BLASTX nr result

ID: Panax21_contig00014837 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014837
         (743 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36518.3| unnamed protein product [Vitis vinifera]              227   2e-57
ref|XP_002279327.1| PREDICTED: 40S ribosomal protein S12 [Vitis ...   227   2e-57
emb|CBI38929.3| unnamed protein product [Vitis vinifera]              224   1e-56
ref|XP_002272092.1| PREDICTED: 40S ribosomal protein S12-like is...   224   1e-56
ref|XP_002302129.1| predicted protein [Populus trichocarpa] gi|2...   222   7e-56

>emb|CBI36518.3| unnamed protein product [Vitis vinifera]
          Length = 177

 Score =  227 bits (579), Expect = 2e-57
 Identities = 111/124 (89%), Positives = 117/124 (94%)
 Frame = +1

Query: 175 LGERMDTMTALQLVLRKSLAHGGLSRGLHEGAKVIEKHAAQLCVVAEDCNQPDYVKLVKT 354
           LGE +D MTALQLVLRKSLAHGGL RGLHEGAKVIEKHAAQLCV+AEDCNQPDY+KLVK 
Sbjct: 54  LGETLDLMTALQLVLRKSLAHGGLVRGLHEGAKVIEKHAAQLCVLAEDCNQPDYIKLVKA 113

Query: 355 LCADHNVSLISVPSAKTLGEWSGLCKIDSEGNARKVVGCSCVVVKDYGEETEGLVIVQEY 534
           LCADHNVSLISVPSAKTLGEW+GLCKIDSEG ARKVVGCSCVVVKDYGEET GL IVQE+
Sbjct: 114 LCADHNVSLISVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDYGEETPGLHIVQEH 173

Query: 535 VKSH 546
           VKS+
Sbjct: 174 VKSN 177


>ref|XP_002279327.1| PREDICTED: 40S ribosomal protein S12 [Vitis vinifera]
          Length = 140

 Score =  227 bits (579), Expect = 2e-57
 Identities = 111/124 (89%), Positives = 117/124 (94%)
 Frame = +1

Query: 175 LGERMDTMTALQLVLRKSLAHGGLSRGLHEGAKVIEKHAAQLCVVAEDCNQPDYVKLVKT 354
           LGE +D MTALQLVLRKSLAHGGL RGLHEGAKVIEKHAAQLCV+AEDCNQPDY+KLVK 
Sbjct: 17  LGETLDLMTALQLVLRKSLAHGGLVRGLHEGAKVIEKHAAQLCVLAEDCNQPDYIKLVKA 76

Query: 355 LCADHNVSLISVPSAKTLGEWSGLCKIDSEGNARKVVGCSCVVVKDYGEETEGLVIVQEY 534
           LCADHNVSLISVPSAKTLGEW+GLCKIDSEG ARKVVGCSCVVVKDYGEET GL IVQE+
Sbjct: 77  LCADHNVSLISVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDYGEETPGLHIVQEH 136

Query: 535 VKSH 546
           VKS+
Sbjct: 137 VKSN 140


>emb|CBI38929.3| unnamed protein product [Vitis vinifera]
          Length = 228

 Score =  224 bits (571), Expect = 1e-56
 Identities = 108/124 (87%), Positives = 116/124 (93%)
 Frame = +1

Query: 175 LGERMDTMTALQLVLRKSLAHGGLSRGLHEGAKVIEKHAAQLCVVAEDCNQPDYVKLVKT 354
           LGE MD MTALQLVLRKSLAHGGL+RGLHEGAKVIEKHAA LCV+AEDCNQPDYVKLVK 
Sbjct: 105 LGEPMDLMTALQLVLRKSLAHGGLARGLHEGAKVIEKHAAHLCVLAEDCNQPDYVKLVKA 164

Query: 355 LCADHNVSLISVPSAKTLGEWSGLCKIDSEGNARKVVGCSCVVVKDYGEETEGLVIVQEY 534
           LCADHNVSLI+VPSAKTLGEW+GLCKIDSEG ARKVVGCSCVVVKD+GEETE + +VQ+ 
Sbjct: 165 LCADHNVSLITVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDFGEETEAMNVVQQQ 224

Query: 535 VKSH 546
           VKSH
Sbjct: 225 VKSH 228


>ref|XP_002272092.1| PREDICTED: 40S ribosomal protein S12-like isoform 2 [Vitis
           vinifera] gi|225465504|ref|XP_002272051.1| PREDICTED:
           40S ribosomal protein S12-like isoform 1 [Vitis
           vinifera]
          Length = 142

 Score =  224 bits (571), Expect = 1e-56
 Identities = 108/124 (87%), Positives = 116/124 (93%)
 Frame = +1

Query: 175 LGERMDTMTALQLVLRKSLAHGGLSRGLHEGAKVIEKHAAQLCVVAEDCNQPDYVKLVKT 354
           LGE MD MTALQLVLRKSLAHGGL+RGLHEGAKVIEKHAA LCV+AEDCNQPDYVKLVK 
Sbjct: 19  LGEPMDLMTALQLVLRKSLAHGGLARGLHEGAKVIEKHAAHLCVLAEDCNQPDYVKLVKA 78

Query: 355 LCADHNVSLISVPSAKTLGEWSGLCKIDSEGNARKVVGCSCVVVKDYGEETEGLVIVQEY 534
           LCADHNVSLI+VPSAKTLGEW+GLCKIDSEG ARKVVGCSCVVVKD+GEETE + +VQ+ 
Sbjct: 79  LCADHNVSLITVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDFGEETEAMNVVQQQ 138

Query: 535 VKSH 546
           VKSH
Sbjct: 139 VKSH 142


>ref|XP_002302129.1| predicted protein [Populus trichocarpa] gi|222843855|gb|EEE81402.1|
           predicted protein [Populus trichocarpa]
          Length = 145

 Score =  222 bits (565), Expect = 7e-56
 Identities = 105/124 (84%), Positives = 118/124 (95%)
 Frame = +1

Query: 175 LGERMDTMTALQLVLRKSLAHGGLSRGLHEGAKVIEKHAAQLCVVAEDCNQPDYVKLVKT 354
           LGE MD MTALQLVLRKSLAHGGLSRGLHEGAKVIEKHAAQLCV+AEDCNQPDYVKLVK 
Sbjct: 22  LGEPMDLMTALQLVLRKSLAHGGLSRGLHEGAKVIEKHAAQLCVLAEDCNQPDYVKLVKA 81

Query: 355 LCADHNVSLISVPSAKTLGEWSGLCKIDSEGNARKVVGCSCVVVKDYGEETEGLVIVQEY 534
           LCADHNV+L++VPSAKTLGEW+GLCKIDSEG ARKVVGCSCVVVKD+GE+TE L ++Q++
Sbjct: 82  LCADHNVNLLTVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDFGEDTEALNVIQQH 141

Query: 535 VKSH 546
           VK++
Sbjct: 142 VKAN 145


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