BLASTX nr result

ID: Panax21_contig00014911 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014911
         (653 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282248.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...   212   4e-53
gb|AEB69786.1| MAKIBISHI 1 [Medicago truncatula]                      209   5e-52
gb|AFK42054.1| unknown [Lotus japonicus]                              204   2e-50
emb|CBI20320.3| unnamed protein product [Vitis vinifera]              200   2e-49
ref|XP_004172618.1| PREDICTED: E3 ubiquitin-protein ligase RMA3-...   198   6e-49

>ref|XP_002282248.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Vitis vinifera]
          Length = 253

 Score =  212 bits (540), Expect = 4e-53
 Identities = 116/218 (53%), Positives = 143/218 (65%), Gaps = 12/218 (5%)
 Frame = -2

Query: 652 QKWKSVPSPTTALENSSGCFDCNICLESANDPVVTLCGHLYCRPCIYKWLNVQSSSPEPG 473
           +KWK++ +   A ENS+G FDCNICL+SA+DPVVTLCGHLYC PCIYKWL+VQS+SP   
Sbjct: 24  KKWKAISASEAASENSNGSFDCNICLDSAHDPVVTLCGHLYCWPCIYKWLHVQSTSPVTE 83

Query: 472 AQPNCPVCKAIISKSSLVPLYGQGTCQSESNAKSPQLNLNIPHRPSALGVNTL----SHQ 305
            Q NCPVCKA IS +SLVPLYG+G   SES  K   +   IP RP A GV+TL    +  
Sbjct: 84  QQQNCPVCKANISHTSLVPLYGRGPSPSESETKKLHVGPAIPRRPPAHGVHTLITTTTSA 143

Query: 304 QLN--PYXXXXXXXXXXXXXXXPHPVG----TPNFVATAMTSPTVGMFGEMVYASIFGSS 143
            LN  P                PHP G    TP    T++ +PT+GMFGEMV++ +FGSS
Sbjct: 144 SLNSHPSRHLHPNPFQSHSQYFPHPYGGYAATPTL--TSVLNPTIGMFGEMVFSRMFGSS 201

Query: 142 DTRLLS--PPPQYPLMRNGGPRVRRQELQVDKSLNRVS 35
           DT L +   P  YPLM +  PR+RRQE+Q+D+ LNRVS
Sbjct: 202 DTSLFAYPYPNTYPLMASANPRMRRQEMQLDRCLNRVS 239


>gb|AEB69786.1| MAKIBISHI 1 [Medicago truncatula]
          Length = 250

 Score =  209 bits (531), Expect = 5e-52
 Identities = 112/225 (49%), Positives = 131/225 (58%), Gaps = 19/225 (8%)
 Frame = -2

Query: 652 QKWKSVPSPTTALENSSGCFDCNICLESANDPVVTLCGHLYCRPCIYKWLNVQSSSPEPG 473
           QKWKS    TT     + CFDCNICLESANDPVVTLCGHLYC PCIYKWLNVQSSS EP 
Sbjct: 16  QKWKSTTEDTTISSGENNCFDCNICLESANDPVVTLCGHLYCWPCIYKWLNVQSSSVEPD 75

Query: 472 AQPNCPVCKAIISKSSLVPLYGQGTCQSESNAKSPQLNLNIPHRPSALGVNTL------- 314
            QP CPVCKA+IS +SLVPLYG+G   SE+ +   Q+ L IPHRP    +N L       
Sbjct: 76  TQPTCPVCKAVISHTSLVPLYGRGKSNSETESNKLQVGLGIPHRPPPYNLNALLTSNRPS 135

Query: 313 ---SHQQLNPYXXXXXXXXXXXXXXXPHPVG---------TPNFVATAMTSPTVGMFGEM 170
                QQL+P                PH  G               T+  +P +G+FGEM
Sbjct: 136 NLRHEQQLHPNYFQSQSRPIHYQHYIPHLYGGHGANGLHYLGGAAMTSFVNPVMGLFGEM 195

Query: 169 VYASIFGSSDTRLLSPPPQYPLMRNGGPRVRRQELQVDKSLNRVS 35
           V   +FG SD  L +    YP   +  PR+RRQE+Q+DKSLNRVS
Sbjct: 196 VSTRMFGVSDANLFA----YPRNGSTSPRMRRQEMQIDKSLNRVS 236


>gb|AFK42054.1| unknown [Lotus japonicus]
          Length = 248

 Score =  204 bits (518), Expect = 2e-50
 Identities = 114/223 (51%), Positives = 135/223 (60%), Gaps = 17/223 (7%)
 Frame = -2

Query: 652 QKWKSVPSPTTALENSSGCFDCNICLESANDPVVTLCGHLYCRPCIYKWLNVQSSSPEPG 473
           QK KS  + +    + +GCFDCNICLESA+DPVVTLCGHLYC PCIYKWL+VQSSS EP 
Sbjct: 16  QKLKSTSAESPISSSDNGCFDCNICLESAHDPVVTLCGHLYCWPCIYKWLSVQSSSAEPD 75

Query: 472 AQPNCPVCKAIISKSSLVPLYGQGTCQSESNAKSPQLNLNIPHRPSALGVNTL--SHQQL 299
            Q  CP+CKA IS +SLVPLYG+GT  SES +K  Q+ L IP RP    +N +  S++  
Sbjct: 76  QQQTCPICKAEISHTSLVPLYGRGTSNSESESKKLQMGLGIPQRPPPYNLNAMLTSNRAS 135

Query: 298 NP------YXXXXXXXXXXXXXXXPHPVGT------PNFVATAMTS---PTVGMFGEMVY 164
           NP      Y                +  GT      P    TAMTS   P +GMFGEMV 
Sbjct: 136 NPHLGEQLYPSYFHSQSQPLHYQQHYLYGTHGANGLPYLGGTAMTSFFNPVIGMFGEMVL 195

Query: 163 ASIFGSSDTRLLSPPPQYPLMRNGGPRVRRQELQVDKSLNRVS 35
             IFG SD  L      YP   +G PR+RRQE+Q+DKSLNRVS
Sbjct: 196 TRIFGVSDANLF----PYPHSGSGSPRMRRQEMQIDKSLNRVS 234


>emb|CBI20320.3| unnamed protein product [Vitis vinifera]
          Length = 308

 Score =  200 bits (508), Expect = 2e-49
 Identities = 105/208 (50%), Positives = 130/208 (62%), Gaps = 2/208 (0%)
 Frame = -2

Query: 652 QKWKSVPSPTTALENSSGCFDCNICLESANDPVVTLCGHLYCRPCIYKWLNVQSSSPEPG 473
           +KWK++ +   A ENS+G FDCNICL+SA+DPVVTLCGHLYC PCIYKWL+VQS+SP   
Sbjct: 124 KKWKAISASEAASENSNGSFDCNICLDSAHDPVVTLCGHLYCWPCIYKWLHVQSTSPVTE 183

Query: 472 AQPNCPVCKAIISKSSLVPLYGQGTCQSESNAKSPQLNLNIPHRPSALGVNTLSHQQLNP 293
            Q NCPVCKA IS +SLVPLYG+G   SES  K   +   IP RP A GV+T        
Sbjct: 184 QQQNCPVCKANISHTSLVPLYGRGPSPSESETKKLHVGPAIPRRPPAHGVHT-------- 235

Query: 292 YXXXXXXXXXXXXXXXPHPVGTPNFVATAMTSPTVGMFGEMVYASIFGSSDTRLLS--PP 119
                                        + +PT+GMFGEMV++ +FGSSDT L +   P
Sbjct: 236 -----------------------------VLNPTIGMFGEMVFSRMFGSSDTSLFAYPYP 266

Query: 118 PQYPLMRNGGPRVRRQELQVDKSLNRVS 35
             YPLM +  PR+RRQE+Q+D+ LNRVS
Sbjct: 267 NTYPLMASANPRMRRQEMQLDRCLNRVS 294


>ref|XP_004172618.1| PREDICTED: E3 ubiquitin-protein ligase RMA3-like [Cucumis sativus]
          Length = 261

 Score =  198 bits (504), Expect = 6e-49
 Identities = 107/227 (47%), Positives = 133/227 (58%), Gaps = 21/227 (9%)
 Frame = -2

Query: 652 QKWKSVPSPTTALENSSGCFDCNICLESANDPVVTLCGHLYCRPCIYKWLNVQSSSPEPG 473
           Q WKS+ + +T  E+++GCFDCNICL+SA DPVVTLCGHLYC PCIYKWL+VQ SS EP 
Sbjct: 22  QNWKSISTQSTISEDANGCFDCNICLDSAADPVVTLCGHLYCWPCIYKWLHVQISSNEPE 81

Query: 472 AQPNCPVCKAIISKSSLVPLYGQGTCQSESNAKSPQLNLNIPHRPSALGVNTLSHQQLNP 293
              NCPVCKA I+ SSLVPLYG+GT  S+S +K   L + +P RP    +NT SH   + 
Sbjct: 82  NTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGMAVPRRPPP-SMNTPSHSNSSS 140

Query: 292 YXXXXXXXXXXXXXXXPHPV--------------------GTPNFVATAMTSPTVGMFGE 173
                            HP+                       N V T++ +PT+GMFGE
Sbjct: 141 ALYPSQELHSNYIRSPSHPIYHQQYFPQATYGNFASYSPSYLGNAVITSLLNPTIGMFGE 200

Query: 172 MVYASIFGSSDTRLLS-PPPQYPLMRNGGPRVRRQELQVDKSLNRVS 35
            V+  IFGS D  LL   P    +  N   R+RRQE+Q+DKSLNRVS
Sbjct: 201 TVFTRIFGSVDGNLLPYSPYNNSISGNASTRMRRQEMQLDKSLNRVS 247


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