BLASTX nr result
ID: Panax21_contig00014864
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00014864 (353 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI31948.3| unnamed protein product [Vitis vinifera] 89 4e-16 ref|XP_002273461.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 89 4e-16 ref|XP_002316133.1| predicted protein [Populus trichocarpa] gi|1... 77 1e-12 ref|XP_002311305.1| predicted protein [Populus trichocarpa] gi|2... 74 2e-11 gb|ABK96350.1| unknown [Populus trichocarpa x Populus deltoides] 74 2e-11 >emb|CBI31948.3| unnamed protein product [Vitis vinifera] Length = 331 Score = 89.0 bits (219), Expect = 4e-16 Identities = 49/93 (52%), Positives = 66/93 (70%), Gaps = 3/93 (3%) Frame = +3 Query: 81 SDQTEMPQPQPQPSFVERLINSRNMDLSVFLPIILGSTNDPS---STNPDQDSSERGDPR 251 + ++E SF+ERLI+SRN DLS+F+P ILG T+ + S +PD ++++ PR Sbjct: 116 ASESEASGASSSASFLERLISSRNRDLSMFIPFILGFTDTTTRQESDDPDDETTDTPTPR 175 Query: 252 DWIILINPLTQGMVVIEGSSSGMDSLLRDLLSK 350 D IILINP TQGM+VIEG+SS DSLLR+L SK Sbjct: 176 DRIILINPFTQGMIVIEGNSS-FDSLLRELASK 207 >ref|XP_002273461.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera] Length = 233 Score = 89.0 bits (219), Expect = 4e-16 Identities = 49/93 (52%), Positives = 66/93 (70%), Gaps = 3/93 (3%) Frame = +3 Query: 81 SDQTEMPQPQPQPSFVERLINSRNMDLSVFLPIILGSTNDPS---STNPDQDSSERGDPR 251 + ++E SF+ERLI+SRN DLS+F+P ILG T+ + S +PD ++++ PR Sbjct: 2 ASESEASGASSSASFLERLISSRNRDLSMFIPFILGFTDTTTRQESDDPDDETTDTPTPR 61 Query: 252 DWIILINPLTQGMVVIEGSSSGMDSLLRDLLSK 350 D IILINP TQGM+VIEG+SS DSLLR+L SK Sbjct: 62 DRIILINPFTQGMIVIEGNSS-FDSLLRELASK 93 >ref|XP_002316133.1| predicted protein [Populus trichocarpa] gi|118483434|gb|ABK93617.1| unknown [Populus trichocarpa] gi|222865173|gb|EEF02304.1| predicted protein [Populus trichocarpa] Length = 218 Score = 77.0 bits (188), Expect = 1e-12 Identities = 46/89 (51%), Positives = 61/89 (68%), Gaps = 2/89 (2%) Frame = +3 Query: 90 TEMPQPQPQPSFVERLINSRNMDLSVFLPIILG--STNDPSSTNPDQDSSERGDPRDWII 263 +E P S ERL+ R+ DLS+FLP ILG STN +PDQ++ + DP + II Sbjct: 3 SETEFPAEFSSMFERLL--RHRDLSLFLPFILGFTSTNTTEQRDPDQEAPQTTDPNERII 60 Query: 264 LINPLTQGMVVIEGSSSGMDSLLRDLLSK 350 LINP TQGMVVIEG++S ++SLLRD+ +K Sbjct: 61 LINPFTQGMVVIEGAAS-LESLLRDIGNK 88 >ref|XP_002311305.1| predicted protein [Populus trichocarpa] gi|222851125|gb|EEE88672.1| predicted protein [Populus trichocarpa] Length = 225 Score = 73.6 bits (179), Expect = 2e-11 Identities = 46/90 (51%), Positives = 61/90 (67%), Gaps = 2/90 (2%) Frame = +3 Query: 90 TEMPQPQPQPSFVERLINSRNMDLSVFLPIILG--STNDPSSTNPDQDSSERGDPRDWII 263 +E P S ERL+ R+ DLS+FLP I G STN +PDQ+ + DP + II Sbjct: 3 SETELPAELSSMFERLL--RHRDLSLFLPFIFGFTSTNSTEERDPDQEP-QTTDPNERII 59 Query: 264 LINPLTQGMVVIEGSSSGMDSLLRDLLSKD 353 LINPLTQGMVVIEG++S ++SLLRD+ +K+ Sbjct: 60 LINPLTQGMVVIEGAAS-LESLLRDIGNKN 88 >gb|ABK96350.1| unknown [Populus trichocarpa x Populus deltoides] Length = 225 Score = 73.6 bits (179), Expect = 2e-11 Identities = 46/90 (51%), Positives = 61/90 (67%), Gaps = 2/90 (2%) Frame = +3 Query: 90 TEMPQPQPQPSFVERLINSRNMDLSVFLPIILG--STNDPSSTNPDQDSSERGDPRDWII 263 +E P S ERL+ R+ DLS+FLP I G STN +PDQ+ + DP + II Sbjct: 3 SETELPAELSSMFERLL--RHRDLSLFLPFIFGFTSTNSTEERDPDQEP-QTTDPNERII 59 Query: 264 LINPLTQGMVVIEGSSSGMDSLLRDLLSKD 353 LINPLTQGMVVIEG++S ++SLLRD+ +K+ Sbjct: 60 LINPLTQGMVVIEGAAS-LESLLRDMGNKN 88