BLASTX nr result

ID: Panax21_contig00015111 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015111
         (1080 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK39958.1| unknown [Medicago truncatula]                           84   5e-14
ref|XP_003598632.1| F-box protein SKIP5 [Medicago truncatula] gi...    84   5e-14
ref|XP_003598631.1| F-box protein SKIP5 [Medicago truncatula] gi...    84   5e-14
gb|AFK33567.1| unknown [Lotus japonicus]                               84   8e-14
ref|XP_002269519.1| PREDICTED: F-box protein SKIP5 [Vitis vinife...    84   8e-14

>gb|AFK39958.1| unknown [Medicago truncatula]
          Length = 141

 Score = 84.3 bits (207), Expect = 5e-14
 Identities = 41/45 (91%), Positives = 43/45 (95%)
 Frame = +3

Query: 792 GDGVSVSQTRIEGGAKAVLTSGSLALQRVRVIYARTSILFWFDVE 926
           GDGV VSQTRIEGGAKAVLTSG LALQRVRV+YARTS+LFWFDVE
Sbjct: 95  GDGVFVSQTRIEGGAKAVLTSGDLALQRVRVVYARTSLLFWFDVE 139


>ref|XP_003598632.1| F-box protein SKIP5 [Medicago truncatula]
           gi|355487680|gb|AES68883.1| F-box protein SKIP5
           [Medicago truncatula]
          Length = 141

 Score = 84.3 bits (207), Expect = 5e-14
 Identities = 41/45 (91%), Positives = 43/45 (95%)
 Frame = +3

Query: 792 GDGVSVSQTRIEGGAKAVLTSGSLALQRVRVIYARTSILFWFDVE 926
           GDGV VSQTRIEGGAKAVLTSG LALQRVRV+YARTS+LFWFDVE
Sbjct: 95  GDGVFVSQTRIEGGAKAVLTSGDLALQRVRVVYARTSLLFWFDVE 139


>ref|XP_003598631.1| F-box protein SKIP5 [Medicago truncatula]
           gi|355487679|gb|AES68882.1| F-box protein SKIP5
           [Medicago truncatula]
          Length = 260

 Score = 84.3 bits (207), Expect = 5e-14
 Identities = 41/45 (91%), Positives = 43/45 (95%)
 Frame = +3

Query: 792 GDGVSVSQTRIEGGAKAVLTSGSLALQRVRVIYARTSILFWFDVE 926
           GDGV VSQTRIEGGAKAVLTSG LALQRVRV+YARTS+LFWFDVE
Sbjct: 214 GDGVFVSQTRIEGGAKAVLTSGDLALQRVRVVYARTSLLFWFDVE 258


>gb|AFK33567.1| unknown [Lotus japonicus]
          Length = 268

 Score = 83.6 bits (205), Expect = 8e-14
 Identities = 41/45 (91%), Positives = 43/45 (95%)
 Frame = +3

Query: 792 GDGVSVSQTRIEGGAKAVLTSGSLALQRVRVIYARTSILFWFDVE 926
           GDGV VSQTRIEGGAKAV+TSG LALQRVRVIYARTS+LFWFDVE
Sbjct: 222 GDGVFVSQTRIEGGAKAVVTSGDLALQRVRVIYARTSLLFWFDVE 266


>ref|XP_002269519.1| PREDICTED: F-box protein SKIP5 [Vitis vinifera]
           gi|297742690|emb|CBI35143.3| unnamed protein product
           [Vitis vinifera]
          Length = 254

 Score = 83.6 bits (205), Expect = 8e-14
 Identities = 42/53 (79%), Positives = 47/53 (88%)
 Frame = +3

Query: 774 SLLKCCGDGVSVSQTRIEGGAKAVLTSGSLALQRVRVIYARTSILFWFDVEHQ 932
           S +K  GD VSVS+TRIEGGAKAV+TSGSLALQRVRVIYARTSI FWFDV+ +
Sbjct: 202 SSVKSHGDSVSVSRTRIEGGAKAVVTSGSLALQRVRVIYARTSIFFWFDVDRR 254


Top