BLASTX nr result
ID: Panax21_contig00014823
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00014823 (381 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002280897.1| PREDICTED: zinc finger CCCH domain-containin... 224 6e-57 gb|ABO36623.1| putative RNA-binding protein [Solanum lycopersicum] 221 5e-56 gb|ABC01900.1| RRM-containing RNA-binding protein-like protein [... 220 8e-56 gb|ABB72821.1| RRM-containing RNA-binding protein-like protein [... 220 8e-56 ref|XP_004144722.1| PREDICTED: zinc finger CCCH domain-containin... 219 1e-55 >ref|XP_002280897.1| PREDICTED: zinc finger CCCH domain-containing protein 49-like [Vitis vinifera] Length = 474 Score = 224 bits (571), Expect = 6e-57 Identities = 108/127 (85%), Positives = 120/127 (94%), Gaps = 1/127 (0%) Frame = -3 Query: 379 PSLEPPDDESIRTLYVGGLDARINEQDLRDNFYVHGEIETIKMVLQRACAFVTYTTREGA 200 PSLEPP+DESI+TLYVGGLDAR+ EQDLRD+FY HGEIE+++MVLQRACAFVTYTTREGA Sbjct: 217 PSLEPPEDESIKTLYVGGLDARVTEQDLRDHFYAHGEIESVRMVLQRACAFVTYTTREGA 276 Query: 199 EKAAEELSNKLVIKGLRLKLMWGRPQAPKPESEVSDEARQH-AVAHSGLLPRAVISQQQN 23 EKAAEELSNKLVIKGLRLKLMWGRPQAPKPE E S+EARQ A+AH G+LPRAVISQQQN Sbjct: 277 EKAAEELSNKLVIKGLRLKLMWGRPQAPKPEGESSEEARQQAALAHGGMLPRAVISQQQN 336 Query: 22 QIVQPPG 2 Q++QPPG Sbjct: 337 QVIQPPG 343 >gb|ABO36623.1| putative RNA-binding protein [Solanum lycopersicum] Length = 479 Score = 221 bits (563), Expect = 5e-56 Identities = 109/127 (85%), Positives = 118/127 (92%), Gaps = 1/127 (0%) Frame = -3 Query: 379 PSLEPPDDESIRTLYVGGLDARINEQDLRDNFYVHGEIETIKMVLQRACAFVTYTTREGA 200 PSLEPPDDESIRTLYVGG+DARI EQDLRD+FY HGEIE+IKMV+QR CAFVTYTTREGA Sbjct: 217 PSLEPPDDESIRTLYVGGVDARITEQDLRDHFYAHGEIESIKMVVQRGCAFVTYTTREGA 276 Query: 199 EKAAEELSNKLVIKGLRLKLMWGRPQAPKPESEVSDEARQH-AVAHSGLLPRAVISQQQN 23 KAAEEL+NKLVIKGLRLKL+WGRPQ PKPESEVSDEARQ A+ HSGLLPRAV+SQQQN Sbjct: 277 VKAAEELANKLVIKGLRLKLLWGRPQVPKPESEVSDEARQQAALTHSGLLPRAVVSQQQN 336 Query: 22 QIVQPPG 2 Q +QPPG Sbjct: 337 QPLQPPG 343 >gb|ABC01900.1| RRM-containing RNA-binding protein-like protein [Solanum tuberosum] Length = 487 Score = 220 bits (561), Expect = 8e-56 Identities = 109/127 (85%), Positives = 118/127 (92%), Gaps = 1/127 (0%) Frame = -3 Query: 379 PSLEPPDDESIRTLYVGGLDARINEQDLRDNFYVHGEIETIKMVLQRACAFVTYTTREGA 200 PSLEPPDDESIRTLYVGG+DARI+EQDLRD FY HGEIE+IKMVLQR CAFVTYTTREGA Sbjct: 217 PSLEPPDDESIRTLYVGGVDARISEQDLRDQFYAHGEIESIKMVLQRGCAFVTYTTREGA 276 Query: 199 EKAAEELSNKLVIKGLRLKLMWGRPQAPKPESEVSDEARQH-AVAHSGLLPRAVISQQQN 23 KAAEEL+NKLVIKGLRLKL+WGRPQAPKP++E+SDEARQ AV HSGLLPRAVISQQQN Sbjct: 277 VKAAEELANKLVIKGLRLKLLWGRPQAPKPDTELSDEARQQAAVTHSGLLPRAVISQQQN 336 Query: 22 QIVQPPG 2 Q+ PPG Sbjct: 337 QLPPPPG 343 >gb|ABB72821.1| RRM-containing RNA-binding protein-like protein [Solanum tuberosum] Length = 462 Score = 220 bits (561), Expect = 8e-56 Identities = 109/127 (85%), Positives = 118/127 (92%), Gaps = 1/127 (0%) Frame = -3 Query: 379 PSLEPPDDESIRTLYVGGLDARINEQDLRDNFYVHGEIETIKMVLQRACAFVTYTTREGA 200 PSLEPPDDESIRTLYVGG+DARI+EQDLRD FY HGEIE+IKMVLQR CAFVTYTTREGA Sbjct: 217 PSLEPPDDESIRTLYVGGVDARISEQDLRDQFYAHGEIESIKMVLQRGCAFVTYTTREGA 276 Query: 199 EKAAEELSNKLVIKGLRLKLMWGRPQAPKPESEVSDEARQH-AVAHSGLLPRAVISQQQN 23 KAAEEL+NKLVIKGLRLKL+WGRPQAPKP++E+SDEARQ AV HSGLLPRAVISQQQN Sbjct: 277 VKAAEELANKLVIKGLRLKLLWGRPQAPKPDTELSDEARQQAAVTHSGLLPRAVISQQQN 336 Query: 22 QIVQPPG 2 Q+ PPG Sbjct: 337 QLPPPPG 343 >ref|XP_004144722.1| PREDICTED: zinc finger CCCH domain-containing protein 40-like [Cucumis sativus] gi|449525922|ref|XP_004169965.1| PREDICTED: zinc finger CCCH domain-containing protein 40-like [Cucumis sativus] Length = 517 Score = 219 bits (559), Expect = 1e-55 Identities = 109/126 (86%), Positives = 118/126 (93%) Frame = -3 Query: 379 PSLEPPDDESIRTLYVGGLDARINEQDLRDNFYVHGEIETIKMVLQRACAFVTYTTREGA 200 PSLEPP+DESIRTLYVGGLDAR++EQDLRDNFY HGEIE+I+MVLQRACAFVTYTTREGA Sbjct: 217 PSLEPPEDESIRTLYVGGLDARVSEQDLRDNFYAHGEIESIRMVLQRACAFVTYTTREGA 276 Query: 199 EKAAEELSNKLVIKGLRLKLMWGRPQAPKPESEVSDEARQHAVAHSGLLPRAVISQQQNQ 20 EKAAEELSNKLVI+GLRLKLMWGRPQAPK E E SDEA+Q AVAHSG+LPRAVISQQ NQ Sbjct: 277 EKAAEELSNKLVIRGLRLKLMWGRPQAPKAEIEGSDEAKQAAVAHSGMLPRAVISQQHNQ 336 Query: 19 IVQPPG 2 + PPG Sbjct: 337 L-HPPG 341