BLASTX nr result
ID: Panax21_contig00015124
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00015124
(1044 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280748.1| PREDICTED: DNA repair protein RAD51 homolog ... 375 e-101
ref|XP_003605159.1| DNA repair protein RAD51-like protein [Medic... 357 2e-96
ref|XP_003609084.1| DNA repair protein RAD51-like protein [Medic... 357 3e-96
ref|XP_004133923.1| PREDICTED: DNA repair protein RAD51 homolog ... 352 7e-95
ref|NP_001189749.1| DNA repair protein RAD51-like 3 [Arabidopsis... 351 1e-94
>ref|XP_002280748.1| PREDICTED: DNA repair protein RAD51 homolog 3 [Vitis vinifera]
gi|296089196|emb|CBI38899.3| unnamed protein product
[Vitis vinifera]
Length = 346
Score = 375 bits (963), Expect = e-101
Identities = 185/231 (80%), Positives = 208/231 (90%)
Frame = -3
Query: 1039 QTAWDMLHEEEFLACITTSCSDLDSILGGGINCKEVTEIGGVPGIGKTQLGIQLAVNVQI 860
QTAWDMLHEEE L CITTSC DLD ILGGGI CKEVTEIGGVPGIGKTQLGIQLAVNVQI
Sbjct: 73 QTAWDMLHEEESLKCITTSCVDLDDILGGGIKCKEVTEIGGVPGIGKTQLGIQLAVNVQI 132
Query: 859 PVDYGGLGGKAIYIDTEGSFMVERALQIAEACLEDMSEYNGFLRKDFHASKLKKQPKDLL 680
PV+YGGLGGKAIYIDTEGSFM+ER+LQIAEAC+EDMS + FL+KDF + ++K QPKD L
Sbjct: 133 PVNYGGLGGKAIYIDTEGSFMLERSLQIAEACIEDMSGNSDFLQKDFQSCQVKAQPKDFL 192
Query: 679 ENIFYFRVCSYTEQIAMINYLEKFISEHKDVKVVIVDSITFHFRQDFDDMALRTRLLSGM 500
+NIFYFRVCSYTEQIAMINYL+KFISEHKDV VVI+DS+TFHFRQDFDD+ALRTRLLSGM
Sbjct: 193 QNIFYFRVCSYTEQIAMINYLDKFISEHKDVNVVIIDSVTFHFRQDFDDLALRTRLLSGM 252
Query: 499 ALKLMKLAKSFSLAVVLFNQVTTKYSDGSFHLTLALGNFHSQ*AFHSLVVF 347
ALKLMKLAK FSLAVVL NQVTTK+++GSF LTLALG+ S + ++++
Sbjct: 253 ALKLMKLAKKFSLAVVLLNQVTTKHTEGSFQLTLALGDSWSHSCTNRVILY 303
Score = 100 bits (250), Expect = 5e-19
Identities = 44/52 (84%), Positives = 48/52 (92%)
Frame = -1
Query: 210 GDSWSHACTNRIILYWNGNERYAYIDKSPSLQSASAPYSVTGKGIRNLVSDC 55
GDSWSH+CTNR+ILYWNG+ERYAYIDKSPSL+SASAPYSVTGKGIR S C
Sbjct: 289 GDSWSHSCTNRVILYWNGDERYAYIDKSPSLRSASAPYSVTGKGIRTATSKC 340
>ref|XP_003605159.1| DNA repair protein RAD51-like protein [Medicago truncatula]
gi|355506214|gb|AES87356.1| DNA repair protein RAD51-like
protein [Medicago truncatula]
Length = 347
Score = 357 bits (917), Expect = 2e-96
Identities = 173/232 (74%), Positives = 203/232 (87%)
Frame = -3
Query: 1042 GQTAWDMLHEEEFLACITTSCSDLDSILGGGINCKEVTEIGGVPGIGKTQLGIQLAVNVQ 863
GQTAWDML+EE F + ITTSC DLD+ILGGGINCKEVTEIGGVPGIGKTQ+GIQLAVNVQ
Sbjct: 73 GQTAWDMLNEERFSSLITTSCLDLDNILGGGINCKEVTEIGGVPGIGKTQIGIQLAVNVQ 132
Query: 862 IPVDYGGLGGKAIYIDTEGSFMVERALQIAEACLEDMSEYNGFLRKDFHASKLKKQPKDL 683
IP+DYGGLGGKAIYIDTEGSFMVER LQIAEAC+ED+SEY+ KD A +K P +
Sbjct: 133 IPLDYGGLGGKAIYIDTEGSFMVERVLQIAEACIEDLSEYSHHFYKDNQAFGVKMHPNSI 192
Query: 682 LENIFYFRVCSYTEQIAMINYLEKFISEHKDVKVVIVDSITFHFRQDFDDMALRTRLLSG 503
LENIFYFRVCSYTEQIA++NYL+KF++EHKDVK++I+DS+TFHFRQDFDDMALRTRLL
Sbjct: 193 LENIFYFRVCSYTEQIALVNYLDKFVTEHKDVKIIIIDSVTFHFRQDFDDMALRTRLLGE 252
Query: 502 MALKLMKLAKSFSLAVVLFNQVTTKYSDGSFHLTLALGNFHSQ*AFHSLVVF 347
M+LKLMKLAK+FSLAVV+ NQVTTK+ +GSF LTLALG+ S + ++++
Sbjct: 253 MSLKLMKLAKNFSLAVVMLNQVTTKHIEGSFQLTLALGDSWSHSCTNRIILY 304
Score = 92.0 bits (227), Expect = 2e-16
Identities = 41/50 (82%), Positives = 46/50 (92%)
Frame = -1
Query: 210 GDSWSHACTNRIILYWNGNERYAYIDKSPSLQSASAPYSVTGKGIRNLVS 61
GDSWSH+CTNRIILYWN +ER+AYIDKSPSL+SASAPYSVT +GIRN S
Sbjct: 290 GDSWSHSCTNRIILYWNDDERHAYIDKSPSLKSASAPYSVTSRGIRNSTS 339
>ref|XP_003609084.1| DNA repair protein RAD51-like protein [Medicago truncatula]
gi|357477663|ref|XP_003609117.1| DNA repair protein
RAD51-like protein [Medicago truncatula]
gi|355510139|gb|AES91281.1| DNA repair protein RAD51-like
protein [Medicago truncatula] gi|355510172|gb|AES91314.1|
DNA repair protein RAD51-like protein [Medicago
truncatula]
Length = 347
Score = 357 bits (916), Expect = 3e-96
Identities = 173/232 (74%), Positives = 202/232 (87%)
Frame = -3
Query: 1042 GQTAWDMLHEEEFLACITTSCSDLDSILGGGINCKEVTEIGGVPGIGKTQLGIQLAVNVQ 863
GQTAWDML+EE F + ITTSC DLD+ILGGGINCKEVTEIGGVPGIGKTQ+GIQLAVNVQ
Sbjct: 73 GQTAWDMLNEERFSSLITTSCLDLDNILGGGINCKEVTEIGGVPGIGKTQIGIQLAVNVQ 132
Query: 862 IPVDYGGLGGKAIYIDTEGSFMVERALQIAEACLEDMSEYNGFLRKDFHASKLKKQPKDL 683
IP+DYGGLGGKAIYIDTEGSFMVER LQIAEAC+EDMSEY+ KD A +K P +
Sbjct: 133 IPLDYGGLGGKAIYIDTEGSFMVERVLQIAEACIEDMSEYSHHFHKDNQAFGVKMHPNSI 192
Query: 682 LENIFYFRVCSYTEQIAMINYLEKFISEHKDVKVVIVDSITFHFRQDFDDMALRTRLLSG 503
LENIFYFRVCSYTEQIA++NYL+KF++EHKDVK++I+DS+TFHFRQDFDDMALRTRLL
Sbjct: 193 LENIFYFRVCSYTEQIALVNYLDKFVTEHKDVKIIIIDSVTFHFRQDFDDMALRTRLLGE 252
Query: 502 MALKLMKLAKSFSLAVVLFNQVTTKYSDGSFHLTLALGNFHSQ*AFHSLVVF 347
M+LKLMKLAK+ SLAVV+ NQVTTK+ +GSF LTLALG+ S + ++++
Sbjct: 253 MSLKLMKLAKNLSLAVVMLNQVTTKHIEGSFQLTLALGDSWSHSCTNRIILY 304
Score = 94.7 bits (234), Expect = 3e-17
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = -1
Query: 210 GDSWSHACTNRIILYWNGNERYAYIDKSPSLQSASAPYSVTGKGIRNLVS 61
GDSWSH+CTNRIILYWNG+ER+AYIDKSPSL+SASAPYSVT +GIRN S
Sbjct: 290 GDSWSHSCTNRIILYWNGDERHAYIDKSPSLKSASAPYSVTSRGIRNSTS 339
>ref|XP_004133923.1| PREDICTED: DNA repair protein RAD51 homolog 3-like [Cucumis sativus]
gi|449480051|ref|XP_004155785.1| PREDICTED: DNA repair
protein RAD51 homolog 3-like [Cucumis sativus]
Length = 346
Score = 352 bits (904), Expect = 7e-95
Identities = 172/231 (74%), Positives = 207/231 (89%)
Frame = -3
Query: 1039 QTAWDMLHEEEFLACITTSCSDLDSILGGGINCKEVTEIGGVPGIGKTQLGIQLAVNVQI 860
+TAWDMLH+E+F+ ITTSC+DLD++LGGGIN EVTEIGGVPGIGKTQLGIQLAVNVQI
Sbjct: 73 ETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKTQLGIQLAVNVQI 132
Query: 859 PVDYGGLGGKAIYIDTEGSFMVERALQIAEACLEDMSEYNGFLRKDFHASKLKKQPKDLL 680
P +GG+GGKA+YIDTEGSFMVERALQIAEAC+EDMS+Y+ L+K+ +++ +PKD+L
Sbjct: 133 PGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQIQIEPKDIL 192
Query: 679 ENIFYFRVCSYTEQIAMINYLEKFISEHKDVKVVIVDSITFHFRQDFDDMALRTRLLSGM 500
ENIFYFRVCSYTEQIA+INYL+KFI+EHKDVKVVIVDS+TFHFRQ+FDD+ALRTRLLS M
Sbjct: 193 ENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFDDLALRTRLLSEM 252
Query: 499 ALKLMKLAKSFSLAVVLFNQVTTKYSDGSFHLTLALGNFHSQ*AFHSLVVF 347
ALK MKLAK FSLAVVLFNQVTTK+++GSF LTLALG+ S + ++++
Sbjct: 253 ALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRIILY 303
Score = 95.1 bits (235), Expect = 2e-17
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = -1
Query: 210 GDSWSHACTNRIILYWNGNERYAYIDKSPSLQSASAPYSVTGKGIRNLVS 61
GDSWSH+CTNRIILYWNG+ERYAY++KSPSLQSASAPYSVT +GIRN S
Sbjct: 289 GDSWSHSCTNRIILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNCTS 338
>ref|NP_001189749.1| DNA repair protein RAD51-like 3 [Arabidopsis thaliana]
gi|330255440|gb|AEC10534.1| DNA repair protein RAD51-like
3 [Arabidopsis thaliana]
Length = 387
Score = 351 bits (901), Expect = 1e-94
Identities = 172/231 (74%), Positives = 205/231 (88%)
Frame = -3
Query: 1039 QTAWDMLHEEEFLACITTSCSDLDSILGGGINCKEVTEIGGVPGIGKTQLGIQLAVNVQI 860
+ AWDMLHEEE L ITTSCSDLD+ILGGGI+C++VTEIGGVPGIGKTQ+GIQL+VNVQI
Sbjct: 114 KNAWDMLHEEESLPRITTSCSDLDNILGGGISCRDVTEIGGVPGIGKTQIGIQLSVNVQI 173
Query: 859 PVDYGGLGGKAIYIDTEGSFMVERALQIAEACLEDMSEYNGFLRKDFHASKLKKQPKDLL 680
P + GGLGGKAIYIDTEGSFMVERALQIAEAC+EDM EY G++ K F A++++ +P+D+L
Sbjct: 174 PRECGGLGGKAIYIDTEGSFMVERALQIAEACVEDMEEYTGYMHKHFQANQVQMKPEDIL 233
Query: 679 ENIFYFRVCSYTEQIAMINYLEKFISEHKDVKVVIVDSITFHFRQDFDDMALRTRLLSGM 500
ENIFYFRVCSYTEQIA++N+LEKFISE+KDVKVVIVDSITFHFRQD+DD+A RTR+LS M
Sbjct: 234 ENIFYFRVCSYTEQIALVNHLEKFISENKDVKVVIVDSITFHFRQDYDDLAQRTRVLSEM 293
Query: 499 ALKLMKLAKSFSLAVVLFNQVTTKYSDGSFHLTLALGNFHSQ*AFHSLVVF 347
ALK MKLAK FSLAVVL NQVTTK+S+GSF L LALG+ S + ++++
Sbjct: 294 ALKFMKLAKKFSLAVVLLNQVTTKFSEGSFQLALALGDSWSHSCTNRVILY 344
Score = 89.7 bits (221), Expect = 1e-15
Identities = 38/47 (80%), Positives = 44/47 (93%)
Frame = -1
Query: 210 GDSWSHACTNRIILYWNGNERYAYIDKSPSLQSASAPYSVTGKGIRN 70
GDSWSH+CTNR+ILYWNG+ERYAYIDKSPSL SASA Y+VT +G+RN
Sbjct: 330 GDSWSHSCTNRVILYWNGDERYAYIDKSPSLPSASASYTVTSRGLRN 376