BLASTX nr result

ID: Panax21_contig00014756 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014756
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284183.1| PREDICTED: VHS domain-containing protein At3...   179   2e-43
emb|CAN70334.1| hypothetical protein VITISV_011432 [Vitis vinifera]   177   8e-43
ref|XP_002298235.1| predicted protein [Populus trichocarpa] gi|2...   169   2e-40
ref|XP_002515996.1| conserved hypothetical protein [Ricinus comm...   164   7e-39
ref|XP_003626982.1| VHS domain-containing protein [Medicago trun...   124   8e-27

>ref|XP_002284183.1| PREDICTED: VHS domain-containing protein At3g16270 [Vitis vinifera]
           gi|297743233|emb|CBI36100.3| unnamed protein product
           [Vitis vinifera]
          Length = 709

 Score =  179 bits (455), Expect = 2e-43
 Identities = 88/143 (61%), Positives = 108/143 (75%), Gaps = 2/143 (1%)
 Frame = +3

Query: 3   VNDLMSGLSIKGNAVKHSETS--PRALSDTIFTDSTTNPSHQISNDSFNGMFGPQTSVMN 176
           VNDLM+GLSI GN    ++    P ALS+T+F+DS +    Q+SND+ NG FG +T+ MN
Sbjct: 528 VNDLMAGLSINGNVSNTTQKGMLPGALSETVFSDSNSYSPKQVSNDALNG-FGSETAGMN 586

Query: 177 VNPMFPMGSMPYNLPPGIMFNPAFPSQSINYGDMGSLLAQQQFLVTMSNFQQFGNLHSQN 356
            N MFP+GSMPYN+PPGIMFNPAFPSQ +NYG MG+  AQQQFL  MSNFQQ GNL SQ+
Sbjct: 587 ANAMFPLGSMPYNIPPGIMFNPAFPSQPMNYGAMGNFFAQQQFLAAMSNFQQLGNLTSQS 646

Query: 357 SGLTHAEATQGGGYSSSLPDVFN 425
           +G+ HA  T  GGYSS LPD+F+
Sbjct: 647 AGMGHAGGTMEGGYSSPLPDIFH 669


>emb|CAN70334.1| hypothetical protein VITISV_011432 [Vitis vinifera]
          Length = 1694

 Score =  177 bits (449), Expect = 8e-43
 Identities = 87/143 (60%), Positives = 107/143 (74%), Gaps = 2/143 (1%)
 Frame = +3

Query: 3    VNDLMSGLSIKGNAVKHSETS--PRALSDTIFTDSTTNPSHQISNDSFNGMFGPQTSVMN 176
            VNDLM+GLSI GN    ++    P ALS+ +F+DS +    Q+SND+ NG FG +T+ MN
Sbjct: 1513 VNDLMAGLSINGNVSNTTQKGMLPGALSEXVFSDSNSYSPKQVSNDALNG-FGSETAGMN 1571

Query: 177  VNPMFPMGSMPYNLPPGIMFNPAFPSQSINYGDMGSLLAQQQFLVTMSNFQQFGNLHSQN 356
             N MFP+GSMPYN+PPGIMFNPAFPSQ +NYG MG+  AQQQFL  MSNFQQ GNL SQ+
Sbjct: 1572 ANAMFPLGSMPYNIPPGIMFNPAFPSQPMNYGAMGNFFAQQQFLAAMSNFQQLGNLTSQS 1631

Query: 357  SGLTHAEATQGGGYSSSLPDVFN 425
            +G+ HA  T  GGYSS LPD+F+
Sbjct: 1632 AGMGHAGGTMEGGYSSPLPDIFH 1654


>ref|XP_002298235.1| predicted protein [Populus trichocarpa] gi|222845493|gb|EEE83040.1|
           predicted protein [Populus trichocarpa]
          Length = 703

 Score =  169 bits (428), Expect = 2e-40
 Identities = 78/140 (55%), Positives = 102/140 (72%)
 Frame = +3

Query: 3   VNDLMSGLSIKGNAVKHSETSPRALSDTIFTDSTTNPSHQISNDSFNGMFGPQTSVMNVN 182
           V+ LM+ +SI  N  K   TSP   S+++F+D T+NPSHQ++ND+ NG  G   + +NVN
Sbjct: 523 VSGLMASMSINDNVSKLQVTSPAVFSESLFSDLTSNPSHQVTNDALNGSLGLSATGINVN 582

Query: 183 PMFPMGSMPYNLPPGIMFNPAFPSQSINYGDMGSLLAQQQFLVTMSNFQQFGNLHSQNSG 362
           P+ P G++PYN+ PGIM NPAF SQ INY  MG+ LAQQQFL TMSN Q   NL+ QN+G
Sbjct: 583 PLHPSGTVPYNMHPGIMLNPAFHSQPINYAAMGNFLAQQQFLATMSNIQHLSNLNVQNAG 642

Query: 363 LTHAEATQGGGYSSSLPDVF 422
           ++HA  T GGGYSS+LPD+F
Sbjct: 643 VSHASGTDGGGYSSALPDIF 662


>ref|XP_002515996.1| conserved hypothetical protein [Ricinus communis]
           gi|223544901|gb|EEF46416.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 699

 Score =  164 bits (415), Expect = 7e-39
 Identities = 79/142 (55%), Positives = 100/142 (70%), Gaps = 2/142 (1%)
 Frame = +3

Query: 3   VNDLMSGLSIKGNAVKHSE--TSPRALSDTIFTDSTTNPSHQISNDSFNGMFGPQTSVMN 176
           VNDLMSG+SI  N  K  +  T+   L + IF+DS+ +  HQ SND+   + G Q + MN
Sbjct: 517 VNDLMSGMSINENVSKSKQPDTAAGGLPENIFSDSSNHSGHQSSNDALTSILGSQATAMN 576

Query: 177 VNPMFPMGSMPYNLPPGIMFNPAFPSQSINYGDMGSLLAQQQFLVTMSNFQQFGNLHSQN 356
           +NPMFP G+MPYN+PPGIM N AF +Q INYG MG+ LA QQFL +MSNFQ   NL++QN
Sbjct: 577 LNPMFPSGTMPYNIPPGIMLNTAFQTQPINYGAMGNFLAHQQFLASMSNFQHLSNLNAQN 636

Query: 357 SGLTHAEATQGGGYSSSLPDVF 422
            G+  A  T GGGYSS+LPD+F
Sbjct: 637 PGVDPAVGTNGGGYSSALPDIF 658


>ref|XP_003626982.1| VHS domain-containing protein [Medicago truncatula]
           gi|355521004|gb|AET01458.1| VHS domain-containing
           protein [Medicago truncatula]
          Length = 709

 Score =  124 bits (311), Expect = 8e-27
 Identities = 65/144 (45%), Positives = 91/144 (63%), Gaps = 4/144 (2%)
 Frame = +3

Query: 3   VNDLMSGLSIKGNAVKHSETSPRALSDTIFTDSTTNP--SHQISNDSFNGMFGPQTSVM- 173
           V+DLM GLSI  N    S T P+  S T+ ++S  +   +H + N++  GM G Q   + 
Sbjct: 530 VSDLMGGLSIDENT---SSTKPKGTSSTVQSESLFSGLNNHTLDNNTLGGMLGSQAQPIG 586

Query: 174 -NVNPMFPMGSMPYNLPPGIMFNPAFPSQSINYGDMGSLLAQQQFLVTMSNFQQFGNLHS 350
            NVNPMFP G MPYN+PPGIM N  +P+Q +NYG MG++LAQQQ L TM+NFQ   N++ 
Sbjct: 587 FNVNPMFPTGHMPYNMPPGIMLNQPYPTQPLNYGAMGTILAQQQLLATMANFQHISNVNM 646

Query: 351 QNSGLTHAEATQGGGYSSSLPDVF 422
           ++ G++      G   +S LPD+F
Sbjct: 647 RDGGVSQMVGPNG---ASPLPDIF 667


Top