BLASTX nr result

ID: Panax21_contig00014962 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014962
         (1223 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycin...   159   2e-36
ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncat...   157   5e-36
ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23...   154   3e-35
emb|CAN70931.1| hypothetical protein VITISV_034638 [Vitis vinifera]   132   2e-28
ref|XP_002312730.1| predicted protein [Populus trichocarpa] gi|2...   124   4e-26

>ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycine max]
           gi|255637050|gb|ACU18857.1| unknown [Glycine max]
          Length = 406

 Score =  159 bits (401), Expect = 2e-36
 Identities = 89/200 (44%), Positives = 121/200 (60%), Gaps = 5/200 (2%)
 Frame = -1

Query: 587 DSTPLPYLPIGIITKILERLPVKSLLRFRSVCKSWRFLISSPKFVKTHMGLCTKNTEF-- 414
           +S PLP+LP  ++ +IL RLPVKSLL+FR VCKSW  LIS P F+K H+ L ++ T F  
Sbjct: 42  ESLPLPFLPDELVVEILSRLPVKSLLQFRCVCKSWMSLISDPYFMKKHLHLSSRCTHFTH 101

Query: 413 HQLILSYDISGFELKRCPLYSVPNEPHAVELPHL-FGIPSPRATFCIEGSCNGLVCITID 237
           H++ILS   + F LK C L S+ N P +     L + + +      I GSCNGL+C  I 
Sbjct: 102 HRIILSATTAEFHLKSCSLSSLFNNPSSTVCDDLNYPVKNKFRHDGIVGSCNGLLCFAIK 161

Query: 236 VDNLYLWNPSTREGKKLRLPDVEKKYR--CIDRYGLGYDDFSDDYKVVGVFVGMFDLVQK 63
            D + LWNPS R  KK   P +   +R  C   +GLGYD  ++DYKVV VF    +   +
Sbjct: 162 GDCVLLWNPSIRVSKK--SPPLGNNWRPGCFTAFGLGYDHVNEDYKVVAVFCDPSEYFIE 219

Query: 62  YQVWIYSVKAGSWRRIRDFP 3
            +V +YS+   SWR+I+DFP
Sbjct: 220 CKVKVYSMATNSWRKIQDFP 239



 Score = 89.0 bits (219), Expect = 2e-15
 Identities = 59/162 (36%), Positives = 88/162 (54%), Gaps = 2/162 (1%)
 Frame = -3

Query: 1206 NDGVYANGALHWVAKRHRTPRVRCPSHIISLDLRDETYREVALPTYG-DGKFTFSVGALG 1030
            N G + +G L+W A     P       I+SLDL  ETYREV  P Y  +   T S+G L 
Sbjct: 247  NSGKFVSGTLNWAANHSIGPSSFWV--IVSLDLHKETYREVLPPDYEKEDCSTPSLGVLQ 304

Query: 1029 GSLIVRCACG-SRVDLWLMKEYSVAKSWTKMVSIPYLMSPMKYICSMPLCILKNGAILFK 853
            G L +      +   +W+MK+Y V +SW K+VSIPY+ +P  +  S P  I +NG +L  
Sbjct: 305  GCLCMNYDYKKTHFVVWMMKDYGVRESWVKLVSIPYVPNPEDFSYSGPYYISENGKVLLM 364

Query: 852  SEKCTVLYNSKDNTLKDCEINNFRMNYRHLLVDTYVESLVSP 727
             E   +LY+ ++N+ K  +I + +  +     + YVE+LVSP
Sbjct: 365  FEFDLILYDPRNNSFKYPKIESGKGWFD---AEVYVETLVSP 403


>ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355483131|gb|AES64334.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 366

 Score =  157 bits (397), Expect = 5e-36
 Identities = 86/197 (43%), Positives = 117/197 (59%), Gaps = 5/197 (2%)
 Frame = -1

Query: 578 PLPYLPIGIITKILERLPVKSLLRFRSVCKSWRFLISSPKFVKTHMGLCTKNTEF---HQ 408
           PLP+LP  +I +IL +LP+KSLLRFR VCKSW  +IS+P F+K  +   T+NT F   H+
Sbjct: 4   PLPFLPEELILEILIKLPIKSLLRFRCVCKSWLHIISNPYFIKKQLHFSTQNTHFTTNHR 63

Query: 407 LILSYDISGFELKRCPLYSVPNEPHAVELPHLFGIPSPRATFCIEGSCNGLVCITIDVDN 228
           +ILS   + F LK C + S+ N P  V     + + +      I GSCNGL+C  I  D 
Sbjct: 64  IILSATTAEFHLKSCSITSLFNNPSTVSDDLNYPVKNKFRHDGIVGSCNGLLCFAIKGDC 123

Query: 227 LYLWNPSTREGKKLRLPDVEKKYR--CIDRYGLGYDDFSDDYKVVGVFVGMFDLVQKYQV 54
           + LWNPS R  KK   P +   +R  C   +GLGYD  +DDYKVV VF    +   + +V
Sbjct: 124 VLLWNPSIRVSKK--SPPLGNNWRPGCFTCFGLGYDHVNDDYKVVAVFCDPNEFFSESKV 181

Query: 53  WIYSVKAGSWRRIRDFP 3
            +YS+   +WR+I DFP
Sbjct: 182 KVYSMATNTWRKIHDFP 198



 Score = 85.9 bits (211), Expect = 2e-14
 Identities = 59/170 (34%), Positives = 90/170 (52%), Gaps = 5/170 (2%)
 Frame = -3

Query: 1212 EGNDGVYANGALHWVAKRHRTPRVRCPSH--IISLDLRDETYREVALPTYGDGKF-TFSV 1042
            + + G + +G L+W +       +   S   I+SLDL  ETYREV  P Y   +  T S+
Sbjct: 205  QNSSGKFVSGTLNWASNYS----IGSSSFWTIVSLDLEKETYREVLPPDYEKEECSTPSL 260

Query: 1041 GALGGSLIVRCACGSRVD--LWLMKEYSVAKSWTKMVSIPYLMSPMKYICSMPLCILKNG 868
              L G L +      + D  +WLMK+Y V +SW K+++IPYL +P  +  S P CI +NG
Sbjct: 261  SVLKGCLCMNYDY-KKTDFVVWLMKDYGVRESWIKLLTIPYLPNPEDFSYSGPYCISENG 319

Query: 867  AILFKSEKCTVLYNSKDNTLKDCEINNFRMNYRHLLVDTYVESLVSPKTD 718
             +L   E   +LY+ +D++ +   I   +  +     + YVESLVSP  D
Sbjct: 320  EVLLMFEFDLILYDPRDHSFRYPRIEGGKGWFD---AEVYVESLVSPMKD 366


>ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 405

 Score =  154 bits (390), Expect = 3e-35
 Identities = 87/199 (43%), Positives = 119/199 (59%), Gaps = 4/199 (2%)
 Frame = -1

Query: 587 DSTPLPYLPIGIITKILERLPVKSLLRFRSVCKSWRFLISSPKFVKTHMGLCTKNTEF-- 414
           +S PLP+LP  ++ +IL RLPVKSLL+FR VCKSW  LI  P F+K H+ L +++T F  
Sbjct: 42  ESLPLPFLPDELVVEILSRLPVKSLLQFRCVCKSWMSLIYDPYFMKKHLHLSSRSTHFTH 101

Query: 413 HQLILSYDISGFELKRCPLYSVPNEPHAVELPHLFGIPSPRATFCIEGSCNGLVCITIDV 234
           H++ILS   + F LK C L S+ N    V     + + +      I GSCNGL+C  I  
Sbjct: 102 HRIILSATTAEFHLKSCSLSSLFNNLSTVCDELNYPVKNKFRHDGIVGSCNGLLCFAIKG 161

Query: 233 DNLYLWNPSTREGKKLRLPDVEKKYR--CIDRYGLGYDDFSDDYKVVGVFVGMFDLVQKY 60
           D + LWNPS R  KK   P +   +R  C   +GLGYD  ++DYKVV VF    +   + 
Sbjct: 162 DCVLLWNPSIRVSKK--SPPLGNNWRPGCFTAFGLGYDHVNEDYKVVAVFCDPSEYFIEC 219

Query: 59  QVWIYSVKAGSWRRIRDFP 3
           +V +YS+   SWR+I+DFP
Sbjct: 220 KVKVYSMATNSWRKIQDFP 238



 Score = 87.4 bits (215), Expect = 7e-15
 Identities = 58/162 (35%), Positives = 85/162 (52%), Gaps = 2/162 (1%)
 Frame = -3

Query: 1206 NDGVYANGALHWVAKRHRTPRVRCPSHIISLDLRDETYREVALPTYG-DGKFTFSVGALG 1030
            N G + +G L+W A             I+SLDL  ETYREV  P Y  +   T  +G L 
Sbjct: 246  NSGKFVSGTLNWAANHSIGSSSLWV--IVSLDLHKETYREVLPPDYEKEDCSTPGLGVLQ 303

Query: 1029 GSLIVRCACG-SRVDLWLMKEYSVAKSWTKMVSIPYLMSPMKYICSMPLCILKNGAILFK 853
            G L +      +   +W+MK+Y   +SW K+VSIPY+ +P  +  S P  I +NG +L  
Sbjct: 304  GCLCMNYDYKKTHFVVWMMKDYGARESWVKLVSIPYVPNPENFSYSGPYYISENGEVLLM 363

Query: 852  SEKCTVLYNSKDNTLKDCEINNFRMNYRHLLVDTYVESLVSP 727
             E   +LYN +DN+ K  +I + +  +     + YVE+LVSP
Sbjct: 364  FEFDLILYNPRDNSFKYPKIESGKGWFD---AEVYVETLVSP 402


>emb|CAN70931.1| hypothetical protein VITISV_034638 [Vitis vinifera]
          Length = 265

 Score =  132 bits (331), Expect = 2e-28
 Identities = 74/195 (37%), Positives = 111/195 (56%), Gaps = 4/195 (2%)
 Frame = -1

Query: 575 LPYLPIGIITKILERLPVKSLLRFRSVCKSWRFLISSPKFVKTHMGLCTKNT-EFHQLIL 399
           +P+LP  II +IL  LPVKSL+RF+ VCKSWR +IS P+F K  + + TK + +  +L L
Sbjct: 1   MPHLPNEIILEILSLLPVKSLMRFKCVCKSWRLMISDPEFAKKQLNVATKESGKLDKLRL 60

Query: 398 SYDISGFELKRCPLYSVPNEPHAVELPHLFGIPSPRATFCIEGSCNGLVCITI---DVDN 228
                   +K C L S+  EP    + H +          I G  NGLVCI+I   + D 
Sbjct: 61  ILHSPYLRIKSCSLPSLFYEPFGYSINHDYPGRDLGVINEIVGCYNGLVCISIRDMEKDT 120

Query: 227 LYLWNPSTREGKKLRLPDVEKKYRCIDRYGLGYDDFSDDYKVVGVFVGMFDLVQKYQVWI 48
           +++WNPS +E K+L     E+ +  +  Y  GYD  +DDYKVV +     +   +Y V +
Sbjct: 121 IFVWNPSIKESKRLPSKPFEQLFYLVS-YAFGYDSITDDYKVVRLVCCSINDSYEYHVEV 179

Query: 47  YSVKAGSWRRIRDFP 3
           +S+++ +WR+IR FP
Sbjct: 180 FSLRSNAWRKIRSFP 194


>ref|XP_002312730.1| predicted protein [Populus trichocarpa] gi|222852550|gb|EEE90097.1|
           predicted protein [Populus trichocarpa]
          Length = 445

 Score =  124 bits (312), Expect = 4e-26
 Identities = 83/205 (40%), Positives = 118/205 (57%), Gaps = 14/205 (6%)
 Frame = -1

Query: 578 PLPYLPIGIITKILERLPVKSLLRFRSVCKSWRFLISSPKFVKTHM----GLCTKNTEFH 411
           PLP LP  +I +IL RLP KSL++FR V KS++ LIS+P+F+KTH+     L   + +F 
Sbjct: 75  PLPNLPHELIIEILSRLPAKSLIKFRCVSKSFKSLISNPQFIKTHLEKVKNLSRNDPDFS 134

Query: 410 -QLILSYDISGFELKRCPLYSVPNEP--HAVELPHLFGIPSPRATFCIEGSCNGLVCITI 240
            ++++S     F LK C LYSV N P   AV + +       R  + + GSC+GLVC+ I
Sbjct: 135 PEIVISSSEPLFRLKSCSLYSVYNNPVTDAVVIDYYLLKDIYRYDWVV-GSCDGLVCLGI 193

Query: 239 DVDNLYLWNPSTREGKKLRLPDV--EKKYRCIDRYGLGYDDFSDDYKVVGVFVGMFDLV- 69
             D + LWNPSTR     RLPD+   KK      +G GYD   DDYKV+ +F  +   V 
Sbjct: 194 KQDFVVLWNPSTRVFN--RLPDLGFAKKLGSYTVFGFGYDSQIDDYKVLAMFCFLTKSVY 251

Query: 68  --QKY--QVWIYSVKAGSWRRIRDF 6
              +Y  ++ + ++K   WRR+ DF
Sbjct: 252 GGSRYVTRIKVCALKGECWRRLEDF 276



 Score = 94.4 bits (233), Expect = 5e-17
 Identities = 53/137 (38%), Positives = 75/137 (54%), Gaps = 1/137 (0%)
 Frame = -3

Query: 1125 IISLDLRDETYREVALPTYGDGKFTFSVGALGGSLIVRCAC-GSRVDLWLMKEYSVAKSW 949
            I++ DL  E + EV  P YG   +   +G L G L V C   G R D+W++KE+ V  SW
Sbjct: 309  IVAFDLAQEMFEEVVQPDYGAVGYERVLGVLQGWLCVMCNYQGVRADVWVLKEFGVRDSW 368

Query: 948  TKMVSIPYLMSPMKYICSMPLCILKNGAILFKSEKCTVLYNSKDNTLKDCEINNFRMNYR 769
            TK+ SIPYL  P+ +  S+PLCI   G +L + +   V+YN K  T +   +N       
Sbjct: 369  TKLFSIPYLDDPLWFHYSVPLCIDVGGEVLLEYKSVLVIYNPKHGTFRYPVMNGAS---S 425

Query: 768  HLLVDTYVESLVSPKTD 718
             +  D Y++SLVSP  D
Sbjct: 426  CIEADVYIQSLVSPVVD 442


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