BLASTX nr result

ID: Panax21_contig00014940 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014940
         (1239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35349.3| unnamed protein product [Vitis vinifera]              456   e-126
ref|XP_002513152.1| WD-repeat protein, putative [Ricinus communi...   456   e-126
ref|XP_002270103.1| PREDICTED: WD repeat-containing protein 26 [...   456   e-126
ref|XP_002302127.1| predicted protein [Populus trichocarpa] gi|2...   434   e-119
ref|XP_002306758.1| predicted protein [Populus trichocarpa] gi|2...   426   e-117

>emb|CBI35349.3| unnamed protein product [Vitis vinifera]
          Length = 541

 Score =  456 bits (1173), Expect = e-126
 Identities = 205/282 (72%), Positives = 242/282 (85%)
 Frame = +2

Query: 2    AVIWEVKEDGQVILKHTLSGHQKPVLTISWNSDDSQLLTCGMEEAIRRWDVNSGECLHVY 181
            A+IWEVK+DG+V LKH L+GHQ+ V  +SW+ DD QLLTCG+EE+IRRWDVNSGECLH+Y
Sbjct: 255  AIIWEVKDDGEVSLKHKLTGHQREVSIVSWSPDDQQLLTCGVEESIRRWDVNSGECLHIY 314

Query: 182  QKAGVGLISCGWLADGEGMVSGMTDKSICLWDLDGKEVECWKGQRTIKISDMAVTDDGKR 361
            +KAGVGLISCGW   G+G+ SGMTDKSICLWDLDG+E+ECWKGQRT+KISD+A+TDDGKR
Sbjct: 315  EKAGVGLISCGWFPGGKGVFSGMTDKSICLWDLDGRELECWKGQRTLKISDIAITDDGKR 374

Query: 362  IISICRQNTILLLDRDSKCERLIEEKQTITSFSLSKDNKFLLVNLVNQELHLWSIAGDLK 541
            II++CR+N ILLLDR++KCERLI E Q ITSFSLSKDNKFLLVNL+NQE+HLW + GD  
Sbjct: 375  IITMCRENAILLLDREAKCERLIRENQMITSFSLSKDNKFLLVNLLNQEIHLWRLGGDPD 434

Query: 542  IVSKFKGHRRTRFLIRSCFGGFEQVFIASGSEDSQVYIWHRSTGDLLATLPGHSGTVNCV 721
            +VS+++GH+RTRFLIRSCFGG EQ FIASGSEDS+VY+WHR T + L  LPGHSG VNCV
Sbjct: 435  VVSRYRGHKRTRFLIRSCFGGLEQAFIASGSEDSKVYVWHRDTPEPLFALPGHSGAVNCV 494

Query: 722  SWHPNNPHMLASASDDRTIRIWGLDELKCKGTTHANGSIVHH 847
            SW P NPHMLAS SDD TIRIWGLD++K K   +    I HH
Sbjct: 495  SWSPTNPHMLASGSDDYTIRIWGLDQVKLKNRDNQRNGINHH 536


>ref|XP_002513152.1| WD-repeat protein, putative [Ricinus communis]
            gi|223548163|gb|EEF49655.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 578

 Score =  456 bits (1173), Expect = e-126
 Identities = 205/279 (73%), Positives = 245/279 (87%)
 Frame = +2

Query: 2    AVIWEVKEDGQVILKHTLSGHQKPVLTISWNSDDSQLLTCGMEEAIRRWDVNSGECLHVY 181
            A+IWE+KEDG V LKHTL GH+KPVLT+SW+ DDSQLLTCG EE IRRWDV+SGEC+H++
Sbjct: 293  AIIWEIKEDGIVALKHTLKGHRKPVLTVSWSPDDSQLLTCGQEEVIRRWDVSSGECIHIH 352

Query: 182  QKAGVGLISCGWLADGEGMVSGMTDKSICLWDLDGKEVECWKGQRTIKISDMAVTDDGKR 361
            +K+GVGL+SCGW  DG G+ +GMTD+SICLWDLDGKE+ECWK Q+T++ISDMA+TDDGK+
Sbjct: 353  EKSGVGLVSCGWFPDGRGIFAGMTDRSICLWDLDGKELECWKEQKTLRISDMAITDDGKK 412

Query: 362  IISICRQNTILLLDRDSKCERLIEEKQTITSFSLSKDNKFLLVNLVNQELHLWSIAGDLK 541
            IIS+C++N+ILLLDR++K E LIEE++TITSFSLSKDNKFLLVNL+NQELHLW+I G  K
Sbjct: 413  IISMCKENSILLLDREAKFESLIEEEETITSFSLSKDNKFLLVNLINQELHLWNIEGSPK 472

Query: 542  IVSKFKGHRRTRFLIRSCFGGFEQVFIASGSEDSQVYIWHRSTGDLLATLPGHSGTVNCV 721
            IVS +KGH RTRF+IRSCFGGFEQ FIASGSEDSQVYIWHR +G+LL  LPGHSG VNCV
Sbjct: 473  IVSTYKGHTRTRFIIRSCFGGFEQAFIASGSEDSQVYIWHRGSGELLLALPGHSGAVNCV 532

Query: 722  SWHPNNPHMLASASDDRTIRIWGLDELKCKGTTHANGSI 838
            SW+P N HMLAS SDDRTIRIWGL+    K    +NG++
Sbjct: 533  SWNPENLHMLASGSDDRTIRIWGLNHYSLKQREQSNGTV 571


>ref|XP_002270103.1| PREDICTED: WD repeat-containing protein 26 [Vitis vinifera]
          Length = 586

 Score =  456 bits (1173), Expect = e-126
 Identities = 205/282 (72%), Positives = 242/282 (85%)
 Frame = +2

Query: 2    AVIWEVKEDGQVILKHTLSGHQKPVLTISWNSDDSQLLTCGMEEAIRRWDVNSGECLHVY 181
            A+IWEVK+DG+V LKH L+GHQ+ V  +SW+ DD QLLTCG+EE+IRRWDVNSGECLH+Y
Sbjct: 300  AIIWEVKDDGEVSLKHKLTGHQREVSIVSWSPDDQQLLTCGVEESIRRWDVNSGECLHIY 359

Query: 182  QKAGVGLISCGWLADGEGMVSGMTDKSICLWDLDGKEVECWKGQRTIKISDMAVTDDGKR 361
            +KAGVGLISCGW   G+G+ SGMTDKSICLWDLDG+E+ECWKGQRT+KISD+A+TDDGKR
Sbjct: 360  EKAGVGLISCGWFPGGKGVFSGMTDKSICLWDLDGRELECWKGQRTLKISDIAITDDGKR 419

Query: 362  IISICRQNTILLLDRDSKCERLIEEKQTITSFSLSKDNKFLLVNLVNQELHLWSIAGDLK 541
            II++CR+N ILLLDR++KCERLI E Q ITSFSLSKDNKFLLVNL+NQE+HLW + GD  
Sbjct: 420  IITMCRENAILLLDREAKCERLIRENQMITSFSLSKDNKFLLVNLLNQEIHLWRLGGDPD 479

Query: 542  IVSKFKGHRRTRFLIRSCFGGFEQVFIASGSEDSQVYIWHRSTGDLLATLPGHSGTVNCV 721
            +VS+++GH+RTRFLIRSCFGG EQ FIASGSEDS+VY+WHR T + L  LPGHSG VNCV
Sbjct: 480  VVSRYRGHKRTRFLIRSCFGGLEQAFIASGSEDSKVYVWHRDTPEPLFALPGHSGAVNCV 539

Query: 722  SWHPNNPHMLASASDDRTIRIWGLDELKCKGTTHANGSIVHH 847
            SW P NPHMLAS SDD TIRIWGLD++K K   +    I HH
Sbjct: 540  SWSPTNPHMLASGSDDYTIRIWGLDQVKLKNRDNQRNGINHH 581


>ref|XP_002302127.1| predicted protein [Populus trichocarpa] gi|222843853|gb|EEE81400.1|
            predicted protein [Populus trichocarpa]
          Length = 580

 Score =  434 bits (1117), Expect = e-119
 Identities = 196/279 (70%), Positives = 241/279 (86%), Gaps = 1/279 (0%)
 Frame = +2

Query: 2    AVIWEVKEDGQVILKHTLSGHQKPVLTISWNSDDSQLLTCGMEEAIRRWDVNSGECLHVY 181
            A+IWE+  +G V LKH LSGHQKPV ++SW+ DD QLLTCG+EE +RRWDV+SGECL VY
Sbjct: 295  AIIWEIDVNGGVSLKHRLSGHQKPVSSVSWSPDDHQLLTCGVEEVVRRWDVSSGECLQVY 354

Query: 182  QKAGVGLISCGWLADGEGMVSGMTDKSICLWDLDGKEVECWKGQRTIKISDMAVTDDGKR 361
            +K G+GL+SCGW  DG+ + SG+ DKSIC+W+LDGKEVECWKGQ+T+KISD+ +T DGK+
Sbjct: 355  EKVGLGLVSCGWFPDGKWIFSGINDKSICMWELDGKEVECWKGQKTLKISDLEITSDGKQ 414

Query: 362  IISICRQNTILLLDRDSKCERLIEEKQTITSFSLSKDNKFLLVNLVNQELHLWSIAGDLK 541
            IIS+CR   ILLLDR++K ER+IEE QTITSFSLS+DN+FLLVNL+NQE+HLWSI G+++
Sbjct: 415  IISMCRPTAILLLDREAKAERVIEEDQTITSFSLSRDNRFLLVNLLNQEIHLWSIDGNIR 474

Query: 542  IVSKFKGHRRTRFLIRSCFGGFEQVFIASGSEDSQVYIWHRSTGDLLATLPGHSGTVNCV 721
            +V+K+KGHRRTRF+IRSCFGG EQ FIA GSEDSQVYIWHR +GDL+  LPGHSG VNCV
Sbjct: 475  LVAKYKGHRRTRFVIRSCFGGLEQAFIACGSEDSQVYIWHRGSGDLVEALPGHSGAVNCV 534

Query: 722  SWHPNNPHMLASASDDRTIRIWGLDELKCK-GTTHANGS 835
            SW+P NP+MLASASDDRTIRIWGL+ L  K  + H+NG+
Sbjct: 535  SWNPANPYMLASASDDRTIRIWGLNSLHVKHKSAHSNGT 573


>ref|XP_002306758.1| predicted protein [Populus trichocarpa] gi|222856207|gb|EEE93754.1|
            predicted protein [Populus trichocarpa]
          Length = 581

 Score =  426 bits (1096), Expect = e-117
 Identities = 190/278 (68%), Positives = 239/278 (85%), Gaps = 1/278 (0%)
 Frame = +2

Query: 2    AVIWEVKEDGQVILKHTLSGHQKPVLTISWNSDDSQLLTCGMEEAIRRWDVNSGECLHVY 181
            A+IWE+  +G V LKH LSGHQKPV ++SW+ DD QLLTCG+EE +RRWDV+SGECL VY
Sbjct: 296  AIIWEIDVNGGVSLKHRLSGHQKPVSSVSWSPDDHQLLTCGVEEVVRRWDVSSGECLQVY 355

Query: 182  QKAGVGLISCGWLADGEGMVSGMTDKSICLWDLDGKEVECWKGQRTIKISDMAVTDDGKR 361
            +K G+GL+SCGW  DG+ + SG+ DKSIC+W+LDGKEVECWKGQRT+KISD+ +T DGK+
Sbjct: 356  EKVGLGLVSCGWFPDGKWIFSGINDKSICMWELDGKEVECWKGQRTLKISDLEITSDGKQ 415

Query: 362  IISICRQNTILLLDRDSKCERLIEEKQTITSFSLSKDNKFLLVNLVNQELHLWSIAGDLK 541
            IIS+CR   +LLLDR++K ER+IEE Q ITSFSLS+DN+FLLVNL+NQE+HLW+I GD++
Sbjct: 416  IISMCRGTALLLLDREAKVERVIEEDQAITSFSLSRDNRFLLVNLLNQEIHLWNIDGDIR 475

Query: 542  IVSKFKGHRRTRFLIRSCFGGFEQVFIASGSEDSQVYIWHRSTGDLLATLPGHSGTVNCV 721
            +V+ +KGH+RTRF+IRSCFGG EQ FIASGSEDSQ+Y+WHR++ +L+  LPGHSG VNCV
Sbjct: 476  LVATYKGHKRTRFVIRSCFGGHEQAFIASGSEDSQIYLWHRASRELVEALPGHSGAVNCV 535

Query: 722  SWHPNNPHMLASASDDRTIRIWGLDELKCK-GTTHANG 832
            SW+P NPHMLASASDDRTIRIWG++ L+ K  + H NG
Sbjct: 536  SWNPANPHMLASASDDRTIRIWGVNALQVKHKSAHCNG 573


Top