BLASTX nr result
ID: Panax21_contig00014875
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00014875 (404 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI17843.3| unnamed protein product [Vitis vinifera] 222 3e-56 ref|XP_002270335.1| PREDICTED: protein VERNALIZATION INSENSITIVE... 222 3e-56 gb|AFD98847.1| vernalization insensitive 3 [Solanum lycopersicum] 209 2e-52 ref|XP_002329653.1| predicted protein [Populus trichocarpa] gi|2... 207 7e-52 ref|XP_003549399.1| PREDICTED: protein VERNALIZATION INSENSITIVE... 206 2e-51 >emb|CBI17843.3| unnamed protein product [Vitis vinifera] Length = 652 Score = 222 bits (565), Expect = 3e-56 Identities = 100/132 (75%), Positives = 113/132 (85%), Gaps = 1/132 (0%) Frame = +2 Query: 11 SINPINNHLGNIVYCKNSACRAKLSRDV-FCKRCSCCICHQYDENKDPSLWLTCSSEPPF 187 SI+ + LGN +YCKN ACRA LSR+ FCKRCSCCICHQYD+NKDPSLWLTCSS+PPF Sbjct: 97 SISNGDGDLGNAIYCKNLACRANLSREYEFCKRCSCCICHQYDDNKDPSLWLTCSSDPPF 156 Query: 188 QGESCGMSCHLECALKQEKSGIAKDKQDRGLDGCFYCLSCGKRNDLLGCWRKQMITARDT 367 QG SCGMSCHLECA K EKSGIAKD + LDG FYC+SCGK ND+LGCWRKQ++ A++T Sbjct: 157 QGVSCGMSCHLECAFKHEKSGIAKDGRHVRLDGSFYCVSCGKVNDMLGCWRKQLMMAKET 216 Query: 368 RRVDILCYRVSL 403 RRVDILCYRVSL Sbjct: 217 RRVDILCYRVSL 228 >ref|XP_002270335.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Vitis vinifera] Length = 738 Score = 222 bits (565), Expect = 3e-56 Identities = 100/132 (75%), Positives = 113/132 (85%), Gaps = 1/132 (0%) Frame = +2 Query: 11 SINPINNHLGNIVYCKNSACRAKLSRDV-FCKRCSCCICHQYDENKDPSLWLTCSSEPPF 187 SI+ + LGN +YCKN ACRA LSR+ FCKRCSCCICHQYD+NKDPSLWLTCSS+PPF Sbjct: 130 SISNGDGDLGNAIYCKNLACRANLSREYEFCKRCSCCICHQYDDNKDPSLWLTCSSDPPF 189 Query: 188 QGESCGMSCHLECALKQEKSGIAKDKQDRGLDGCFYCLSCGKRNDLLGCWRKQMITARDT 367 QG SCGMSCHLECA K EKSGIAKD + LDG FYC+SCGK ND+LGCWRKQ++ A++T Sbjct: 190 QGVSCGMSCHLECAFKHEKSGIAKDGRHVRLDGSFYCVSCGKVNDMLGCWRKQLMMAKET 249 Query: 368 RRVDILCYRVSL 403 RRVDILCYRVSL Sbjct: 250 RRVDILCYRVSL 261 >gb|AFD98847.1| vernalization insensitive 3 [Solanum lycopersicum] Length = 739 Score = 209 bits (532), Expect = 2e-52 Identities = 96/134 (71%), Positives = 108/134 (80%), Gaps = 1/134 (0%) Frame = +2 Query: 5 SSSINPINNHLGNIVYCKNSACRAKLS-RDVFCKRCSCCICHQYDENKDPSLWLTCSSEP 181 +SS N L N+VYCKN ACRAKLS +D FCKRCSCCIC YD+NKDPSLWL CSSEP Sbjct: 125 TSSTTNTNVSLANVVYCKNLACRAKLSGQDAFCKRCSCCICRNYDDNKDPSLWLICSSEP 184 Query: 182 PFQGESCGMSCHLECALKQEKSGIAKDKQDRGLDGCFYCLSCGKRNDLLGCWRKQMITAR 361 PFQG+SCGMSCHLECA+K KS I DK D+G +G FYC+SCGK NDLL +KQ+I AR Sbjct: 185 PFQGDSCGMSCHLECAMKHGKSCITTDKSDKGNNGTFYCVSCGKANDLLSSLKKQLIVAR 244 Query: 362 DTRRVDILCYRVSL 403 DTRRVDILCYR+SL Sbjct: 245 DTRRVDILCYRLSL 258 >ref|XP_002329653.1| predicted protein [Populus trichocarpa] gi|222870534|gb|EEF07665.1| predicted protein [Populus trichocarpa] Length = 679 Score = 207 bits (527), Expect = 7e-52 Identities = 94/123 (76%), Positives = 102/123 (82%), Gaps = 1/123 (0%) Frame = +2 Query: 38 GNIVYCKNSACRAKLS-RDVFCKRCSCCICHQYDENKDPSLWLTCSSEPPFQGESCGMSC 214 GN VYCKNSACRA L D FCKRCSCCIC QYD+NKDPSLWL CSSEPPFQG +C MSC Sbjct: 117 GNTVYCKNSACRATLRPADTFCKRCSCCICRQYDDNKDPSLWLICSSEPPFQGVACSMSC 176 Query: 215 HLECALKQEKSGIAKDKQDRGLDGCFYCLSCGKRNDLLGCWRKQMITARDTRRVDILCYR 394 HL+CALKQE SGI K+ + LDG F C SCGK NDLLGCWRKQ++ A+DTRRVDILCYR Sbjct: 177 HLDCALKQESSGIGKNGRHGRLDGSFCCFSCGKVNDLLGCWRKQLMMAKDTRRVDILCYR 236 Query: 395 VSL 403 VSL Sbjct: 237 VSL 239 >ref|XP_003549399.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Glycine max] Length = 737 Score = 206 bits (524), Expect = 2e-51 Identities = 97/137 (70%), Positives = 111/137 (81%), Gaps = 3/137 (2%) Frame = +2 Query: 2 PSSSINPINN--HLGNIVYCKNSACRAKLSRD-VFCKRCSCCICHQYDENKDPSLWLTCS 172 P++SI +NN N YCKNSAC+A L++ FCKRCSCCICHQYD+NKDPSLWL CS Sbjct: 123 PATSIT-VNNGGDSVNTAYCKNSACKATLNQSYAFCKRCSCCICHQYDDNKDPSLWLICS 181 Query: 173 SEPPFQGESCGMSCHLECALKQEKSGIAKDKQDRGLDGCFYCLSCGKRNDLLGCWRKQMI 352 SE PF G SCG+SCHLECALK + SGIAKD + LDG FYC+SCGK NDLLGCWRKQ++ Sbjct: 182 SENPFPGVSCGLSCHLECALKHDGSGIAKDGEHPKLDGGFYCVSCGKVNDLLGCWRKQLM 241 Query: 353 TARDTRRVDILCYRVSL 403 A+DTRRVDILCYRVSL Sbjct: 242 VAKDTRRVDILCYRVSL 258