BLASTX nr result

ID: Panax21_contig00014720 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014720
         (598 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM62132.1| phloem protein 2-1 [Apium graveolens Dulce Group]       61   1e-07
gb|AAM62133.1| phloem protein 2-2 [Apium graveolens Dulce Group]       56   4e-06

>gb|AAM62132.1| phloem protein 2-1 [Apium graveolens Dulce Group]
          Length = 181

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 37/100 (37%), Positives = 51/100 (51%), Gaps = 3/100 (3%)
 Frame = -3

Query: 596 GEYSTEKLEVG-SYGVYFDVMLKDDFNIASPVKLTLALPDGSVQTDYKDLKSYSKNVRIW 420
           G+YS  KL  G  YGVYF V LK +  +   V L L  PDG       DL    KN  + 
Sbjct: 78  GKYSASKLNQGVKYGVYFIVKLKTNLRLNGKVTLKLTRPDGRTVVTRDDLDKRPKNTWVA 137

Query: 419 LKAGNFFN--KVMYGDIKFALSGTECETLKKGLVMCGVHI 306
           LK G F    +  + ++KF+++G +  + K GLV+ G  I
Sbjct: 138 LKVGEFMTNARTCHRNVKFSMNGCDGTSWKSGLVVIGAVI 177


>gb|AAM62133.1| phloem protein 2-2 [Apium graveolens Dulce Group]
          Length = 179

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 36/100 (36%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
 Frame = -3

Query: 596 GEYSTEKLEVG-SYGVYFDVMLKDDFNIASPVKLTLALPDGSVQTDYKDLKSYSKNVRIW 420
           G Y+   L  G  YGVYF V L  +  +  PV L L  P+GS +   +DL++  +N  + 
Sbjct: 75  GTYNARNLNKGVKYGVYFVVELNSNPCMNGPVTLKLTRPNGSPEEHKEDLQTKPRNKWVG 134

Query: 419 LKAGNFFNKVMYGD--IKFALSGTECETLKKGLVMCGVHI 306
           LK G F N     D  +KF+++G +  T K GL + G  I
Sbjct: 135 LKVGEFTNTASGCDNTVKFSMNGCDGTTWKTGLTVIGAAI 174


Top