPEFNHFLYSRSNIDLKDKWRNMSVSANG 377
           NPKQKWT+EEEEALRAGVAKHGTGKWKNIQKDPEFN FL+SRSNIDLKDKWRNMSVSA  
Sbjct: 3   NPKQKWTAEEEEALRAGVAKHGTGKWKNIQKDPEFNPFLFSRSNIDLKDKWRNMSVSAG- 61

Query: 376 QGPREKSRTPKAKLNSDAPATPLLIGQTPASSTPTANDALT-------DAAIDDSSKCLL 218
               EKSRTPK K NSD P     +   P S+  ++   +T       D  +DDS+K   
Sbjct: 62  ----EKSRTPKPKANSDIPPATKAVSPIPVSNLQSSASVITTSPLDEADPMVDDSTKTFG 117

Query: 217 DGKTASKYDAMIYEALSTLKDPNGSDTSAIVGFSEQRHEVPQNFXXXXXXXXXXLVAQDK 38
           D KTA KY+AMI+EA+S L   +G+DT+AIV + EQR  VPQNF          LVAQ+K
Sbjct: 118 DAKTAPKYNAMIFEAISALNKQHGADTTAIVSYIEQRQVVPQNFRRQLSSRLRRLVAQEK 177

Query: 37  LEKVQNCYRIK 5
           LEKVQNC++IK
Sbjct: 178 LEKVQNCFKIK 188


>ref|XP_004146812.1| PREDICTED: telomere repeat-binding factor 5-like [Cucumis sativus]
           gi|449476637|ref|XP_004154792.1| PREDICTED: telomere
           repeat-binding factor 5-like [Cucumis sativus]
          Length = 279

 Score =  190 bits (482), Expect = 2e-46
 Identities = 108/186 (58%), Positives = 123/186 (66%), Gaps = 2/186 (1%)
 Frame = -3

Query: 556 NPKQKWTSEEEEALRAGVAKHGTGKWKNIQKDPEFNHFLYSRSNIDLKDKWRNMSVSANG 377
           N KQKWTSEEE+AL AGV KHG GKWKNI KDP+F   L  RSNIDLKDKWRN+SVS   
Sbjct: 3   NQKQKWTSEEEDALLAGVNKHGPGKWKNILKDPDFAPSLTHRSNIDLKDKWRNLSVSTAS 62

Query: 376 QGPREKSR-TPKAKLNSDAPATPLLIGQTPASSTPTANDALTDAAIDDS-SKCLLDGKTA 203
           QG +EKSR  PKAK    A    +   QT A + P A+    DAA DD+ +    DGK  
Sbjct: 63  QGSKEKSRAAPKAK----AIVAAISNNQTSAPAKPNAS---ADAAGDDTPNNSTQDGKNV 115

Query: 202 SKYDAMIYEALSTLKDPNGSDTSAIVGFSEQRHEVPQNFXXXXXXXXXXLVAQDKLEKVQ 23
            +Y +MI+EALST+KD NG D   IV F EQRHEVPQNF          LV+Q KLEKVQ
Sbjct: 116 PRYYSMIFEALSTIKDSNGCDIGTIVNFIEQRHEVPQNFRRQLSSKLRRLVSQGKLEKVQ 175

Query: 22  NCYRIK 5
           NCYR+K
Sbjct: 176 NCYRVK 181


Top