BLASTX nr result
ID: Panax21_contig00015049
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00015049
(1710 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-a... 357 5e-96
emb|CBI32804.3| unnamed protein product [Vitis vinifera] 354 4e-95
ref|XP_002871139.1| SNF2 domain-containing protein [Arabidopsis ... 331 3e-88
ref|XP_002308876.1| chromatin remodeling complex subunit [Populu... 331 4e-88
ref|NP_196132.2| DNA/RNA helicase [Arabidopsis thaliana] gi|2026... 330 5e-88
>ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 3-like 1-like
[Vitis vinifera]
Length = 874
Score = 357 bits (916), Expect = 5e-96
Identities = 179/272 (65%), Positives = 207/272 (76%)
Frame = +1
Query: 895 GSSSRSADNSRKKQNGGGTLWDIRNSGRCIGXXXXXVDPSGLKTTLVVCPPSVFATWITQ 1074
G SR A RKK+ T D G + KTTL+VCPPSVF+TW+TQ
Sbjct: 322 GRVSRKASGLRKKRKTDDTPSDDMLKGNSVVS----------KTTLIVCPPSVFSTWVTQ 371
Query: 1075 LGEHTRPGRLRVYLYYAERTKDVTELQKYDLVLTTYSTLGIEESWSESPMFKMEWWRVIL 1254
L EHT P RL+VY+YY RT++ ELQKYD+VLTTYSTL EE+WS SP+ K+EWWRVIL
Sbjct: 372 LLEHTTPKRLKVYMYYGNRTQEAEELQKYDIVLTTYSTLATEEAWSGSPVKKIEWWRVIL 431
Query: 1255 DEAHLIKNANAQQSRAVTKLNAKRRWAVTGTPIQNGTFDLFSLMVFLRFQPFSVRTYWTT 1434
DEAH+IKN NAQQS+AVT L AKRRW VTGTPIQNGTFDLFSLM FLRF+PFS+++YW +
Sbjct: 432 DEAHMIKNVNAQQSQAVTNLRAKRRWVVTGTPIQNGTFDLFSLMAFLRFEPFSIKSYWQS 491
Query: 1435 LVQRPLANGSENGFSRLQAIMATISLRRTEDKVLIGLPPKIIEIYFVDLSAEERELYDRM 1614
LVQRPL G E G SRLQ +MATISLRRT+DK LIGLPPK +E FV+LSAEERELYD+M
Sbjct: 492 LVQRPLGQGKEKGLSRLQVLMATISLRRTKDKGLIGLPPKSVETCFVELSAEERELYDQM 551
Query: 1615 EGEARSVVRDYISANSVTSNYTTVLSIILRLR 1710
E E + V+RDYI A SV NY+TVL IILRLR
Sbjct: 552 EAEGKCVIRDYIDAGSVMRNYSTVLGIILRLR 583
Score = 257 bits (657), Expect = 6e-66
Identities = 135/220 (61%), Positives = 163/220 (74%)
Frame = +1
Query: 1 PLNPHDPHAIAVFNTSELQVGYIERSVAEVLSPLLDQCLITVEGIVPNTPGRSIRCNRYK 180
PLNP+D +AI V NT+ +QVG+I+RS A VL+PL+D L+TVEGIVPNTPG NRY+
Sbjct: 72 PLNPYDRNAIKVLNTTTIQVGHIDRSAAAVLAPLMDANLVTVEGIVPNTPGSG---NRYR 128
Query: 181 IPCQIHIFAGPEGYEMVKSLIFGSGLHLIVQDEAAFGLSEAVIVREANGGMDVKRFDDIF 360
IPCQ+HIFA E + V+S I GL LI + +F LSEAVIV+E + K D+IF
Sbjct: 129 IPCQVHIFAQIEWFPRVRSAISRGGLQLISDSDPSFTLSEAVIVKEKKCDKEFKSLDEIF 188
Query: 361 KLVDENVSKMGFMDVMELPKYVIISELFLHQKEGLA*LVKRENSSELPPFWVERNDGIYI 540
KL ENV+K G ++ ME PK VI SELFLHQKE L LV RENS ELPPFW E+ +G Y+
Sbjct: 189 KLAIENVNKQGALEAMEPPKDVIKSELFLHQKEALGWLVHRENSCELPPFW-EKQNGSYV 247
Query: 541 NELTNYHTDQRPESIRGGIFADDMGLGKTLTLLSLIALDR 660
N LTNY T++RPE +RGGIFADDMGLGKTLTLL LIA D+
Sbjct: 248 NVLTNYQTNKRPEPLRGGIFADDMGLGKTLTLLCLIAFDK 287
>emb|CBI32804.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 354 bits (909), Expect = 4e-95
Identities = 169/230 (73%), Positives = 195/230 (84%)
Frame = +1
Query: 1021 KTTLVVCPPSVFATWITQLGEHTRPGRLRVYLYYAERTKDVTELQKYDLVLTTYSTLGIE 1200
KTTL+VCPPSVF+TW+TQL EHT P RL+VY+YY RT++ ELQKYD+VLTTYSTL E
Sbjct: 246 KTTLIVCPPSVFSTWVTQLLEHTTPKRLKVYMYYGNRTQEAEELQKYDIVLTTYSTLATE 305
Query: 1201 ESWSESPMFKMEWWRVILDEAHLIKNANAQQSRAVTKLNAKRRWAVTGTPIQNGTFDLFS 1380
E+WS SP+ K+EWWRVILDEAH+IKN NAQQS+AVT L AKRRW VTGTPIQNGTFDLFS
Sbjct: 306 EAWSGSPVKKIEWWRVILDEAHMIKNVNAQQSQAVTNLRAKRRWVVTGTPIQNGTFDLFS 365
Query: 1381 LMVFLRFQPFSVRTYWTTLVQRPLANGSENGFSRLQAIMATISLRRTEDKVLIGLPPKII 1560
LM FLRF+PFS+++YW +LVQRPL G E G SRLQ +MATISLRRT+DK LIGLPPK +
Sbjct: 366 LMAFLRFEPFSIKSYWQSLVQRPLGQGKEKGLSRLQVLMATISLRRTKDKGLIGLPPKSV 425
Query: 1561 EIYFVDLSAEERELYDRMEGEARSVVRDYISANSVTSNYTTVLSIILRLR 1710
E FV+LSAEERELYD+ME E + V+RDYI A SV NY+TVL IILRLR
Sbjct: 426 ETCFVELSAEERELYDQMEAEGKCVIRDYIDAGSVMRNYSTVLGIILRLR 475
Score = 108 bits (270), Expect = 4e-21
Identities = 55/101 (54%), Positives = 71/101 (70%)
Frame = +1
Query: 1 PLNPHDPHAIAVFNTSELQVGYIERSVAEVLSPLLDQCLITVEGIVPNTPGRSIRCNRYK 180
PLNP+D +AI V NT+ +QVG+I+RS A VL+PL+D L+TVEGIVPNTPG NRY+
Sbjct: 85 PLNPYDRNAIKVLNTTTIQVGHIDRSAAAVLAPLMDANLVTVEGIVPNTPGSG---NRYR 141
Query: 181 IPCQIHIFAGPEGYEMVKSLIFGSGLHLIVQDEAAFGLSEA 303
IPCQ+HIFA E + V+S I GL LI + +F L +
Sbjct: 142 IPCQVHIFAQIEWFPRVRSAISRGGLQLISDSDPSFTLENS 182
Score = 91.3 bits (225), Expect = 7e-16
Identities = 43/59 (72%), Positives = 50/59 (84%)
Frame = +1
Query: 484 ENSSELPPFWVERNDGIYINELTNYHTDQRPESIRGGIFADDMGLGKTLTLLSLIALDR 660
ENS ELPPFW E+ +G Y+N LTNY T++RPE +RGGIFADDMGLGKTLTLL LIA D+
Sbjct: 180 ENSCELPPFW-EKQNGSYVNVLTNYQTNKRPEPLRGGIFADDMGLGKTLTLLCLIAFDK 237
>ref|XP_002871139.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297316976|gb|EFH47398.1| SNF2 domain-containing
protein [Arabidopsis lyrata subsp. lyrata]
Length = 861
Score = 331 bits (849), Expect = 3e-88
Identities = 160/231 (69%), Positives = 193/231 (83%), Gaps = 1/231 (0%)
Frame = +1
Query: 1021 KTTLVVCPPSVFATWITQLGEHTRPGRLRVYLYYA-ERTKDVTELQKYDLVLTTYSTLGI 1197
KTTL+VCPPSV + WITQL EHT G L+VY+Y+ ERT DV EL KYDLVLTTYSTL +
Sbjct: 338 KTTLIVCPPSVISAWITQLEEHTVQGSLKVYMYHGGERTDDVNELMKYDLVLTTYSTLAV 397
Query: 1198 EESWSESPMFKMEWWRVILDEAHLIKNANAQQSRAVTKLNAKRRWAVTGTPIQNGTFDLF 1377
EESW +SP+ KMEW R+ILDEAH IKNANAQQSR V+KL A RRWAVTGTPIQNG+FDL+
Sbjct: 398 EESWEDSPVKKMEWLRIILDEAHTIKNANAQQSRVVSKLKASRRWAVTGTPIQNGSFDLY 457
Query: 1378 SLMVFLRFQPFSVRTYWTTLVQRPLANGSENGFSRLQAIMATISLRRTEDKVLIGLPPKI 1557
SLM FLRF+PFS+++YW +L+QRPL G++ G SRLQ +MATISLRRT++K LIGLPPK
Sbjct: 458 SLMAFLRFEPFSIKSYWQSLIQRPLGQGNKKGLSRLQVLMATISLRRTKEKSLIGLPPKT 517
Query: 1558 IEIYFVDLSAEERELYDRMEGEARSVVRDYISANSVTSNYTTVLSIILRLR 1710
+E +V+LS EER+LYD MEGEA+ VV++ I+ S+ NY+TVLSIILRLR
Sbjct: 518 VETCYVELSPEERQLYDHMEGEAKGVVQNLINNGSLMRNYSTVLSIILRLR 568
Score = 249 bits (637), Expect = 1e-63
Identities = 135/221 (61%), Positives = 157/221 (71%)
Frame = +1
Query: 1 PLNPHDPHAIAVFNTSELQVGYIERSVAEVLSPLLDQCLITVEGIVPNTPGRSIRCNRYK 180
PLNP+D +AI V NT QVG+IER+VA VL+PL+D I VEGIVPNT S NR+K
Sbjct: 68 PLNPYDNNAIRVLNTRSEQVGHIERTVAAVLAPLIDSHTIIVEGIVPNTRSNS---NRFK 124
Query: 181 IPCQIHIFAGPEGYEMVKSLIFGSGLHLIVQDEAAFGLSEAVIVREANGGMDVKRFDDIF 360
IPCQIH+FA E VKS I GL LI + AFGLSEAV+V+E G D K D IF
Sbjct: 125 IPCQIHVFAKLEASSTVKSTISRGGLVLISDSDTAFGLSEAVVVKEQMGNGDKKSVDKIF 184
Query: 361 KLVDENVSKMGFMDVMELPKYVIISELFLHQKEGLA*LVKRENSSELPPFWVERNDGIYI 540
KLVD NV G + +E P+ VI SELF HQKEGL L+ RE S ELPPFW E DG ++
Sbjct: 185 KLVDRNVKLKGKLVAVEPPREVIKSELFAHQKEGLGWLLYREKSGELPPFW-EEKDGEFL 243
Query: 541 NELTNYHTDQRPESIRGGIFADDMGLGKTLTLLSLIALDRF 663
N LTNY +D+RPE +RGG+FADDMGLGKTLTLLSLIA DR+
Sbjct: 244 NTLTNYRSDKRPEPLRGGVFADDMGLGKTLTLLSLIAFDRY 284
>ref|XP_002308876.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222854852|gb|EEE92399.1| chromatin remodeling complex
subunit [Populus trichocarpa]
Length = 799
Score = 331 bits (848), Expect = 4e-88
Identities = 153/229 (66%), Positives = 198/229 (86%)
Frame = +1
Query: 1024 TTLVVCPPSVFATWITQLGEHTRPGRLRVYLYYAERTKDVTELQKYDLVLTTYSTLGIEE 1203
TTL+VCPP+VF+TWITQL EHT+ G L VY+YY ERT++V EL+K+D+VLTTYSTL E+
Sbjct: 280 TTLIVCPPAVFSTWITQLEEHTQRGSLGVYMYYGERTREVEELKKHDIVLTTYSTLAAED 339
Query: 1204 SWSESPMFKMEWWRVILDEAHLIKNANAQQSRAVTKLNAKRRWAVTGTPIQNGTFDLFSL 1383
W +SP+ K++W RVILDEAH+IKNAN+QQSRAVTKLNAKRRW VTGTPIQNG+ DLFSL
Sbjct: 340 PWEDSPVKKIDWCRVILDEAHVIKNANSQQSRAVTKLNAKRRWVVTGTPIQNGSLDLFSL 399
Query: 1384 MVFLRFQPFSVRTYWTTLVQRPLANGSENGFSRLQAIMATISLRRTEDKVLIGLPPKIIE 1563
M FLRF+PFS+++YW +L+QRPLA G++ G SRLQ +MATISLRRT+DK ++GLP K +E
Sbjct: 400 MAFLRFEPFSIKSYWQSLLQRPLAQGNKKGLSRLQVLMATISLRRTKDKGVVGLPSKTVE 459
Query: 1564 IYFVDLSAEERELYDRMEGEARSVVRDYISANSVTSNYTTVLSIILRLR 1710
++++LS EERELYD+ME EA+ VV+++I+ N++ N++TVL IILRLR
Sbjct: 460 THYIELSGEERELYDQMEAEAKGVVQNFINTNNLMRNFSTVLCIILRLR 508
Score = 258 bits (658), Expect = 4e-66
Identities = 136/220 (61%), Positives = 163/220 (74%)
Frame = +1
Query: 1 PLNPHDPHAIAVFNTSELQVGYIERSVAEVLSPLLDQCLITVEGIVPNTPGRSIRCNRYK 180
PLNP D +A+ V NT LQVG+IERSVA VLSPL+D +I VEGIVPN+ N+YK
Sbjct: 39 PLNPFDQNALKVLNTRCLQVGHIERSVAAVLSPLIDSNMINVEGIVPNSRSGG---NKYK 95
Query: 181 IPCQIHIFAGPEGYEMVKSLIFGSGLHLIVQDEAAFGLSEAVIVREANGGMDVKRFDDIF 360
IPCQ+H+FA E +E VK+ I GL L+ Q E FGLSEA++V+E N +K D+IF
Sbjct: 96 IPCQVHVFARVEDFESVKTAISRGGLVLLSQMEVGFGLSEAMVVKEKNKKSGLKSLDEIF 155
Query: 361 KLVDENVSKMGFMDVMELPKYVIISELFLHQKEGLA*LVKRENSSELPPFWVERNDGIYI 540
KLVDENV+K G + +E PK VI S+LF HQKEGL LV RENS ELPPFW E DG ++
Sbjct: 156 KLVDENVNKKGKLGALEPPKEVIKSQLFEHQKEGLWWLVNRENSGELPPFW-EEKDGEFV 214
Query: 541 NELTNYHTDQRPESIRGGIFADDMGLGKTLTLLSLIALDR 660
N LTNYHT++RPE +RGGIFADDMGLGKTL LLSLIA D+
Sbjct: 215 NVLTNYHTNRRPEPLRGGIFADDMGLGKTLALLSLIAFDK 254
>ref|NP_196132.2| DNA/RNA helicase [Arabidopsis thaliana] gi|20260624|gb|AAM13210.1|
helicase-like transcription factor-like protein
[Arabidopsis thaliana] gi|31711770|gb|AAP68241.1|
At5g05130 [Arabidopsis thaliana]
gi|332003449|gb|AED90832.1| DNA/RNA helicase [Arabidopsis
thaliana]
Length = 862
Score = 330 bits (847), Expect = 5e-88
Identities = 159/231 (68%), Positives = 192/231 (83%), Gaps = 1/231 (0%)
Frame = +1
Query: 1021 KTTLVVCPPSVFATWITQLGEHTRPGRLRVYLYYA-ERTKDVTELQKYDLVLTTYSTLGI 1197
KTTL+VCPPSV + WITQL EHT PG L+VY+Y+ ERT DV EL KYD+VLTTY TL +
Sbjct: 339 KTTLIVCPPSVISAWITQLEEHTVPGILKVYMYHGGERTDDVNELMKYDIVLTTYGTLAV 398
Query: 1198 EESWSESPMFKMEWWRVILDEAHLIKNANAQQSRAVTKLNAKRRWAVTGTPIQNGTFDLF 1377
EESW +SP+ KMEW R+ILDEAH IKNANAQQSR V KL A RRWAVTGTPIQNG+FDL+
Sbjct: 399 EESWEDSPVKKMEWLRIILDEAHTIKNANAQQSRVVCKLKASRRWAVTGTPIQNGSFDLY 458
Query: 1378 SLMVFLRFQPFSVRTYWTTLVQRPLANGSENGFSRLQAIMATISLRRTEDKVLIGLPPKI 1557
SLM FLRF+PFS+++YW +L+QRPL G++ G SRLQ +MATISLRRT++K LIGLPPK
Sbjct: 459 SLMAFLRFEPFSIKSYWQSLIQRPLGQGNKKGLSRLQVLMATISLRRTKEKSLIGLPPKT 518
Query: 1558 IEIYFVDLSAEERELYDRMEGEARSVVRDYISANSVTSNYTTVLSIILRLR 1710
+E +V+LS EER+LYD MEGEA+ VV++ I+ S+ NY+TVLSIILRLR
Sbjct: 519 VETCYVELSPEERQLYDHMEGEAKGVVQNLINNGSLMRNYSTVLSIILRLR 569
Score = 247 bits (631), Expect = 6e-63
Identities = 132/221 (59%), Positives = 158/221 (71%)
Frame = +1
Query: 1 PLNPHDPHAIAVFNTSELQVGYIERSVAEVLSPLLDQCLITVEGIVPNTPGRSIRCNRYK 180
PLN +D +AI V NT QVG+IER+VA VL+P++D I VEGIVPNT S NRY+
Sbjct: 69 PLNVYDNNAIRVLNTRSEQVGHIERTVAAVLAPMIDSHTIVVEGIVPNTRSNS---NRYR 125
Query: 181 IPCQIHIFAGPEGYEMVKSLIFGSGLHLIVQDEAAFGLSEAVIVREANGGMDVKRFDDIF 360
IPCQIH+FA E VKS I GL LI + + +FGLSEAV+V+E G D + D IF
Sbjct: 126 IPCQIHVFAKLEASSTVKSTISRGGLVLISESDTSFGLSEAVVVKEQMGNGDKRSVDKIF 185
Query: 361 KLVDENVSKMGFMDVMELPKYVIISELFLHQKEGLA*LVKRENSSELPPFWVERNDGIYI 540
KLVDENV MG + E P+ VI SELF HQKEGL L+ RE S ELPPFW E DG ++
Sbjct: 186 KLVDENVKLMGKLVAAEPPREVIKSELFAHQKEGLGWLLHREKSGELPPFW-EEKDGEFL 244
Query: 541 NELTNYHTDQRPESIRGGIFADDMGLGKTLTLLSLIALDRF 663
N LTNY +D+RP+ +RGG+FADDMGLGKTLTLLSLIA DR+
Sbjct: 245 NTLTNYRSDKRPDPLRGGVFADDMGLGKTLTLLSLIAFDRY 285