BLASTX nr result

ID: Panax21_contig00014755 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014755
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284183.1| PREDICTED: VHS domain-containing protein At3...   181   7e-44
emb|CAN70334.1| hypothetical protein VITISV_011432 [Vitis vinifera]   178   4e-43
ref|XP_002298235.1| predicted protein [Populus trichocarpa] gi|2...   169   3e-40
ref|XP_002515996.1| conserved hypothetical protein [Ricinus comm...   165   4e-39
ref|XP_003626982.1| VHS domain-containing protein [Medicago trun...   126   2e-27

>ref|XP_002284183.1| PREDICTED: VHS domain-containing protein At3g16270 [Vitis vinifera]
           gi|297743233|emb|CBI36100.3| unnamed protein product
           [Vitis vinifera]
          Length = 709

 Score =  181 bits (458), Expect = 7e-44
 Identities = 89/143 (62%), Positives = 107/143 (74%), Gaps = 2/143 (1%)
 Frame = +3

Query: 3   VNDLMSGLSIKGNAVKHSETN--PRALSDTIFTDSTTNPSHQISNDTFNGMFGPQTAVMN 176
           VNDLM+GLSI GN    ++    P ALS+T+F+DS +    Q+SND  NG FG +TA MN
Sbjct: 528 VNDLMAGLSINGNVSNTTQKGMLPGALSETVFSDSNSYSPKQVSNDALNG-FGSETAGMN 586

Query: 177 VNPMFPMGSMPYNLPPGVMFNPAFPSQSINYGDMGSVLAQQQFLATMSNFQQFGNLHSQN 356
            N MFP+GSMPYN+PPG+MFNPAFPSQ +NYG MG+  AQQQFLA MSNFQQ GNL SQ+
Sbjct: 587 ANAMFPLGSMPYNIPPGIMFNPAFPSQPMNYGAMGNFFAQQQFLAAMSNFQQLGNLTSQS 646

Query: 357 TGLTHAEATQGGGYSSALPDVFN 425
            G+ HA  T  GGYSS LPD+F+
Sbjct: 647 AGMGHAGGTMEGGYSSPLPDIFH 669


>emb|CAN70334.1| hypothetical protein VITISV_011432 [Vitis vinifera]
          Length = 1694

 Score =  178 bits (452), Expect = 4e-43
 Identities = 88/143 (61%), Positives = 106/143 (74%), Gaps = 2/143 (1%)
 Frame = +3

Query: 3    VNDLMSGLSIKGNAVKHSETN--PRALSDTIFTDSTTNPSHQISNDTFNGMFGPQTAVMN 176
            VNDLM+GLSI GN    ++    P ALS+ +F+DS +    Q+SND  NG FG +TA MN
Sbjct: 1513 VNDLMAGLSINGNVSNTTQKGMLPGALSEXVFSDSNSYSPKQVSNDALNG-FGSETAGMN 1571

Query: 177  VNPMFPMGSMPYNLPPGVMFNPAFPSQSINYGDMGSVLAQQQFLATMSNFQQFGNLHSQN 356
             N MFP+GSMPYN+PPG+MFNPAFPSQ +NYG MG+  AQQQFLA MSNFQQ GNL SQ+
Sbjct: 1572 ANAMFPLGSMPYNIPPGIMFNPAFPSQPMNYGAMGNFFAQQQFLAAMSNFQQLGNLTSQS 1631

Query: 357  TGLTHAEATQGGGYSSALPDVFN 425
             G+ HA  T  GGYSS LPD+F+
Sbjct: 1632 AGMGHAGGTMEGGYSSPLPDIFH 1654


>ref|XP_002298235.1| predicted protein [Populus trichocarpa] gi|222845493|gb|EEE83040.1|
           predicted protein [Populus trichocarpa]
          Length = 703

 Score =  169 bits (427), Expect = 3e-40
 Identities = 78/140 (55%), Positives = 100/140 (71%)
 Frame = +3

Query: 3   VNDLMSGLSIKGNAVKHSETNPRALSDTIFTDSTTNPSHQISNDTFNGMFGPQTAVMNVN 182
           V+ LM+ +SI  N  K   T+P   S+++F+D T+NPSHQ++ND  NG  G     +NVN
Sbjct: 523 VSGLMASMSINDNVSKLQVTSPAVFSESLFSDLTSNPSHQVTNDALNGSLGLSATGINVN 582

Query: 183 PMFPMGSMPYNLPPGVMFNPAFPSQSINYGDMGSVLAQQQFLATMSNFQQFGNLHSQNTG 362
           P+ P G++PYN+ PG+M NPAF SQ INY  MG+ LAQQQFLATMSN Q   NL+ QN G
Sbjct: 583 PLHPSGTVPYNMHPGIMLNPAFHSQPINYAAMGNFLAQQQFLATMSNIQHLSNLNVQNAG 642

Query: 363 LTHAEATQGGGYSSALPDVF 422
           ++HA  T GGGYSSALPD+F
Sbjct: 643 VSHASGTDGGGYSSALPDIF 662


>ref|XP_002515996.1| conserved hypothetical protein [Ricinus communis]
           gi|223544901|gb|EEF46416.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 699

 Score =  165 bits (417), Expect = 4e-39
 Identities = 80/142 (56%), Positives = 99/142 (69%), Gaps = 2/142 (1%)
 Frame = +3

Query: 3   VNDLMSGLSIKGNAVKHSETNPRA--LSDTIFTDSTTNPSHQISNDTFNGMFGPQTAVMN 176
           VNDLMSG+SI  N  K  + +  A  L + IF+DS+ +  HQ SND    + G Q   MN
Sbjct: 517 VNDLMSGMSINENVSKSKQPDTAAGGLPENIFSDSSNHSGHQSSNDALTSILGSQATAMN 576

Query: 177 VNPMFPMGSMPYNLPPGVMFNPAFPSQSINYGDMGSVLAQQQFLATMSNFQQFGNLHSQN 356
           +NPMFP G+MPYN+PPG+M N AF +Q INYG MG+ LA QQFLA+MSNFQ   NL++QN
Sbjct: 577 LNPMFPSGTMPYNIPPGIMLNTAFQTQPINYGAMGNFLAHQQFLASMSNFQHLSNLNAQN 636

Query: 357 TGLTHAEATQGGGYSSALPDVF 422
            G+  A  T GGGYSSALPD+F
Sbjct: 637 PGVDPAVGTNGGGYSSALPDIF 658


>ref|XP_003626982.1| VHS domain-containing protein [Medicago truncatula]
           gi|355521004|gb|AET01458.1| VHS domain-containing
           protein [Medicago truncatula]
          Length = 709

 Score =  126 bits (316), Expect = 2e-27
 Identities = 66/144 (45%), Positives = 92/144 (63%), Gaps = 4/144 (2%)
 Frame = +3

Query: 3   VNDLMSGLSIKGNAVKHSETNPRALSDTIFTDSTTNP--SHQISNDTFNGMFGPQTAVM- 173
           V+DLM GLSI  N    S T P+  S T+ ++S  +   +H + N+T  GM G Q   + 
Sbjct: 530 VSDLMGGLSIDENT---SSTKPKGTSSTVQSESLFSGLNNHTLDNNTLGGMLGSQAQPIG 586

Query: 174 -NVNPMFPMGSMPYNLPPGVMFNPAFPSQSINYGDMGSVLAQQQFLATMSNFQQFGNLHS 350
            NVNPMFP G MPYN+PPG+M N  +P+Q +NYG MG++LAQQQ LATM+NFQ   N++ 
Sbjct: 587 FNVNPMFPTGHMPYNMPPGIMLNQPYPTQPLNYGAMGTILAQQQLLATMANFQHISNVNM 646

Query: 351 QNTGLTHAEATQGGGYSSALPDVF 422
           ++ G++      G   +S LPD+F
Sbjct: 647 RDGGVSQMVGPNG---ASPLPDIF 667


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