BLASTX nr result
ID: Panax21_contig00015078
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00015078
(709 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_850847.1| chromatin remodeling factor17 [Arabidopsis thal... 91 4e-36
ref|XP_002873907.1| hypothetical protein ARALYDRAFT_488746 [Arab... 91 8e-36
ref|NP_568365.2| chromatin remodeling factor17 [Arabidopsis thal... 91 9e-35
gb|AAK59663.1| putative chromatin remodelling complex ATPase cha... 91 9e-35
ref|XP_003546091.1| PREDICTED: putative chromatin-remodeling com... 91 2e-16
>ref|NP_850847.1| chromatin remodeling factor17 [Arabidopsis thaliana]
gi|332005205|gb|AED92588.1| chromatin remodeling factor17
[Arabidopsis thaliana]
Length = 1072
Score = 90.5 bits (223), Expect(3) = 4e-36
Identities = 44/55 (80%), Positives = 47/55 (85%), Gaps = 1/55 (1%)
Frame = +2
Query: 389 ICMVHKLRYGNWDELKAAFLTSPLFCCDWFVKSSTTQELA-RCDTLIHLVEKKTK 550
ICMVHKL YGNWDELKAAF TSPLF DWFVKS TTQELA RCDTLI L+EK+ +
Sbjct: 961 ICMVHKLGYGNWDELKAAFRTSPLFRFDWFVKSRTTQELARRCDTLIRLIEKENQ 1015
Score = 65.1 bits (157), Expect(3) = 4e-36
Identities = 29/34 (85%), Positives = 30/34 (88%)
Frame = +1
Query: 199 KAFGKKLDCYKNYWLELKILYGQNKGKLYNEECD 300
KA GKKLD Y+N WLELKI YGQNKGKLYNEECD
Sbjct: 924 KAIGKKLDRYRNPWLELKIQYGQNKGKLYNEECD 957
Score = 42.7 bits (99), Expect(3) = 4e-36
Identities = 27/57 (47%), Positives = 30/57 (52%)
Frame = +1
Query: 538 EENQEFDKMERQXXXXXXXXXXXXXXXXXXXRQAAESTPPPTMKKRKQLLMDYYVSS 708
+ENQEFD+ ERQ RQA ES P +KKRKQL MD YVSS
Sbjct: 1012 KENQEFDERERQARKEKKLSKSATPSKRPSGRQANES-PSSLLKKRKQLSMDDYVSS 1067
>ref|XP_002873907.1| hypothetical protein ARALYDRAFT_488746 [Arabidopsis lyrata subsp.
lyrata] gi|297319744|gb|EFH50166.1| hypothetical protein
ARALYDRAFT_488746 [Arabidopsis lyrata subsp. lyrata]
Length = 1074
Score = 90.5 bits (223), Expect(3) = 8e-36
Identities = 44/55 (80%), Positives = 47/55 (85%), Gaps = 1/55 (1%)
Frame = +2
Query: 389 ICMVHKLRYGNWDELKAAFLTSPLFCCDWFVKSSTTQELA-RCDTLIHLVEKKTK 550
ICMVHKL YGNWDELKAAF TSPLF DWFVKS TTQELA RCDTLI L+EK+ +
Sbjct: 963 ICMVHKLGYGNWDELKAAFRTSPLFRFDWFVKSRTTQELARRCDTLIRLIEKENQ 1017
Score = 65.1 bits (157), Expect(3) = 8e-36
Identities = 29/34 (85%), Positives = 30/34 (88%)
Frame = +1
Query: 199 KAFGKKLDCYKNYWLELKILYGQNKGKLYNEECD 300
KA GKKLD Y+N WLELKI YGQNKGKLYNEECD
Sbjct: 926 KAIGKKLDRYRNPWLELKIQYGQNKGKLYNEECD 959
Score = 41.6 bits (96), Expect(3) = 8e-36
Identities = 26/57 (45%), Positives = 30/57 (52%)
Frame = +1
Query: 538 EENQEFDKMERQXXXXXXXXXXXXXXXXXXXRQAAESTPPPTMKKRKQLLMDYYVSS 708
+ENQE+D+ ERQ RQA ES P +KKRKQL MD YVSS
Sbjct: 1014 KENQEYDERERQARKEKKLAKNATPSKQPSGRQANES-PSSLLKKRKQLSMDDYVSS 1069
>ref|NP_568365.2| chromatin remodeling factor17 [Arabidopsis thaliana]
gi|332005204|gb|AED92587.1| chromatin remodeling factor17
[Arabidopsis thaliana]
Length = 1069
Score = 90.5 bits (223), Expect(3) = 9e-35
Identities = 44/55 (80%), Positives = 47/55 (85%), Gaps = 1/55 (1%)
Frame = +2
Query: 389 ICMVHKLRYGNWDELKAAFLTSPLFCCDWFVKSSTTQELA-RCDTLIHLVEKKTK 550
ICMVHKL YGNWDELKAAF TSPLF DWFVKS TTQELA RCDTLI L+EK+ +
Sbjct: 961 ICMVHKLGYGNWDELKAAFRTSPLFRFDWFVKSRTTQELARRCDTLIRLIEKENQ 1015
Score = 65.1 bits (157), Expect(3) = 9e-35
Identities = 29/34 (85%), Positives = 30/34 (88%)
Frame = +1
Query: 199 KAFGKKLDCYKNYWLELKILYGQNKGKLYNEECD 300
KA GKKLD Y+N WLELKI YGQNKGKLYNEECD
Sbjct: 924 KAIGKKLDRYRNPWLELKIQYGQNKGKLYNEECD 957
Score = 38.1 bits (87), Expect(3) = 9e-35
Identities = 24/54 (44%), Positives = 27/54 (50%)
Frame = +1
Query: 538 EENQEFDKMERQXXXXXXXXXXXXXXXXXXXRQAAESTPPPTMKKRKQLLMDYY 699
+ENQEFD+ ERQ RQA ES P +KKRKQL MD Y
Sbjct: 1012 KENQEFDERERQARKEKKLSKSATPSKRPSGRQANES-PSSLLKKRKQLSMDDY 1064
>gb|AAK59663.1| putative chromatin remodelling complex ATPase chain ISWI
[Arabidopsis thaliana]
Length = 538
Score = 90.5 bits (223), Expect(3) = 9e-35
Identities = 44/55 (80%), Positives = 47/55 (85%), Gaps = 1/55 (1%)
Frame = +2
Query: 389 ICMVHKLRYGNWDELKAAFLTSPLFCCDWFVKSSTTQELA-RCDTLIHLVEKKTK 550
ICMVHKL YGNWDELKAAF TSPLF DWFVKS TTQELA RCDTLI L+EK+ +
Sbjct: 430 ICMVHKLGYGNWDELKAAFRTSPLFRFDWFVKSRTTQELARRCDTLIRLIEKENQ 484
Score = 65.1 bits (157), Expect(3) = 9e-35
Identities = 29/34 (85%), Positives = 30/34 (88%)
Frame = +1
Query: 199 KAFGKKLDCYKNYWLELKILYGQNKGKLYNEECD 300
KA GKKLD Y+N WLELKI YGQNKGKLYNEECD
Sbjct: 393 KAIGKKLDRYRNPWLELKIQYGQNKGKLYNEECD 426
Score = 38.1 bits (87), Expect(3) = 9e-35
Identities = 24/54 (44%), Positives = 27/54 (50%)
Frame = +1
Query: 538 EENQEFDKMERQXXXXXXXXXXXXXXXXXXXRQAAESTPPPTMKKRKQLLMDYY 699
+ENQEFD+ ERQ RQA ES P +KKRKQL MD Y
Sbjct: 481 KENQEFDERERQARKEKKLSKSATPSKRPSGRQANES-PSSLLKKRKQLSMDDY 533
>ref|XP_003546091.1| PREDICTED: putative chromatin-remodeling complex ATPase chain-like
isoform 2 [Glycine max]
Length = 1064
Score = 90.9 bits (224), Expect = 2e-16
Identities = 45/55 (81%), Positives = 47/55 (85%), Gaps = 1/55 (1%)
Frame = +2
Query: 389 ICMVHKLRYGNWDELKAAFLTSPLFCCDWFVKSSTTQELA-RCDTLIHLVEKKTK 550
ICMVHKL YGNWDELKAAF TSPLF DWFVKS TTQELA RCDTLI LVEK+ +
Sbjct: 955 ICMVHKLGYGNWDELKAAFRTSPLFRFDWFVKSRTTQELARRCDTLIRLVEKENQ 1009
Score = 68.2 bits (165), Expect = 2e-09
Identities = 57/170 (33%), Positives = 69/170 (40%)
Frame = +1
Query: 199 KAFGKKLDCYKNYWLELKILYGQNKGKLYNEECDLLW*DCRRTLISLSHYV*FWTCDIIT 378
KA GKKLD YKN WLELKI YGQNKGKLYNEE C R +I + H + + D
Sbjct: 918 KAIGKKLDRYKNPWLELKIQYGQNKGKLYNEE-------CDRFMICMVHKLGYGNWD--- 967
Query: 379 CCTDMHGSQT*VRELG*VESSISXXXXXXXXXXXXXXXXSGACKM*YTHSFGGEENQEFD 558
EL + + C +ENQE+D
Sbjct: 968 -------------ELKAAFRTSPLFRFDWFVKSRTTQELARRCDT--LIRLVEKENQEYD 1012
Query: 559 KMERQXXXXXXXXXXXXXXXXXXXRQAAESTPPPTMKKRKQLLMDYYVSS 708
+ ERQ RQ P ++KKRKQL MD Y S+
Sbjct: 1013 ERERQARKEKKLAKSMTPSKRALARQTES---PSSLKKRKQLTMDDYAST 1059