BLASTX nr result

ID: Panax21_contig00014859 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014859
         (617 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW58221.1| histone H3.2 [Zea mays]                                235   4e-60
ref|XP_003621457.1| Histone H3 [Medicago truncatula] gi|35549647...   233   2e-59
ref|XP_003788934.1| PREDICTED: uncharacterized protein LOC100957...   233   3e-59
ref|XP_004065827.1| PREDICTED: histone H3.2-like [Oryzias latipes]    231   8e-59
ref|XP_001865500.1| histone H3.3 type 2 [Culex quinquefasciatus]...   229   2e-58

>gb|AFW58221.1| histone H3.2 [Zea mays]
          Length = 171

 Score =  235 bits (600), Expect = 4e-60
 Identities = 128/159 (80%), Positives = 132/159 (83%), Gaps = 6/159 (3%)
 Frame = -1

Query: 611 SHPINFLISF------SLSKSAKMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVK 450
           SHPI+   SF      +LS+ + MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVK
Sbjct: 13  SHPISNFKSFDRAAPPALSQLSPMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVK 72

Query: 449 KPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXX 270
           KPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRF            
Sbjct: 73  KPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAA 132

Query: 269 XXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 153
               VGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 133 EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 171


>ref|XP_003621457.1| Histone H3 [Medicago truncatula] gi|355496472|gb|AES77675.1|
           Histone H3 [Medicago truncatula]
          Length = 235

 Score =  233 bits (595), Expect = 2e-59
 Identities = 127/151 (84%), Positives = 128/151 (84%)
 Frame = -1

Query: 605 PINFLISFSLSKSAKMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPG 426
           PI FL +FSL     MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPG
Sbjct: 88  PIFFLSNFSLFP---MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPG 144

Query: 425 TVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLF 246
           TVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRF                VGLF
Sbjct: 145 TVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLF 204

Query: 245 EDTNLCAIHAKRVTIMPKDIQLARRIRGERA 153
           EDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 205 EDTNLCAIHAKRVTIMPKDIQLARRIRGERA 235


>ref|XP_003788934.1| PREDICTED: uncharacterized protein LOC100957116 [Otolemur
           garnettii]
          Length = 547

 Score =  233 bits (593), Expect = 3e-59
 Identities = 122/151 (80%), Positives = 128/151 (84%)
 Frame = -1

Query: 605 PINFLISFSLSKSAKMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPG 426
           P+  L+    S+S +MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPG
Sbjct: 397 PMCLLLQLGPSQSVQMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPG 456

Query: 425 TVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLF 246
           TVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRF                VGLF
Sbjct: 457 TVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLF 516

Query: 245 EDTNLCAIHAKRVTIMPKDIQLARRIRGERA 153
           EDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 517 EDTNLCAIHAKRVTIMPKDIQLARRIRGERA 547



 Score =  226 bits (576), Expect = 2e-57
 Identities = 119/138 (86%), Positives = 121/138 (87%)
 Frame = -1

Query: 560 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 381
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 380 LLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTI 201
           LLIRKLPFQRLVREIAQDFKTDLRF                VGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 200 MPKDIQLARRIRGERA*R 147
           MPKDIQLARRIRGERA R
Sbjct: 121 MPKDIQLARRIRGERAGR 138


>ref|XP_004065827.1| PREDICTED: histone H3.2-like [Oryzias latipes]
          Length = 151

 Score =  231 bits (589), Expect = 8e-59
 Identities = 120/142 (84%), Positives = 125/142 (88%)
 Frame = -1

Query: 578 LSKSAKMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRK 399
           + K++KMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+
Sbjct: 10  IQKASKMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRR 69

Query: 398 YQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIH 219
           YQKSTELLIRKLPFQRLVREIAQDFKTDLRF                VGLFEDTNLCAIH
Sbjct: 70  YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIH 129

Query: 218 AKRVTIMPKDIQLARRIRGERA 153
           AKRVTIMPKDIQLARRIRGERA
Sbjct: 130 AKRVTIMPKDIQLARRIRGERA 151


>ref|XP_001865500.1| histone H3.3 type 2 [Culex quinquefasciatus]
           gi|167878389|gb|EDS41772.1| histone H3.3 type 2 [Culex
           quinquefasciatus]
          Length = 158

 Score =  229 bits (585), Expect = 2e-58
 Identities = 121/147 (82%), Positives = 126/147 (85%)
 Frame = -1

Query: 593 LISFSLSKSAKMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVAL 414
           +I  S + + KMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVAL
Sbjct: 12  VIEASSTTAKKMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVAL 71

Query: 413 REIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFEDTN 234
           REIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRF                VGLFEDTN
Sbjct: 72  REIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTN 131

Query: 233 LCAIHAKRVTIMPKDIQLARRIRGERA 153
           LCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 132 LCAIHAKRVTIMPKDIQLARRIRGERA 158


Top