BLASTX nr result

ID: Panax21_contig00014872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014872
         (568 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533502.1| conserved hypothetical protein [Ricinus comm...   100   2e-19
ref|XP_002313669.1| predicted protein [Populus trichocarpa] gi|2...   100   3e-19
ref|XP_002265575.1| PREDICTED: uncharacterized protein LOC100250...    98   8e-19
ref|XP_002305559.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
emb|CAN71484.1| hypothetical protein VITISV_025338 [Vitis vinifera]    96   3e-18

>ref|XP_002533502.1| conserved hypothetical protein [Ricinus communis]
           gi|223526646|gb|EEF28889.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 285

 Score =  100 bits (249), Expect = 2e-19
 Identities = 46/81 (56%), Positives = 61/81 (75%)
 Frame = -2

Query: 243 VIDLTYCFLLFLFAFRRTSQNRLRILPRVFVGRSENLKQIVKVMSDAARRSLKSRGLHIP 64
           +IDL +     +       + +++ LPRVFVG+SENLK+I+KVMSDAA+RSLK+R L +P
Sbjct: 168 IIDLDFASQFEIARPTNEYRKQVQSLPRVFVGKSENLKRIIKVMSDAAKRSLKTRDLSLP 227

Query: 63  PWRKNRFIQNKWFGPYRRTVN 1
           PWRKNR++QNKW GPY RT N
Sbjct: 228 PWRKNRYMQNKWLGPYHRTCN 248


>ref|XP_002313669.1| predicted protein [Populus trichocarpa] gi|222850077|gb|EEE87624.1|
           predicted protein [Populus trichocarpa]
          Length = 289

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 51/84 (60%), Positives = 63/84 (75%), Gaps = 3/84 (3%)
 Frame = -2

Query: 243 VIDLTYCFLLFLFAFRRTSQNRLRI---LPRVFVGRSENLKQIVKVMSDAARRSLKSRGL 73
           V+DL +      F   R +   L++   LPRVFVGRSE+LK IVK +SDA++RSLKSR L
Sbjct: 177 VVDLDFASQ---FEIARPTSQFLKLQHSLPRVFVGRSEDLKTIVKSISDASKRSLKSREL 233

Query: 72  HIPPWRKNRFIQNKWFGPYRRTVN 1
            +PPWRKNR++QNKWFGPYRRTVN
Sbjct: 234 SLPPWRKNRYMQNKWFGPYRRTVN 257


>ref|XP_002265575.1| PREDICTED: uncharacterized protein LOC100250319 [Vitis vinifera]
           gi|296090565|emb|CBI40915.3| unnamed protein product
           [Vitis vinifera]
          Length = 282

 Score = 98.2 bits (243), Expect = 8e-19
 Identities = 42/57 (73%), Positives = 53/57 (92%)
 Frame = -2

Query: 177 LRILPRVFVGRSENLKQIVKVMSDAARRSLKSRGLHIPPWRKNRFIQNKWFGPYRRT 7
           ++ LPRVF+G+SE+LK+IVK+  DAA+RSLKSRGLH+PPWRKNR++QNKWFGP RRT
Sbjct: 190 IQTLPRVFIGKSEDLKKIVKLTCDAAKRSLKSRGLHLPPWRKNRYMQNKWFGPCRRT 246


>ref|XP_002305559.1| predicted protein [Populus trichocarpa] gi|222848523|gb|EEE86070.1|
           predicted protein [Populus trichocarpa]
          Length = 289

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 48/68 (70%), Positives = 56/68 (82%), Gaps = 2/68 (2%)
 Frame = -2

Query: 198 RRTSQ--NRLRILPRVFVGRSENLKQIVKVMSDAARRSLKSRGLHIPPWRKNRFIQNKWF 25
           R TSQ    L  LPRVFVG+SE+LK IV+ +SDAA+RSLKSR L +PPWRKNR++QNKWF
Sbjct: 187 RPTSQYLKLLHHLPRVFVGKSEDLKTIVRSISDAAKRSLKSRELSLPPWRKNRYMQNKWF 246

Query: 24  GPYRRTVN 1
           GPY RTVN
Sbjct: 247 GPYLRTVN 254


>emb|CAN71484.1| hypothetical protein VITISV_025338 [Vitis vinifera]
          Length = 282

 Score = 96.3 bits (238), Expect = 3e-18
 Identities = 41/56 (73%), Positives = 52/56 (92%)
 Frame = -2

Query: 177 LRILPRVFVGRSENLKQIVKVMSDAARRSLKSRGLHIPPWRKNRFIQNKWFGPYRR 10
           ++ LPRVF+G+SE+LK+IVK+  DAA+RSLKSRGLH+PPWRKNR++QNKWFGP RR
Sbjct: 190 IQTLPRVFIGKSEDLKKIVKLTCDAAKRSLKSRGLHLPPWRKNRYMQNKWFGPCRR 245


Top