BLASTX nr result

ID: Panax21_contig00015017 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015017
         (1103 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278786.1| PREDICTED: ATP-dependent zinc metalloproteas...   305   1e-80
ref|XP_002303302.1| predicted protein [Populus trichocarpa] gi|2...   265   2e-68
ref|NP_566541.1| AAA-type ATPase family protein [Arabidopsis tha...   264   3e-68
gb|AAB63647.1| cell division protein FtsH isolog [Arabidopsis th...   263   4e-68
ref|XP_002885132.1| EMB2083 [Arabidopsis lyrata subsp. lyrata] g...   263   6e-68

>ref|XP_002278786.1| PREDICTED: ATP-dependent zinc metalloprotease FtsH-like [Vitis
            vinifera]
          Length = 888

 Score =  305 bits (782), Expect = 1e-80
 Identities = 160/319 (50%), Positives = 214/319 (67%), Gaps = 14/319 (4%)
 Frame = +3

Query: 189  MACNCILTSSFLPSLPFHNHPQIRLIRHSLHVRPAI-TCNLGNSK------TDEEEFRSK 347
            MA +CIL S   P LPF + P+IR    +L +RP I + +   S+       D+E  ++K
Sbjct: 1    MASHCILNSPHFPCLPFLSRPKIRTKTKNLAIRPPIISYHFSTSQPQEYEDNDKESKKAK 60

Query: 348  NDRLNLLKLSVTITVVSAALPQPSIAAKVSKRS----KKTKSIEALTPQELKTWSQGLPV 515
             +  N L LS+T+T++SA+LPQPS+AA  + +S    + ++  EALTPQELK+W++GLPV
Sbjct: 61   QNPCNFLNLSITLTIISASLPQPSLAAAAAGKSAGKKRSSRKPEALTPQELKSWTEGLPV 120

Query: 516  VANRIPYTEILNLKQEGKLKHIIK---SPNVGLKQRPEVVLAVLDDSRVLRIVLPSIETD 686
            V +R+PYT+IL+LK+EGKLKH+IK    P VGL+QR E VL VL+DSRVLR V+PS+E D
Sbjct: 121  VTDRVPYTDILDLKREGKLKHVIKPPGGPGVGLRQRAEAVLVVLEDSRVLRTVVPSVEKD 180

Query: 687  PKFWASWDELNIVSLCVNAFSPPLKKPEIPSPYLGFLSKVPQWMFSFVKPKPQSKKVLEL 866
             +FW  WDEL I S+CVNA+SPP+K PE+P PYLGFLS++P +MFSFVKPKP SK+ +E+
Sbjct: 181  RRFWEMWDELKIDSVCVNAYSPPVKGPELPVPYLGFLSRIPAYMFSFVKPKPVSKRAMEI 240

Query: 867  KRAREELKRQRDXXXXXXXXXXXXXXXXXXXXXXXXDRNKKREQQMIKYEESMRQARKDS 1046
            KR REELKR R                         ++  +RE +  KYEES R AR+  
Sbjct: 241  KREREELKRNRKKELVGMREEREMMEKAIRVQKRMEEKRIRRELKKKKYEESTRDARRKY 300

Query: 1047 QHMAGVWENLARDSNVSTA 1103
            + MA  W NLA DSNV+TA
Sbjct: 301  ERMANFWANLAADSNVATA 319


>ref|XP_002303302.1| predicted protein [Populus trichocarpa] gi|222840734|gb|EEE78281.1|
            predicted protein [Populus trichocarpa]
          Length = 844

 Score =  265 bits (676), Expect = 2e-68
 Identities = 134/266 (50%), Positives = 179/266 (67%), Gaps = 7/266 (2%)
 Frame = +3

Query: 324  DEEEFRSKNDRLNLLKLSVTITVVSAAL-PQPSIAAKVS------KRSKKTKSIEALTPQ 482
            ++ E  +K    + L L +T+T++S +L P P+ AA  +      K++ K    EALTP 
Sbjct: 13   NKTENTNKKTHFSFLSLPITLTIISTSLTPHPAFAATPTPKTYHKKKTLKKTQQEALTPD 72

Query: 483  ELKTWSQGLPVVANRIPYTEILNLKQEGKLKHIIKSPNVGLKQRPEVVLAVLDDSRVLRI 662
            +LK WSQ LPVV+NRIPYT++L LK+  KLKH+IK+PN  LKQRPE VL VLDD++V R 
Sbjct: 73   QLKQWSQNLPVVSNRIPYTQVLILKENNKLKHVIKAPNASLKQRPEAVLVVLDDNQVFRT 132

Query: 663  VLPSIETDPKFWASWDELNIVSLCVNAFSPPLKKPEIPSPYLGFLSKVPQWMFSFVKPKP 842
            VLPS+E++ +FW SWDE  I +LCVNA+SPP+K+PE+P PYLGFL KVP++M S +KPK 
Sbjct: 133  VLPSLESNRRFWDSWDEFKIDALCVNAYSPPVKRPELPKPYLGFLWKVPEFMLSRLKPKK 192

Query: 843  QSKKVLELKRAREELKRQRDXXXXXXXXXXXXXXXXXXXXXXXXDRNKKREQQMIKYEES 1022
            +SK+ +EL+ AREE KRQR                         DR +KRE +  KYEES
Sbjct: 193  ESKRAMELRMAREEFKRQRKEELKKMREEREIIEKAIKMQKKDEDRRRKRETRTKKYEES 252

Query: 1023 MRQARKDSQHMAGVWENLARDSNVST 1100
            +R ARK+   MA +W NLA+DSNV+T
Sbjct: 253  LRDARKNYTRMASMWANLAQDSNVTT 278


>ref|NP_566541.1| AAA-type ATPase family protein [Arabidopsis thaliana]
            gi|332642273|gb|AEE75794.1| AAA-type ATPase family
            protein [Arabidopsis thaliana]
          Length = 876

 Score =  264 bits (675), Expect = 3e-68
 Identities = 148/313 (47%), Positives = 207/313 (66%), Gaps = 8/313 (2%)
 Frame = +3

Query: 189  MACNCILTSSFLPSLPFHNHPQIRLIRHSLHVRPAITCNLGNSKTD------EEEFRSKN 350
            MAC   L SS  PS       + RL R+     P+I+C   NS T+      ++  ++K 
Sbjct: 1    MACRFPLHSSS-PSQFLSPENRQRLPRNY----PSISCQ-NNSATNVVHEDGDDNDKAKT 54

Query: 351  DRLNLLKLSVTITVVSAALPQPSIAA-KVSKRSK-KTKSIEALTPQELKTWSQGLPVVAN 524
            +++NLL + +T+T++SA+L +PS AA KV++R + + K  EALT ++LK WS+ LPVV+N
Sbjct: 55   NQVNLLAIPITLTIISASLAKPSFAAAKVTERKRTQKKPQEALTLEQLKAWSKDLPVVSN 114

Query: 525  RIPYTEILNLKQEGKLKHIIKSPNVGLKQRPEVVLAVLDDSRVLRIVLPSIETDPKFWAS 704
            RIPYT+IL+LK EGKLKH+IK PN+ L+Q+ E VL VL+DSRVLR VLPS+E + +FW  
Sbjct: 115  RIPYTDILSLKAEGKLKHVIKPPNLSLRQKAEPVLVVLEDSRVLRTVLPSLEGNKRFWEQ 174

Query: 705  WDELNIVSLCVNAFSPPLKKPEIPSPYLGFLSKVPQWMFSFVKPKPQSKKVLELKRAREE 884
            WDEL I   CVNA++PP+K+P +PSPYLGFL KVP +M ++VKPK +SK+  ELKR RE+
Sbjct: 175  WDELGIDVQCVNAYTPPVKRPPVPSPYLGFLWKVPAYMLTWVKPKKESKRAAELKRMRED 234

Query: 885  LKRQRDXXXXXXXXXXXXXXXXXXXXXXXXDRNKKREQQMIKYEESMRQARKDSQHMAGV 1064
             KRQR                         +R K++  +  KYEES+R+ARK+ + MA +
Sbjct: 235  FKRQRKEEIETMKEERVMMEKTMKAQKKQQERKKRKAVRKKKYEESLREARKNYRDMADM 294

Query: 1065 WENLARDSNVSTA 1103
            W  LA+D NV+TA
Sbjct: 295  WARLAQDPNVATA 307


>gb|AAB63647.1| cell division protein FtsH isolog [Arabidopsis thaliana]
          Length = 983

 Score =  263 bits (673), Expect = 4e-68
 Identities = 138/291 (47%), Positives = 200/291 (68%), Gaps = 2/291 (0%)
 Frame = +3

Query: 237  FHNHPQIRLIRHSLHVRPAITCNLGNSKTDEEEFRSKNDRLNLLKLSVTITVVSAALPQP 416
            F ++P+I L  H+  ++     N+ +   D+ + ++K +++NLL + +T+T++SA+L +P
Sbjct: 183  FIDYPEITLQSHAKTIQLP---NVVHEDGDDND-KAKTNQVNLLAIPITLTIISASLAKP 238

Query: 417  SIAA-KVSKRSK-KTKSIEALTPQELKTWSQGLPVVANRIPYTEILNLKQEGKLKHIIKS 590
            S AA KV++R + + K  EALT ++LK WS+ LPVV+NRIPYT+IL+LK EGKLKH+IK 
Sbjct: 239  SFAAAKVTERKRTQKKPQEALTLEQLKAWSKDLPVVSNRIPYTDILSLKAEGKLKHVIKP 298

Query: 591  PNVGLKQRPEVVLAVLDDSRVLRIVLPSIETDPKFWASWDELNIVSLCVNAFSPPLKKPE 770
            PN+ L+Q+ E VL VL+DSRVLR VLPS+E + +FW  WDEL I   CVNA++PP+K+P 
Sbjct: 299  PNLSLRQKAEPVLVVLEDSRVLRTVLPSLEGNKRFWEQWDELGIDVQCVNAYTPPVKRPP 358

Query: 771  IPSPYLGFLSKVPQWMFSFVKPKPQSKKVLELKRAREELKRQRDXXXXXXXXXXXXXXXX 950
            +PSPYLGFL KVP +M ++VKPK +SK+  ELKR RE+ KRQR                 
Sbjct: 359  VPSPYLGFLWKVPAYMLTWVKPKKESKRAAELKRMREDFKRQRKEEIETMKEERVMMEKT 418

Query: 951  XXXXXXXXDRNKKREQQMIKYEESMRQARKDSQHMAGVWENLARDSNVSTA 1103
                    +R K++  +  KYEES+R+ARK+ + MA +W  LA+D NV+TA
Sbjct: 419  MKAQKKQQERKKRKAVRKKKYEESLREARKNYRDMADMWARLAQDPNVATA 469


>ref|XP_002885132.1| EMB2083 [Arabidopsis lyrata subsp. lyrata]
            gi|297330972|gb|EFH61391.1| EMB2083 [Arabidopsis lyrata
            subsp. lyrata]
          Length = 874

 Score =  263 bits (672), Expect = 6e-68
 Identities = 140/302 (46%), Positives = 198/302 (65%), Gaps = 12/302 (3%)
 Frame = +3

Query: 234  PFHNHPQIRLIRHSLHVR-----PAITCNLGNSKTD-----EEEFRSKNDRLNLLKLSVT 383
            P H+ P  + +      R     P+I+C   N+  D     +E  + K  ++NLL + +T
Sbjct: 6    PLHSSPPSQFLSPENRQRLPRNYPSISCQ--NNSADVHDDGDENEKVKTSQVNLLAIPIT 63

Query: 384  ITVVSAALPQPSIAA-KVSKRSK-KTKSIEALTPQELKTWSQGLPVVANRIPYTEILNLK 557
            +TV+SA+L QPS AA KVS+R + + K  EALT ++LK WS+ LPVV+NRIPYT+IL+LK
Sbjct: 64   LTVISASLAQPSFAAAKVSERKRTQKKPQEALTIEQLKAWSKDLPVVSNRIPYTDILSLK 123

Query: 558  QEGKLKHIIKSPNVGLKQRPEVVLAVLDDSRVLRIVLPSIETDPKFWASWDELNIVSLCV 737
             +GKLKH+IK PN+ L+Q+ E VL VL+DSRVLR VLPS+E + +FW  WDEL I   CV
Sbjct: 124  AQGKLKHVIKPPNLSLRQKAEPVLVVLEDSRVLRTVLPSLEGNKRFWEEWDELGIDGQCV 183

Query: 738  NAFSPPLKKPEIPSPYLGFLSKVPQWMFSFVKPKPQSKKVLELKRAREELKRQRDXXXXX 917
            NA++PP+K+P +PSPYLGFL KVP +M ++VKPK +SK+  ELK+ RE+ KRQR      
Sbjct: 184  NAYTPPVKRPPVPSPYLGFLWKVPAYMLTWVKPKKESKRAAELKKMREDFKRQRKEEIER 243

Query: 918  XXXXXXXXXXXXXXXXXXXDRNKKREQQMIKYEESMRQARKDSQHMAGVWENLARDSNVS 1097
                               +R K++  +  KYEES+R+AR++ + MA +W  +A+D NV+
Sbjct: 244  MKEERAMMEKTMKAQKKQQERKKRKAVRKKKYEESLREARRNYRDMADMWARMAQDPNVA 303

Query: 1098 TA 1103
            TA
Sbjct: 304  TA 305


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