BLASTX nr result

ID: Panax21_contig00015065 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015065
         (1724 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002535144.1| dicer-1, putative [Ricinus communis] gi|2235...    77   2e-11
ref|XP_002301611.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-10
ref|XP_003601360.1| Endoribonuclease Dicer-like protein [Medicag...    72   6e-10
ref|XP_002270948.2| PREDICTED: ribonuclease 3-like protein 3-lik...    72   6e-10
ref|XP_003601369.1| Endoribonuclease Dicer-like protein [Medicag...    71   1e-09

>ref|XP_002535144.1| dicer-1, putative [Ricinus communis] gi|223523936|gb|EEF27239.1|
            dicer-1, putative [Ricinus communis]
          Length = 259

 Score = 76.6 bits (187), Expect = 2e-11
 Identities = 35/50 (70%), Positives = 42/50 (84%)
 Frame = +3

Query: 1224 QVRGFLSALPQYPLHSHGLIDPPKVLADIVESTIGAVFIDSNSSIDITWE 1373
            Q+R F  A+ +YPLHS+GL+D PKVLADIVES IGAVFIDSNSS+D  W+
Sbjct: 132  QIREFSQAILEYPLHSNGLVDVPKVLADIVESAIGAVFIDSNSSVDTVWK 181


>ref|XP_002301611.1| predicted protein [Populus trichocarpa] gi|222843337|gb|EEE80884.1|
            predicted protein [Populus trichocarpa]
          Length = 303

 Score = 73.9 bits (180), Expect = 1e-10
 Identities = 32/52 (61%), Positives = 42/52 (80%)
 Frame = +3

Query: 1224 QVRGFLSALPQYPLHSHGLIDPPKVLADIVESTIGAVFIDSNSSIDITWEVY 1379
            Q+R F  A+  YPLHS+GL++ PK LADIVE+ IGAVFIDSN SID+ W+++
Sbjct: 154  QIREFSQAILDYPLHSNGLVETPKALADIVEAAIGAVFIDSNFSIDVVWKIF 205


>ref|XP_003601360.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
            gi|355490408|gb|AES71611.1| Endoribonuclease Dicer-like
            protein [Medicago truncatula]
          Length = 783

 Score = 71.6 bits (174), Expect = 6e-10
 Identities = 33/63 (52%), Positives = 46/63 (73%)
 Frame = +3

Query: 1224 QVRGFLSALPQYPLHSHGLIDPPKVLADIVESTIGAVFIDSNSSIDITWEVYSIFSILYF 1403
            +++ F+  + +YPLHS+GLID PK+LADIVESTIGA+F+D  SSI+  W+    F  L  
Sbjct: 545  EIQAFIKEVVEYPLHSNGLIDVPKILADIVESTIGAIFVDCGSSIETVWK---FFKKLLV 601

Query: 1404 PVL 1412
            PV+
Sbjct: 602  PVI 604


>ref|XP_002270948.2| PREDICTED: ribonuclease 3-like protein 3-like [Vitis vinifera]
            gi|297739192|emb|CBI28843.3| unnamed protein product
            [Vitis vinifera]
          Length = 287

 Score = 71.6 bits (174), Expect = 6e-10
 Identities = 31/52 (59%), Positives = 41/52 (78%)
 Frame = +3

Query: 1224 QVRGFLSALPQYPLHSHGLIDPPKVLADIVESTIGAVFIDSNSSIDITWEVY 1379
            Q+  F  A+ +YPLHS+G I+ PKVLAD+VESTIGAVF+D N S+D  W+V+
Sbjct: 130  QIYEFAEAIKEYPLHSNGQIEVPKVLADVVESTIGAVFVDCNCSVDTVWKVF 181


>ref|XP_003601369.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
            gi|355490417|gb|AES71620.1| Endoribonuclease Dicer-like
            protein [Medicago truncatula]
          Length = 565

 Score = 70.9 bits (172), Expect = 1e-09
 Identities = 30/52 (57%), Positives = 41/52 (78%)
 Frame = +3

Query: 1224 QVRGFLSALPQYPLHSHGLIDPPKVLADIVESTIGAVFIDSNSSIDITWEVY 1379
            Q++ F   + +YPLHS+GLID PK LADIVESTIGA+F+D  SS++  W+V+
Sbjct: 328  QIQEFTKGIAEYPLHSNGLIDVPKSLADIVESTIGAIFVDCGSSVETVWKVF 379


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