BLASTX nr result

ID: Panax21_contig00014801 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014801
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310362.1| chromatin remodeling complex subunit [Populu...   211   8e-53
ref|XP_002513133.1| DNA repair helicase rad5,16, putative [Ricin...   210   1e-52
ref|XP_002267403.2| PREDICTED: uncharacterized ATP-dependent hel...   207   8e-52
emb|CBI35366.3| unnamed protein product [Vitis vinifera]              207   8e-52
ref|XP_004172034.1| PREDICTED: DNA repair protein rad5-like, par...   205   3e-51

>ref|XP_002310362.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222853265|gb|EEE90812.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 923

 Score =  211 bits (536), Expect = 8e-53
 Identities = 105/112 (93%), Positives = 109/112 (97%)
 Frame = -1

Query: 543  VKEFNTDPEVTVMLMSLKAGNLGLNMVAASHVILMDLWWNPTTEDQAIDRAHRIGQTRPV 364
            VK+FNTDPEVTVMLMSLKAGNLGLNMVAA HVIL+DLWWNPTTEDQAIDRAHRIGQTRPV
Sbjct: 811  VKDFNTDPEVTVMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPV 870

Query: 363  TVSRLTIKDTVEDRILALQEEKRKMVASAFGEDQSQGSGTRLTVEDLKYLFM 208
            TV+RLTIKDTVEDRILALQ+EKRKMVASAFGEDQS GS TRLTVEDLKYLFM
Sbjct: 871  TVTRLTIKDTVEDRILALQDEKRKMVASAFGEDQSGGSATRLTVEDLKYLFM 922


>ref|XP_002513133.1| DNA repair helicase rad5,16, putative [Ricinus communis]
            gi|223548144|gb|EEF49636.1| DNA repair helicase rad5,16,
            putative [Ricinus communis]
          Length = 993

 Score =  210 bits (535), Expect = 1e-52
 Identities = 104/113 (92%), Positives = 109/113 (96%)
 Frame = -1

Query: 543  VKEFNTDPEVTVMLMSLKAGNLGLNMVAASHVILMDLWWNPTTEDQAIDRAHRIGQTRPV 364
            VK+FNTDPEVTVMLMSLKAGNLGLNMVAA HVIL+DLWWNPTTEDQA+DRAHRIGQTRPV
Sbjct: 877  VKDFNTDPEVTVMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQAVDRAHRIGQTRPV 936

Query: 363  TVSRLTIKDTVEDRILALQEEKRKMVASAFGEDQSQGSGTRLTVEDLKYLFMG 205
            TV+RLTIKDTVEDRILALQEEKR+MVASAFGED S GS TRLTVEDLKYLFMG
Sbjct: 937  TVTRLTIKDTVEDRILALQEEKRRMVASAFGEDASGGSATRLTVEDLKYLFMG 989


>ref|XP_002267403.2| PREDICTED: uncharacterized ATP-dependent helicase C23E6.02-like
            [Vitis vinifera]
          Length = 1013

 Score =  207 bits (527), Expect = 8e-52
 Identities = 103/112 (91%), Positives = 109/112 (97%)
 Frame = -1

Query: 543  VKEFNTDPEVTVMLMSLKAGNLGLNMVAASHVILMDLWWNPTTEDQAIDRAHRIGQTRPV 364
            VK+FNTDPEVTVMLMSLKAGNLGLNMVAAS VIL+DLWWNPTTEDQA+DRAHRIGQTRPV
Sbjct: 901  VKDFNTDPEVTVMLMSLKAGNLGLNMVAASLVILLDLWWNPTTEDQAVDRAHRIGQTRPV 960

Query: 363  TVSRLTIKDTVEDRILALQEEKRKMVASAFGEDQSQGSGTRLTVEDLKYLFM 208
            TVSR+TIKDTVEDRILALQE+KRKMVASAFGEDQ+ GS TRLTVEDLKYLFM
Sbjct: 961  TVSRITIKDTVEDRILALQEDKRKMVASAFGEDQTGGSATRLTVEDLKYLFM 1012


>emb|CBI35366.3| unnamed protein product [Vitis vinifera]
          Length = 907

 Score =  207 bits (527), Expect = 8e-52
 Identities = 103/112 (91%), Positives = 109/112 (97%)
 Frame = -1

Query: 543  VKEFNTDPEVTVMLMSLKAGNLGLNMVAASHVILMDLWWNPTTEDQAIDRAHRIGQTRPV 364
            VK+FNTDPEVTVMLMSLKAGNLGLNMVAAS VIL+DLWWNPTTEDQA+DRAHRIGQTRPV
Sbjct: 795  VKDFNTDPEVTVMLMSLKAGNLGLNMVAASLVILLDLWWNPTTEDQAVDRAHRIGQTRPV 854

Query: 363  TVSRLTIKDTVEDRILALQEEKRKMVASAFGEDQSQGSGTRLTVEDLKYLFM 208
            TVSR+TIKDTVEDRILALQE+KRKMVASAFGEDQ+ GS TRLTVEDLKYLFM
Sbjct: 855  TVSRITIKDTVEDRILALQEDKRKMVASAFGEDQTGGSATRLTVEDLKYLFM 906


>ref|XP_004172034.1| PREDICTED: DNA repair protein rad5-like, partial [Cucumis sativus]
          Length = 379

 Score =  205 bits (522), Expect = 3e-51
 Identities = 99/112 (88%), Positives = 109/112 (97%)
 Frame = -1

Query: 543 VKEFNTDPEVTVMLMSLKAGNLGLNMVAASHVILMDLWWNPTTEDQAIDRAHRIGQTRPV 364
           VK+FN+DPE++VMLMSLKAGNLGLNMVAA HVIL+DLWWNPTTEDQA+DRAHRIGQTRPV
Sbjct: 267 VKDFNSDPEISVMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQAVDRAHRIGQTRPV 326

Query: 363 TVSRLTIKDTVEDRILALQEEKRKMVASAFGEDQSQGSGTRLTVEDLKYLFM 208
           TVSR+T+KDTVEDRILALQEEKRKMVASAFGEDQS GS +RLTVEDL+YLFM
Sbjct: 327 TVSRITVKDTVEDRILALQEEKRKMVASAFGEDQSGGSASRLTVEDLRYLFM 378


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