BLASTX nr result

ID: Panax21_contig00015074 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015074
         (621 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285189.1| PREDICTED: uncharacterized protein LOC100262...   139   3e-31
ref|XP_002311555.1| predicted protein [Populus trichocarpa] gi|2...   135   6e-30
ref|XP_002521906.1| nucleic acid binding protein, putative [Rici...   131   9e-29
emb|CBI26772.3| unnamed protein product [Vitis vinifera]              125   8e-27
gb|ADL36629.1| C2H2L domain class transcription factor [Malus x ...   124   1e-26

>ref|XP_002285189.1| PREDICTED: uncharacterized protein LOC100262958 [Vitis vinifera]
           gi|147787378|emb|CAN60092.1| hypothetical protein
           VITISV_033421 [Vitis vinifera]
          Length = 425

 Score =  139 bits (351), Expect = 3e-31
 Identities = 82/169 (48%), Positives = 98/169 (57%), Gaps = 25/169 (14%)
 Frame = +1

Query: 49  SNTTYSLHNRNENHATHLRLSIGTSSCSNRNETN--ENDANXXXXXXXXXXXXXXXXXR- 219
           S  TYS  N +ENHATHL+LSIG+ +    NE      DA+                 R 
Sbjct: 257 SPNTYSSRNSDENHATHLKLSIGSCNSGEMNEPRCASGDASRSSPREMNTAEPALAASRL 316

Query: 220 ----------------------QQGKRQIEMAEMELANAKRIRQQAQAELEKAQILKEQA 333
                                 ++ KRQIE+AE+E ANA+RIRQQAQAELEKAQILKEQA
Sbjct: 317 KELASEQLKLAMAEKASAEEARREAKRQIELAELEFANARRIRQQAQAELEKAQILKEQA 376

Query: 334 TKKMSSTMLEITCHACKQHFHAAAPNVAHLEASLAMSYMSSVITQGEGD 480
            KK+SST+L+ITCHACK  F A A      E SLAMSYMSS +T+GEG+
Sbjct: 377 IKKVSSTILQITCHACKHQFQATAAGAPSDETSLAMSYMSSALTEGEGE 425


>ref|XP_002311555.1| predicted protein [Populus trichocarpa] gi|222851375|gb|EEE88922.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score =  135 bits (340), Expect = 6e-30
 Identities = 78/147 (53%), Positives = 97/147 (65%)
 Frame = +1

Query: 40  PSSSNTTYSLHNRNENHATHLRLSIGTSSCSNRNETNENDANXXXXXXXXXXXXXXXXXR 219
           PSSSN  +   N +E HA +L+LSIG++    +  TNE                     R
Sbjct: 257 PSSSN--HLPQNPDEPHAANLKLSIGSTKL--KEFTNEQ------LRLAMTEKAYAEEAR 306

Query: 220 QQGKRQIEMAEMELANAKRIRQQAQAELEKAQILKEQATKKMSSTMLEITCHACKQHFHA 399
           QQ KRQIEMAE+E ANAKRIRQQAQ+ELEKAQ+LKEQATKK+SST++++TC  CKQ FHA
Sbjct: 307 QQAKRQIEMAELEFANAKRIRQQAQSELEKAQLLKEQATKKLSSTIMQVTCQVCKQQFHA 366

Query: 400 AAPNVAHLEASLAMSYMSSVITQGEGD 480
           +       E SLAMSYMSS  T+G+G+
Sbjct: 367 STAAAPADETSLAMSYMSSATTEGDGE 393


>ref|XP_002521906.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223538944|gb|EEF40542.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 477

 Score =  131 bits (330), Expect = 9e-29
 Identities = 86/168 (51%), Positives = 100/168 (59%), Gaps = 29/168 (17%)
 Frame = +1

Query: 40  PSSSNTTYSL---HNRNENHATHLRLSIGTSS---CSNRNETNEN---DANXXXXXXXXX 192
           PSS +T  S    H+    H T+L+LSIG+SS   CS +NE NE    DAN         
Sbjct: 295 PSSVSTRLSSSQNHDDQRYHPTNLKLSIGSSSSNDCSEKNELNEKANLDANREKSVGDPA 354

Query: 193 XXXXXXXX-------------------RQQGKRQIEMAEMELANAKRIRQQAQAELEKAQ 315
                                      RQQ KRQ+EMAE+E ANAKRIRQQAQ+ELEKAQ
Sbjct: 355 LEAAKVKEFANEQLRLAMAEKAYAEDARQQAKRQLEMAELEFANAKRIRQQAQSELEKAQ 414

Query: 316 ILKEQATKKMSSTMLEITCHACKQHFHAAAPNVAHL-EASLAMSYMSS 456
           +L+EQATKK+SSTM++ITC ACKQ F A AP VA   E SLAMSYMSS
Sbjct: 415 VLREQATKKISSTMMQITCQACKQQFQAPAPVVAPADETSLAMSYMSS 462


>emb|CBI26772.3| unnamed protein product [Vitis vinifera]
          Length = 387

 Score =  125 bits (313), Expect = 8e-27
 Identities = 62/88 (70%), Positives = 73/88 (82%)
 Frame = +1

Query: 217 RQQGKRQIEMAEMELANAKRIRQQAQAELEKAQILKEQATKKMSSTMLEITCHACKQHFH 396
           R++ KRQIE+AE+E ANA+RIRQQAQAELEKAQILKEQA KK+SST+L+ITCHACK  F 
Sbjct: 300 RREAKRQIELAELEFANARRIRQQAQAELEKAQILKEQAIKKVSSTILQITCHACKHQFQ 359

Query: 397 AAAPNVAHLEASLAMSYMSSVITQGEGD 480
           A A      E SLAMSYMSS +T+GEG+
Sbjct: 360 ATAAGAPSDETSLAMSYMSSALTEGEGE 387


>gb|ADL36629.1| C2H2L domain class transcription factor [Malus x domestica]
          Length = 488

 Score =  124 bits (311), Expect = 1e-26
 Identities = 86/198 (43%), Positives = 106/198 (53%), Gaps = 51/198 (25%)
 Frame = +1

Query: 40  PSSSNTTYSLHNRNENHATHLRLSIGTSSC------------------------SNRNET 147
           PSS+  T S  N +E+HAT+L+LSIG+ S                         S  NE 
Sbjct: 286 PSSNAHTSSPPNLDESHATNLKLSIGSPSSDQLANEKNESSKYNSSSDIKRRRSSPGNEK 345

Query: 148 NENDANXXXXXXXXXXXXXXXXX------------------RQQGKRQIEMAEMELANAK 273
           N N+A+                                   R++ KRQIEMAE+E ANAK
Sbjct: 346 NVNNASAVGGVGSTSELARWKEFASEELKLAVAEKSYAEDARREAKRQIEMAEIEFANAK 405

Query: 274 RIRQQAQAELEKAQILKEQATKKMSSTMLEITCHACKQHFH--AAAPNVA-------HLE 426
           RIRQQAQAE+EKA +LKEQATK++SS +L++TC ACKQHFH  +AA  VA         E
Sbjct: 406 RIRQQAQAEVEKALLLKEQATKRISSAILQVTCQACKQHFHIASAASTVAGGGAVGRSDE 465

Query: 427 ASLAMSYMSSVITQGEGD 480
            SLAMSYMSS  T+GEGD
Sbjct: 466 TSLAMSYMSSATTEGEGD 483


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