BLASTX nr result

ID: Panax21_contig00015002 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015002
         (894 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285475.1| PREDICTED: transcription factor bHLH74 [Viti...   143   6e-32
emb|CAN60403.1| hypothetical protein VITISV_034133 [Vitis vinifera]   143   6e-32
gb|ABN51065.1| basic helix-loop-helix protein [Sesamum indicum]       115   1e-23
ref|XP_002510047.1| DNA binding protein, putative [Ricinus commu...    96   1e-17
ref|XP_002306505.1| predicted protein [Populus trichocarpa] gi|2...    89   1e-15

>ref|XP_002285475.1| PREDICTED: transcription factor bHLH74 [Vitis vinifera]
           gi|302142156|emb|CBI19359.3| unnamed protein product
           [Vitis vinifera]
          Length = 430

 Score =  143 bits (360), Expect = 6e-32
 Identities = 77/136 (56%), Positives = 94/136 (69%), Gaps = 11/136 (8%)
 Frame = -3

Query: 376 MGTEDNGDMRFQQRDGD------GTMNRNPLSEKVAEMGMRSGSIFKGSNGAESYFGSGW 215
           MG +DNG+M F              MN +P+SEKV  M M S S++K SNG + +FGSGW
Sbjct: 1   MGIDDNGNMGFPNTSQSILNCPSSGMNTHPISEKVTGMTMSSASMYKSSNGGDPFFGSGW 60

Query: 214 DPLVSLSQSENFG-----AHNGFSNPAYPVVMENQVMSTTSHLVHYQSDSGGLGEMVPKL 50
           DP+VSLSQ+ENFG     +H+ F+N AYPVV+ENQ + +T HLV Y S+S  L EMVPKL
Sbjct: 61  DPIVSLSQNENFGGSSMVSHSEFANSAYPVVLENQGIGSTPHLVLYPSNS-SLVEMVPKL 119

Query: 49  SCFGSGSFSEMVNSFG 2
            CFGSGSFSEMV SFG
Sbjct: 120 PCFGSGSFSEMVASFG 135


>emb|CAN60403.1| hypothetical protein VITISV_034133 [Vitis vinifera]
          Length = 484

 Score =  143 bits (360), Expect = 6e-32
 Identities = 77/136 (56%), Positives = 94/136 (69%), Gaps = 11/136 (8%)
 Frame = -3

Query: 376 MGTEDNGDMRFQQRDGD------GTMNRNPLSEKVAEMGMRSGSIFKGSNGAESYFGSGW 215
           MG +DNG+M F              MN +P+SEKV  M M S S++K SNG + +FGSGW
Sbjct: 1   MGIDDNGNMGFPNTSQSILNCPSSGMNTHPISEKVTGMTMSSASMYKSSNGGDPFFGSGW 60

Query: 214 DPLVSLSQSENFG-----AHNGFSNPAYPVVMENQVMSTTSHLVHYQSDSGGLGEMVPKL 50
           DP+VSLSQ+ENFG     +H+ F+N AYPVV+ENQ + +T HLV Y S+S  L EMVPKL
Sbjct: 61  DPIVSLSQNENFGGSSMVSHSEFANSAYPVVLENQGIGSTPHLVLYPSNS-SLVEMVPKL 119

Query: 49  SCFGSGSFSEMVNSFG 2
            CFGSGSFSEMV SFG
Sbjct: 120 PCFGSGSFSEMVASFG 135


>gb|ABN51065.1| basic helix-loop-helix protein [Sesamum indicum]
          Length = 400

 Score =  115 bits (289), Expect = 1e-23
 Identities = 64/132 (48%), Positives = 85/132 (64%), Gaps = 13/132 (9%)
 Frame = -3

Query: 358 GDMRFQQRDGDGTMN-------RNPLSEKVAEMGMRSGSIFKGSNGAESYFGS-GWDPLV 203
           GD  FQ R+    +N          +S+ VA M + S S+FK  NG + ++ S GWDP++
Sbjct: 2   GDRVFQHRNSSSILNCPSSVMATTSISDNVAGMSICSESMFKPPNGIDPFYSSSGWDPVI 61

Query: 202 SLSQSENFG-----AHNGFSNPAYPVVMENQVMSTTSHLVHYQSDSGGLGEMVPKLSCFG 38
           S  QS NFG       N F+NP YPV++ENQ M ++SHLVH+ SDSG +G MVPK+  FG
Sbjct: 62  SQDQSGNFGNSSMVLQNEFANPNYPVLLENQTMGSSSHLVHFPSDSGLVG-MVPKIPSFG 120

Query: 37  SGSFSEMVNSFG 2
           SGSFSE+V+SFG
Sbjct: 121 SGSFSEIVSSFG 132


>ref|XP_002510047.1| DNA binding protein, putative [Ricinus communis]
           gi|223550748|gb|EEF52234.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 408

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 60/130 (46%), Positives = 76/130 (58%), Gaps = 5/130 (3%)
 Frame = -3

Query: 376 MGT-EDNGDMRFQQRDGDGTMNRNPLSEKVAEMGMRSGSIFKGSNGAESYFGSGWDPLVS 200
           MGT EDN +    Q  G+  MN           GM           A  +F   WDP+VS
Sbjct: 1   MGTSEDNNEGMAFQSGGESVMN-------CQSSGM----------SANPFFPPAWDPVVS 43

Query: 199 LSQSENFGA----HNGFSNPAYPVVMENQVMSTTSHLVHYQSDSGGLGEMVPKLSCFGSG 32
           L+Q ENFGA     + F+N  Y +VMENQ ++++SHLVHYQSDS  + E+VPK   +GSG
Sbjct: 44  LNQHENFGASMVSQSEFTNSHYAIVMENQGINSSSHLVHYQSDSSYV-ELVPKFPSYGSG 102

Query: 31  SFSEMVNSFG 2
           SFSEMV+SFG
Sbjct: 103 SFSEMVSSFG 112


>ref|XP_002306505.1| predicted protein [Populus trichocarpa] gi|222855954|gb|EEE93501.1|
           predicted protein [Populus trichocarpa]
          Length = 407

 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 54/116 (46%), Positives = 69/116 (59%), Gaps = 5/116 (4%)
 Frame = -3

Query: 334 DGDGTMNRNPLSEKVAEMGMRSGSIFKGSNGAESYFGSGWDPLVSLSQSENFG-----AH 170
           DG G  N +   +   E  M+  S    +N    ++ S WDP+VSLSQ  NFG     + 
Sbjct: 2   DGSGDNNGDLGYQNRVESVMKCPSSGMNTN---PFYVSAWDPVVSLSQLGNFGGSSTGSQ 58

Query: 169 NGFSNPAYPVVMENQVMSTTSHLVHYQSDSGGLGEMVPKLSCFGSGSFSEMVNSFG 2
           + FSN  +P+VMEN  +S T HLVHY SDSG + E+VPK   FGSG+FSEMV S G
Sbjct: 59  SEFSNSPFPIVMENPGISNTCHLVHYPSDSGFV-ELVPKFPGFGSGNFSEMVGSVG 113


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