BLASTX nr result

ID: Panax21_contig00014753 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014753
         (887 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEH27422.1| ribosomal protein S3 [Icacina mannii]                  168   2e-39
gb|ADL64016.1| ribosomal protein S3 [Tapiscia sinensis]               160   4e-37
ref|YP_005090455.1| ribosomal protein S3 (mitochondrion) [Millet...   159   6e-37
gb|AEH27408.1| ribosomal protein S3 [Syringa vulgaris]                159   8e-37
gb|AEH27099.1| ribosomal protein S3 [Fontanesia phillyreoides] g...   159   8e-37

>gb|AEH27422.1| ribosomal protein S3 [Icacina mannii]
          Length = 503

 Score =  168 bits (425), Expect = 2e-39
 Identities = 101/181 (55%), Positives = 107/181 (59%), Gaps = 10/181 (5%)
 Frame = +2

Query: 374 VINFFPKRTFIHFFLPXXXXXXXXXXXXXLGKGWGPLRKVGPIRCLHSRDRTEE-RNEMR 550
           +I  FPKRTFIHFFLP              GKGW    KVGPI CLHS D TEE RNEMR
Sbjct: 18  IILHFPKRTFIHFFLPRRPRRLKRREKSRPGKGWWAFGKVGPIGCLHSSDGTEEERNEMR 77

Query: 551 GQGTGKRVESISLDDSEKQNKIRIWPKKKQ---------PIKNNISKLLRDSGAFKHPKY 703
           G+G GKRVESI LDD EKQN+IRIWPKKKQ          IK N+SK LR SGAFKHPKY
Sbjct: 78  GRGAGKRVESIRLDDREKQNEIRIWPKKKQRYGYHDRSPSIKKNLSKSLRVSGAFKHPKY 137

Query: 704 AGVVNDIDFLIKNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTSHLPKRALLPAVRPSF 883
           AGVVNDI FLI+ND                             TSHL KR  LPAVRPS 
Sbjct: 138 AGVVNDIAFLIENDDSFRKTKLFKFFFPKKSRSDGP-------TSHLLKRT-LPAVRPSL 189

Query: 884 H 886
           +
Sbjct: 190 N 190


>gb|ADL64016.1| ribosomal protein S3 [Tapiscia sinensis]
          Length = 480

 Score =  160 bits (405), Expect = 4e-37
 Identities = 100/184 (54%), Positives = 107/184 (58%), Gaps = 13/184 (7%)
 Frame = +2

Query: 374 VINFFPKRTFIHFFLPXXXXXXXXXXXXXLGKG---WGPLRKVGPIRCLHSRDRTEE-RN 541
           +I  FPKRTFIHFFLP              GK    W    KVGPI CLHS D TEE RN
Sbjct: 7   IILHFPKRTFIHFFLPRRPRRLKRREKTRPGKEKGRWWTFGKVGPIGCLHSSDDTEEERN 66

Query: 542 EMRGQGTGKRVESISLDDSEKQNKIRIWPKKKQ---------PIKNNISKLLRDSGAFKH 694
           E+RG+G GKRVESI LDD EKQN+IRIWPKKKQ          IKNN+SK LR SGAFKH
Sbjct: 67  EVRGRGAGKRVESIRLDDREKQNEIRIWPKKKQRYGYHDRSPSIKNNLSKSLRVSGAFKH 126

Query: 695 PKYAGVVNDIDFLIKNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTSHLPKRALLPAVR 874
           PKYAGVVNDI FLI+ND                             TSHL KR  LPAVR
Sbjct: 127 PKYAGVVNDIAFLIENDDSFRKTKLFKFFFPKKSRSDGP-------TSHLLKRT-LPAVR 178

Query: 875 PSFH 886
           PS +
Sbjct: 179 PSLN 182


>ref|YP_005090455.1| ribosomal protein S3 (mitochondrion) [Millettia pinnata]
           gi|357197318|gb|AET62915.1| ribosomal protein S3
           (mitochondrion) [Millettia pinnata]
          Length = 565

 Score =  159 bits (403), Expect = 6e-37
 Identities = 99/180 (55%), Positives = 105/180 (58%), Gaps = 13/180 (7%)
 Frame = +2

Query: 386 FPKRTFIHFFLPXXXXXXXXXXXXXLGKG---WGPLRKVGPIRCLHSRDRTEE-RNEMRG 553
           FPKRTFIHFFLP              GKG   W    KVGPI CLHS D TEE RNE+RG
Sbjct: 65  FPKRTFIHFFLPRRPRRLKRRKKSRPGKGKGRWWAFGKVGPIGCLHSSDNTEEERNEVRG 124

Query: 554 QGTGKRVESISLDDSEKQNKIRIWPKKKQ---------PIKNNISKLLRDSGAFKHPKYA 706
           +  GKRVESI LDD EKQN+IRIWPKKKQ          IK N+SKLLR SGAFKHPKYA
Sbjct: 125 RRAGKRVESIRLDDREKQNEIRIWPKKKQRYGYHDRSPSIKKNLSKLLRVSGAFKHPKYA 184

Query: 707 GVVNDIDFLIKNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTSHLPKRALLPAVRPSFH 886
           GVVNDI FLI+ND                             TSHL KR  LPAVRPS +
Sbjct: 185 GVVNDIAFLIENDDSFRKLKFFKLFLPKKSRSDGP-------TSHLFKRT-LPAVRPSLN 236


>gb|AEH27408.1| ribosomal protein S3 [Syringa vulgaris]
          Length = 504

 Score =  159 bits (402), Expect = 8e-37
 Identities = 99/184 (53%), Positives = 107/184 (58%), Gaps = 13/184 (7%)
 Frame = +2

Query: 374 VINFFPKRTFIHFFLPXXXXXXXXXXXXXLGKG---WGPLRKVGPIRCLHSRDRTEE-RN 541
           +I  FPKRTFIHFFLP              GK    W    KVGPI CLHS D TEE RN
Sbjct: 18  IILHFPKRTFIHFFLPRRPRRLKRREKSRPGKAKGRWWEFGKVGPIGCLHSSDGTEEERN 77

Query: 542 EMRGQGTGKRVESISLDDSEKQNKIRIWPKKKQ---------PIKNNISKLLRDSGAFKH 694
           E+RG+G+GKRVESI LDD EKQN+IRIWPKKKQ          IK N+SK LR SGAFKH
Sbjct: 78  EVRGRGSGKRVESIRLDDREKQNEIRIWPKKKQGYGYHDRSPSIKKNLSKSLRVSGAFKH 137

Query: 695 PKYAGVVNDIDFLIKNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTSHLPKRALLPAVR 874
           PKYAGVVNDI FLI+ND                             TSHL KR  LPAVR
Sbjct: 138 PKYAGVVNDIAFLIENDDSFRKTKLFKFFFPKKSRSDGP-------TSHLLKRT-LPAVR 189

Query: 875 PSFH 886
           PS +
Sbjct: 190 PSLN 193


>gb|AEH27099.1| ribosomal protein S3 [Fontanesia phillyreoides]
           gi|335059655|gb|AEH27102.1| ribosomal protein S3
           [Carlemannia tetragona]
          Length = 506

 Score =  159 bits (402), Expect = 8e-37
 Identities = 99/184 (53%), Positives = 107/184 (58%), Gaps = 13/184 (7%)
 Frame = +2

Query: 374 VINFFPKRTFIHFFLPXXXXXXXXXXXXXLGKG---WGPLRKVGPIRCLHSRDRTEE-RN 541
           +I  FPKRTFIHFFLP              GK    W    KVGPI CLHS D TEE RN
Sbjct: 18  IILHFPKRTFIHFFLPRRPRRLKRREKSRPGKAKGRWWEFGKVGPIGCLHSSDGTEEERN 77

Query: 542 EMRGQGTGKRVESISLDDSEKQNKIRIWPKKKQ---------PIKNNISKLLRDSGAFKH 694
           E+RG+G+GKRVESI LDD EKQN+IRIWPKKKQ          IK N+SK LR SGAFKH
Sbjct: 78  EVRGRGSGKRVESIRLDDREKQNEIRIWPKKKQGYGYHDRSPSIKKNLSKSLRVSGAFKH 137

Query: 695 PKYAGVVNDIDFLIKNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTSHLPKRALLPAVR 874
           PKYAGVVNDI FLI+ND                             TSHL KR  LPAVR
Sbjct: 138 PKYAGVVNDIAFLIENDDSFRKTKLFKFFFPKKSRSDGP-------TSHLLKRT-LPAVR 189

Query: 875 PSFH 886
           PS +
Sbjct: 190 PSLN 193


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