BLASTX nr result

ID: Panax21_contig00015037 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015037
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543596.1| PREDICTED: WD-40 repeat-containing protein M...    74   1e-11
ref|XP_003597606.1| WD-40 repeat-containing protein MSI4 [Medica...    74   1e-11
ref|XP_003632850.1| PREDICTED: WD-40 repeat-containing protein M...    72   5e-11
emb|CAN70589.1| hypothetical protein VITISV_026731 [Vitis vinifera]    72   5e-11
gb|AAD03340.1| WD-40 repeat protein MSI4 [Arabidopsis thaliana]        72   6e-11

>ref|XP_003543596.1| PREDICTED: WD-40 repeat-containing protein MSI4-like [Glycine max]
          Length = 453

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 36/62 (58%), Positives = 40/62 (64%)
 Frame = -1

Query: 370 FRHSGHRDKVVDFHFNASDPWTIXXXXXXXXXXXXXXTLQIWRMIDLIYRPXXXXXXXXE 191
           FRH+GHRDKVVDFH+NASDPWTI              TLQIWRM+DLIYRP        +
Sbjct: 383 FRHAGHRDKVVDFHWNASDPWTIVSVSDDCESSGGGGTLQIWRMMDLIYRPEEEVLTELD 442

Query: 190 KF 185
           KF
Sbjct: 443 KF 444


>ref|XP_003597606.1| WD-40 repeat-containing protein MSI4 [Medicago truncatula]
           gi|124360382|gb|ABN08395.1| WD40-like [Medicago
           truncatula] gi|355486654|gb|AES67857.1| WD-40
           repeat-containing protein MSI4 [Medicago truncatula]
          Length = 479

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 36/62 (58%), Positives = 40/62 (64%)
 Frame = -1

Query: 370 FRHSGHRDKVVDFHFNASDPWTIXXXXXXXXXXXXXXTLQIWRMIDLIYRPXXXXXXXXE 191
           FRH+GHRDKVVDFH+NASDPWTI              TLQIWRM+DLIYRP        +
Sbjct: 395 FRHAGHRDKVVDFHWNASDPWTIVSVSDDCASTGGGGTLQIWRMMDLIYRPEDEVMAELD 454

Query: 190 KF 185
           KF
Sbjct: 455 KF 456


>ref|XP_003632850.1| PREDICTED: WD-40 repeat-containing protein MSI4-like [Vitis
           vinifera] gi|297743080|emb|CBI35947.3| unnamed protein
           product [Vitis vinifera]
          Length = 453

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 34/50 (68%), Positives = 36/50 (72%)
 Frame = -1

Query: 370 FRHSGHRDKVVDFHFNASDPWTIXXXXXXXXXXXXXXTLQIWRMIDLIYR 221
           FRH+GHRDKVVDFH+NASDPWTI              TLQIWRMIDLIYR
Sbjct: 383 FRHAGHRDKVVDFHWNASDPWTIVSVSDDGESTGGGGTLQIWRMIDLIYR 432


>emb|CAN70589.1| hypothetical protein VITISV_026731 [Vitis vinifera]
          Length = 462

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 34/50 (68%), Positives = 36/50 (72%)
 Frame = -1

Query: 370 FRHSGHRDKVVDFHFNASDPWTIXXXXXXXXXXXXXXTLQIWRMIDLIYR 221
           FRH+GHRDKVVDFH+NASDPWTI              TLQIWRMIDLIYR
Sbjct: 392 FRHAGHRDKVVDFHWNASDPWTIVSVSDDGESTGGGGTLQIWRMIDLIYR 441


>gb|AAD03340.1| WD-40 repeat protein MSI4 [Arabidopsis thaliana]
          Length = 457

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 35/62 (56%), Positives = 38/62 (61%)
 Frame = -1

Query: 370 FRHSGHRDKVVDFHFNASDPWTIXXXXXXXXXXXXXXTLQIWRMIDLIYRPXXXXXXXXE 191
           F+H+GHRDKVVDFH+NASDPWTI              TLQIWRM DLIYRP         
Sbjct: 385 FQHAGHRDKVVDFHWNASDPWTIVSVSDDCETTGGGGTLQIWRMSDLIYRPEEEVVAELA 444

Query: 190 KF 185
           KF
Sbjct: 445 KF 446


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