BLASTX nr result

ID: Panax21_contig00014979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014979
         (512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263076.1| PREDICTED: protein HIRA [Vitis vinifera] gi|...   161   1e-42
ref|XP_004149254.1| PREDICTED: protein HIRA-like [Cucumis sativus]    153   3e-40
ref|XP_002875661.1| predicted protein [Arabidopsis lyrata subsp....   151   3e-39
ref|NP_190039.2| protein HIRA/HIR1 [Arabidopsis thaliana] gi|332...   151   4e-39
emb|CAB88535.1| WD repeat domain protein [Arabidopsis thaliana]       151   4e-39

>ref|XP_002263076.1| PREDICTED: protein HIRA [Vitis vinifera] gi|296084943|emb|CBI28352.3|
            unnamed protein product [Vitis vinifera]
          Length = 1036

 Score =  161 bits (407), Expect(2) = 1e-42
 Identities = 77/93 (82%), Positives = 81/93 (87%)
 Frame = -1

Query: 512  LARKPGWSRVTDDGVQTHGHLEEQLASALALKSPDEYHQCLLSYIRFLAREADESRLREV 333
            LARKPGW+RVTDDGVQT  HLE QLAS+LALKS +EY QCLL+YIRFLAREADESRLREV
Sbjct: 827  LARKPGWNRVTDDGVQTRAHLESQLASSLALKSANEYRQCLLAYIRFLAREADESRLREV 886

Query: 332  CESFLGPPVGMAGATTSDPKNPTWDPYVLGMKK 234
            CESFLGPP GM  A  SDPKNP WDP VLGMKK
Sbjct: 887  CESFLGPPTGMVEAIPSDPKNPAWDPCVLGMKK 919



 Score = 37.4 bits (85), Expect(2) = 1e-42
 Identities = 18/29 (62%), Positives = 22/29 (75%)
 Frame = -3

Query: 249  AWNEKVQRLLNEFIDLLLEHENTASDSSS 163
            A N KVQRLLNEF+DLL E+E+  S+  S
Sbjct: 932  ASNRKVQRLLNEFMDLLSEYESAESNQDS 960


>ref|XP_004149254.1| PREDICTED: protein HIRA-like [Cucumis sativus]
          Length = 1033

 Score =  153 bits (386), Expect(2) = 3e-40
 Identities = 74/93 (79%), Positives = 79/93 (84%)
 Frame = -1

Query: 512  LARKPGWSRVTDDGVQTHGHLEEQLASALALKSPDEYHQCLLSYIRFLAREADESRLREV 333
            LARKPGWSRVTDDG+QT  HLE Q+ASALALKSP+EY Q LLSYIRFLAREADESRLREV
Sbjct: 830  LARKPGWSRVTDDGMQTRAHLETQMASALALKSPNEYRQWLLSYIRFLAREADESRLREV 889

Query: 332  CESFLGPPVGMAGATTSDPKNPTWDPYVLGMKK 234
            CES LGPP GMAG   +D KN  WDP VLGM+K
Sbjct: 890  CESLLGPPTGMAGDALADSKNQAWDPCVLGMRK 922



 Score = 37.4 bits (85), Expect(2) = 3e-40
 Identities = 19/36 (52%), Positives = 23/36 (63%)
 Frame = -3

Query: 249  AWNEKVQRLLNEFIDLLLEHENTASDSSS*VCAPCS 142
            A N KVQRLLNEF+DLL E+EN  ++       P S
Sbjct: 935  ASNRKVQRLLNEFMDLLSEYENNENNIDPKASLPAS 970


>ref|XP_002875661.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297321499|gb|EFH51920.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 1017

 Score =  151 bits (382), Expect(2) = 3e-39
 Identities = 71/93 (76%), Positives = 83/93 (89%)
 Frame = -1

Query: 512  LARKPGWSRVTDDGVQTHGHLEEQLASALALKSPDEYHQCLLSYIRFLAREADESRLREV 333
            +ARKPGW+R+TDDG+QT  HLE QLAS+LAL+SP+EY QCLL+Y+RFLAREADESRLREV
Sbjct: 811  MARKPGWNRITDDGMQTRAHLESQLASSLALESPNEYRQCLLAYVRFLAREADESRLREV 870

Query: 332  CESFLGPPVGMAGATTSDPKNPTWDPYVLGMKK 234
            CESFLGPP GMA A +SD  N +WDPYVLG+KK
Sbjct: 871  CESFLGPPTGMAEAASSD-TNLSWDPYVLGVKK 902



 Score = 35.4 bits (80), Expect(2) = 3e-39
 Identities = 17/22 (77%), Positives = 19/22 (86%)
 Frame = -3

Query: 249 AWNEKVQRLLNEFIDLLLEHEN 184
           A N KVQRLLNEFIDLL E+E+
Sbjct: 915 ASNRKVQRLLNEFIDLLSEYED 936


>ref|NP_190039.2| protein HIRA/HIR1 [Arabidopsis thaliana] gi|332644389|gb|AEE77910.1|
            protein HIRA/HIR1 [Arabidopsis thaliana]
          Length = 1058

 Score =  151 bits (381), Expect(2) = 4e-39
 Identities = 71/93 (76%), Positives = 82/93 (88%)
 Frame = -1

Query: 512  LARKPGWSRVTDDGVQTHGHLEEQLASALALKSPDEYHQCLLSYIRFLAREADESRLREV 333
            +ARKPGW+R+TDDG QT  HLE QLAS+LAL+SP+EY QCLL+Y+RFLAREADESRLREV
Sbjct: 852  MARKPGWNRITDDGTQTRAHLESQLASSLALESPNEYRQCLLAYVRFLAREADESRLREV 911

Query: 332  CESFLGPPVGMAGATTSDPKNPTWDPYVLGMKK 234
            CESFLGPP GMA A +SD  N +WDPYVLG+KK
Sbjct: 912  CESFLGPPTGMAEAASSD-TNLSWDPYVLGVKK 943



 Score = 35.4 bits (80), Expect(2) = 4e-39
 Identities = 17/22 (77%), Positives = 19/22 (86%)
 Frame = -3

Query: 249  AWNEKVQRLLNEFIDLLLEHEN 184
            A N KVQRLLNEFIDLL E+E+
Sbjct: 956  ASNRKVQRLLNEFIDLLSEYED 977


>emb|CAB88535.1| WD repeat domain protein [Arabidopsis thaliana]
          Length = 1051

 Score =  151 bits (381), Expect(2) = 4e-39
 Identities = 71/93 (76%), Positives = 82/93 (88%)
 Frame = -1

Query: 512  LARKPGWSRVTDDGVQTHGHLEEQLASALALKSPDEYHQCLLSYIRFLAREADESRLREV 333
            +ARKPGW+R+TDDG QT  HLE QLAS+LAL+SP+EY QCLL+Y+RFLAREADESRLREV
Sbjct: 845  MARKPGWNRITDDGTQTRAHLESQLASSLALESPNEYRQCLLAYVRFLAREADESRLREV 904

Query: 332  CESFLGPPVGMAGATTSDPKNPTWDPYVLGMKK 234
            CESFLGPP GMA A +SD  N +WDPYVLG+KK
Sbjct: 905  CESFLGPPTGMAEAASSD-TNLSWDPYVLGVKK 936



 Score = 35.4 bits (80), Expect(2) = 4e-39
 Identities = 17/22 (77%), Positives = 19/22 (86%)
 Frame = -3

Query: 249  AWNEKVQRLLNEFIDLLLEHEN 184
            A N KVQRLLNEFIDLL E+E+
Sbjct: 949  ASNRKVQRLLNEFIDLLSEYED 970


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