BLASTX nr result

ID: Panax21_contig00014875 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014875
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17843.3| unnamed protein product [Vitis vinifera]              222   3e-56
ref|XP_002270335.1| PREDICTED: protein VERNALIZATION INSENSITIVE...   222   3e-56
gb|AFD98847.1| vernalization insensitive 3 [Solanum lycopersicum]     209   2e-52
ref|XP_002329653.1| predicted protein [Populus trichocarpa] gi|2...   207   7e-52
ref|XP_003549399.1| PREDICTED: protein VERNALIZATION INSENSITIVE...   206   2e-51

>emb|CBI17843.3| unnamed protein product [Vitis vinifera]
          Length = 652

 Score =  222 bits (565), Expect = 3e-56
 Identities = 100/132 (75%), Positives = 113/132 (85%), Gaps = 1/132 (0%)
 Frame = +2

Query: 11  SINPINNHLGNIVYCKNSACRAKLSRDV-FCKRCSCCICHQYDENKDPSLWLTCSSEPPF 187
           SI+  +  LGN +YCKN ACRA LSR+  FCKRCSCCICHQYD+NKDPSLWLTCSS+PPF
Sbjct: 97  SISNGDGDLGNAIYCKNLACRANLSREYEFCKRCSCCICHQYDDNKDPSLWLTCSSDPPF 156

Query: 188 QGESCGMSCHLECALKQEKSGIAKDKQDRGLDGCFYCLSCGKRNDLLGCWRKQMITARDT 367
           QG SCGMSCHLECA K EKSGIAKD +   LDG FYC+SCGK ND+LGCWRKQ++ A++T
Sbjct: 157 QGVSCGMSCHLECAFKHEKSGIAKDGRHVRLDGSFYCVSCGKVNDMLGCWRKQLMMAKET 216

Query: 368 RRVDILCYRVSL 403
           RRVDILCYRVSL
Sbjct: 217 RRVDILCYRVSL 228


>ref|XP_002270335.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Vitis
           vinifera]
          Length = 738

 Score =  222 bits (565), Expect = 3e-56
 Identities = 100/132 (75%), Positives = 113/132 (85%), Gaps = 1/132 (0%)
 Frame = +2

Query: 11  SINPINNHLGNIVYCKNSACRAKLSRDV-FCKRCSCCICHQYDENKDPSLWLTCSSEPPF 187
           SI+  +  LGN +YCKN ACRA LSR+  FCKRCSCCICHQYD+NKDPSLWLTCSS+PPF
Sbjct: 130 SISNGDGDLGNAIYCKNLACRANLSREYEFCKRCSCCICHQYDDNKDPSLWLTCSSDPPF 189

Query: 188 QGESCGMSCHLECALKQEKSGIAKDKQDRGLDGCFYCLSCGKRNDLLGCWRKQMITARDT 367
           QG SCGMSCHLECA K EKSGIAKD +   LDG FYC+SCGK ND+LGCWRKQ++ A++T
Sbjct: 190 QGVSCGMSCHLECAFKHEKSGIAKDGRHVRLDGSFYCVSCGKVNDMLGCWRKQLMMAKET 249

Query: 368 RRVDILCYRVSL 403
           RRVDILCYRVSL
Sbjct: 250 RRVDILCYRVSL 261


>gb|AFD98847.1| vernalization insensitive 3 [Solanum lycopersicum]
          Length = 739

 Score =  209 bits (532), Expect = 2e-52
 Identities = 96/134 (71%), Positives = 108/134 (80%), Gaps = 1/134 (0%)
 Frame = +2

Query: 5   SSSINPINNHLGNIVYCKNSACRAKLS-RDVFCKRCSCCICHQYDENKDPSLWLTCSSEP 181
           +SS    N  L N+VYCKN ACRAKLS +D FCKRCSCCIC  YD+NKDPSLWL CSSEP
Sbjct: 125 TSSTTNTNVSLANVVYCKNLACRAKLSGQDAFCKRCSCCICRNYDDNKDPSLWLICSSEP 184

Query: 182 PFQGESCGMSCHLECALKQEKSGIAKDKQDRGLDGCFYCLSCGKRNDLLGCWRKQMITAR 361
           PFQG+SCGMSCHLECA+K  KS I  DK D+G +G FYC+SCGK NDLL   +KQ+I AR
Sbjct: 185 PFQGDSCGMSCHLECAMKHGKSCITTDKSDKGNNGTFYCVSCGKANDLLSSLKKQLIVAR 244

Query: 362 DTRRVDILCYRVSL 403
           DTRRVDILCYR+SL
Sbjct: 245 DTRRVDILCYRLSL 258


>ref|XP_002329653.1| predicted protein [Populus trichocarpa] gi|222870534|gb|EEF07665.1|
           predicted protein [Populus trichocarpa]
          Length = 679

 Score =  207 bits (527), Expect = 7e-52
 Identities = 94/123 (76%), Positives = 102/123 (82%), Gaps = 1/123 (0%)
 Frame = +2

Query: 38  GNIVYCKNSACRAKLS-RDVFCKRCSCCICHQYDENKDPSLWLTCSSEPPFQGESCGMSC 214
           GN VYCKNSACRA L   D FCKRCSCCIC QYD+NKDPSLWL CSSEPPFQG +C MSC
Sbjct: 117 GNTVYCKNSACRATLRPADTFCKRCSCCICRQYDDNKDPSLWLICSSEPPFQGVACSMSC 176

Query: 215 HLECALKQEKSGIAKDKQDRGLDGCFYCLSCGKRNDLLGCWRKQMITARDTRRVDILCYR 394
           HL+CALKQE SGI K+ +   LDG F C SCGK NDLLGCWRKQ++ A+DTRRVDILCYR
Sbjct: 177 HLDCALKQESSGIGKNGRHGRLDGSFCCFSCGKVNDLLGCWRKQLMMAKDTRRVDILCYR 236

Query: 395 VSL 403
           VSL
Sbjct: 237 VSL 239


>ref|XP_003549399.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Glycine max]
          Length = 737

 Score =  206 bits (524), Expect = 2e-51
 Identities = 97/137 (70%), Positives = 111/137 (81%), Gaps = 3/137 (2%)
 Frame = +2

Query: 2   PSSSINPINN--HLGNIVYCKNSACRAKLSRD-VFCKRCSCCICHQYDENKDPSLWLTCS 172
           P++SI  +NN     N  YCKNSAC+A L++   FCKRCSCCICHQYD+NKDPSLWL CS
Sbjct: 123 PATSIT-VNNGGDSVNTAYCKNSACKATLNQSYAFCKRCSCCICHQYDDNKDPSLWLICS 181

Query: 173 SEPPFQGESCGMSCHLECALKQEKSGIAKDKQDRGLDGCFYCLSCGKRNDLLGCWRKQMI 352
           SE PF G SCG+SCHLECALK + SGIAKD +   LDG FYC+SCGK NDLLGCWRKQ++
Sbjct: 182 SENPFPGVSCGLSCHLECALKHDGSGIAKDGEHPKLDGGFYCVSCGKVNDLLGCWRKQLM 241

Query: 353 TARDTRRVDILCYRVSL 403
            A+DTRRVDILCYRVSL
Sbjct: 242 VAKDTRRVDILCYRVSL 258