BLASTX nr result

ID: Panax21_contig00014738 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014738
         (579 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330370.1| predicted protein [Populus trichocarpa] gi|2...    57   9e-17
gb|ABK96679.1| unknown [Populus trichocarpa x Populus deltoides]       57   9e-17
ref|XP_002317550.1| predicted protein [Populus trichocarpa] gi|2...    57   9e-16
ref|XP_002528881.1| conserved hypothetical protein [Ricinus comm...    57   2e-15
ref|XP_002317551.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-15

>ref|XP_002330370.1| predicted protein [Populus trichocarpa] gi|222871755|gb|EEF08886.1|
           predicted protein [Populus trichocarpa]
          Length = 776

 Score = 57.4 bits (137), Expect(2) = 9e-17
 Identities = 28/49 (57%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
 Frame = +2

Query: 2   LSHAWKLYTEGIFLELTDDAIV-NCNHFEVSRAIQIGLLCVQPYPKDRP 145
           L HAW+L+ EG   EL  ++IV +CN +EV R+I IGLLCVQ  P+DRP
Sbjct: 674 LGHAWRLFIEGRSSELIVESIVESCNFYEVLRSIHIGLLCVQRSPRDRP 722



 Score = 54.7 bits (130), Expect(2) = 9e-17
 Identities = 28/55 (50%), Positives = 33/55 (60%)
 Frame = +3

Query: 222 PSMSTVVSMLSNENELPRPKEPGFFTERQHGPDXXXXXXXXXXCNELTVTLFAPR 386
           PSMSTVV ML +E+ELP+PKEPGFFT R  G             NE+T+T    R
Sbjct: 722 PSMSTVVMMLGSESELPQPKEPGFFTTRDVGKATSSSTQSKVSVNEITMTQLEAR 776


>gb|ABK96679.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 665

 Score = 57.4 bits (137), Expect(2) = 9e-17
 Identities = 28/49 (57%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
 Frame = +2

Query: 2   LSHAWKLYTEGIFLELTDDAIV-NCNHFEVSRAIQIGLLCVQPYPKDRP 145
           L HAW+L+ EG   EL  ++IV +CN +EV R+I IGLLCVQ  P+DRP
Sbjct: 563 LGHAWRLFIEGRSSELIVESIVESCNFYEVLRSIHIGLLCVQRSPRDRP 611



 Score = 54.7 bits (130), Expect(2) = 9e-17
 Identities = 28/55 (50%), Positives = 33/55 (60%)
 Frame = +3

Query: 222 PSMSTVVSMLSNENELPRPKEPGFFTERQHGPDXXXXXXXXXXCNELTVTLFAPR 386
           PSMSTVV ML +E+ELP+PKEPGFFT R  G             NE+T+T    R
Sbjct: 611 PSMSTVVMMLGSESELPQPKEPGFFTTRDVGKATSSSTQSKVSVNEITMTQLEAR 665


>ref|XP_002317550.1| predicted protein [Populus trichocarpa] gi|222860615|gb|EEE98162.1|
           predicted protein [Populus trichocarpa]
          Length = 775

 Score = 57.4 bits (137), Expect(2) = 9e-16
 Identities = 28/49 (57%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
 Frame = +2

Query: 2   LSHAWKLYTEGIFLELTDDAIV-NCNHFEVSRAIQIGLLCVQPYPKDRP 145
           L +AW+L+TEG   EL  ++IV +CN +E  R+IQIGLLCVQ  P+DRP
Sbjct: 673 LGYAWRLFTEGRSSELIAESIVESCNLYEALRSIQIGLLCVQRSPRDRP 721



 Score = 51.2 bits (121), Expect(2) = 9e-16
 Identities = 25/55 (45%), Positives = 32/55 (58%)
 Frame = +3

Query: 222 PSMSTVVSMLSNENELPRPKEPGFFTERQHGPDXXXXXXXXXXCNELTVTLFAPR 386
           PSMS+VV ML +E+ELP+PKEPGFF  +  G             NE+T+T    R
Sbjct: 721 PSMSSVVMMLGSESELPQPKEPGFFNTKDSGKASSSSIQSKISANEITMTQLEAR 775


>ref|XP_002528881.1| conserved hypothetical protein [Ricinus communis]
            gi|223531680|gb|EEF33505.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 2428

 Score = 56.6 bits (135), Expect(2) = 2e-15
 Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
 Frame = +2

Query: 11   AWKLYTEGIFLELTDDAIV-NCNHFEVSRAIQIGLLCVQPYPKDRP 145
            AWKL+ EG +LEL D  I+ +CN  EV R+IQ+GLLCVQ  P+DRP
Sbjct: 2328 AWKLFKEGRYLELIDALIMESCNLSEVLRSIQVGLLCVQHSPEDRP 2373



 Score = 51.2 bits (121), Expect(2) = 2e-15
 Identities = 28/56 (50%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
 Frame = +3

Query: 222  PSMSTVVSMLSNENELPRPKEPGFFTERQ-HGPDXXXXXXXXXXCNELTVTLFAPR 386
            PSMS+VV MLS E  LP PKEPGFFTER+    D           NE+T+T+   R
Sbjct: 2373 PSMSSVVLMLSGEGALPEPKEPGFFTERKLIKTDSSSSKYESCSINEVTITMIGAR 2428



 Score = 51.6 bits (122), Expect(2) = 7e-12
 Identities = 26/49 (53%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
 Frame = +2

Query: 2   LSHAWKLYTEGIFLELTDDAIVN-CNHFEVSRAIQIGLLCVQPYPKDRP 145
           L HAWKL+  G   EL   ++++ C   EV R+IQIGLLCVQ  P+DRP
Sbjct: 723 LGHAWKLHKAGRTFELIAASVIDSCYESEVLRSIQIGLLCVQRSPEDRP 771



 Score = 43.9 bits (102), Expect(2) = 7e-12
 Identities = 19/28 (67%), Positives = 22/28 (78%)
 Frame = +3

Query: 222 PSMSTVVSMLSNENELPRPKEPGFFTER 305
           PSMS VV ML +E  LP P++PGFFTER
Sbjct: 771 PSMSNVVLMLGSEGTLPEPRQPGFFTER 798



 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 27/49 (55%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
 Frame = +2

Query: 2    LSHAWKLYTEGIFLELTDDAIV-NCNHFEVSRAIQIGLLCVQPYPKDRP 145
            L HAW L+ EG +LEL D  I  +CN  EV R++ +GLLCVQ  P+DRP
Sbjct: 1541 LGHAWNLFKEGRYLELIDALIKESCNLSEVLRSVHVGLLCVQHAPEDRP 1589


>ref|XP_002317551.1| predicted protein [Populus trichocarpa] gi|222860616|gb|EEE98163.1|
           predicted protein [Populus trichocarpa]
          Length = 777

 Score = 62.8 bits (151), Expect(2) = 2e-15
 Identities = 32/49 (65%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
 Frame = +2

Query: 2   LSHAWKLYTEGIFLELTDDAIVN-CNHFEVSRAIQIGLLCVQPYPKDRP 145
           L HAWKL+ EG  LEL DD IV  CN  EV+R+I IGLLCVQ  P DRP
Sbjct: 674 LGHAWKLFKEGRALELVDDLIVETCNQNEVTRSIHIGLLCVQHSPGDRP 722



 Score = 44.7 bits (104), Expect(2) = 2e-15
 Identities = 28/57 (49%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
 Frame = +3

Query: 222 PSMSTVVSMLSNENELPRPKEPGFFTERQHGPDXXXXXXXXXXC--NELTVTLFAPR 386
           PSMSTVV ML  E  L +P EPGF+TER+   D          C  NE+TVTL   R
Sbjct: 722 PSMSTVVLMLGGEGTLAQPNEPGFYTERKL-IDASSSSSKQESCSVNEVTVTLIDAR 777


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