BLASTX nr result

ID: Panax21_contig00014713 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014713
         (1264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315479.1| f-box family protein [Populus trichocarpa] g...   315   1e-83
ref|XP_002519349.1| conserved hypothetical protein [Ricinus comm...   306   7e-81
ref|NP_173075.3| F-box/kelch-repeat protein [Arabidopsis thalian...   291   3e-76
ref|XP_002890155.1| kelch repeat-containing F-box family protein...   289   9e-76
gb|AAD34677.1|AC006341_5 Contains two PF|01344 Kelch motif domai...   275   2e-71

>ref|XP_002315479.1| f-box family protein [Populus trichocarpa]
           gi|222864519|gb|EEF01650.1| f-box family protein
           [Populus trichocarpa]
          Length = 413

 Score =  315 bits (808), Expect = 1e-83
 Identities = 141/205 (68%), Positives = 173/205 (84%)
 Frame = +1

Query: 106 SV*LMESMNQAIIPGLPDDLALRCLAKLSHGYHGLLEAVSKDWRDLIRCSDYSNYKAREG 285
           S+  +ESM+Q IIPGLPDDLALRCLAK+SHGYHGLLE+VSK WRD+IR +DY+ Y+A++G
Sbjct: 4   SIDFLESMHQPIIPGLPDDLALRCLAKVSHGYHGLLESVSKRWRDMIRSADYARYRAKQG 63

Query: 286 WCGNWLFVLTEGSKNQWVAYDPEADKWHSLPKIPGNNSDSQHYGFSCVSIRNKFMVIGGS 465
            CG+WLFVLTE S NQWVA+DPEAD+WH LPK+ G+ +D QH+GFSCV + N+ +VIGGS
Sbjct: 64  CCGDWLFVLTEQSNNQWVAFDPEADRWHPLPKVSGDCADRQHFGFSCVCVYNRLLVIGGS 123

Query: 466 YAPQDPVFPHQRPFICNDVVQYDPFIKQWLSVASMRTPRSHFACTVVSGKVYVAGGRTSS 645
           YAP D     QRP I ++V+Q+DPF KQW SVA MRTPRSHFAC+V++GKVYVAGGR  S
Sbjct: 124 YAPLDSSVLIQRPLITDNVLQFDPFKKQWTSVARMRTPRSHFACSVIAGKVYVAGGRNLS 183

Query: 646 CVTGLAVGEVYDPVTDEWEDLPPMP 720
           C  GLA+ EVYDP+TD+WE+LPPMP
Sbjct: 184 CTKGLALAEVYDPLTDKWEELPPMP 208



 Score =  101 bits (251), Expect = 5e-19
 Identities = 45/58 (77%), Positives = 50/58 (86%)
 Frame = +3

Query: 876  VYNPSDRKWCTVDDIWPFSRAMQFAVQVMSDDRVYTVVDWGESSIKTRDTEKGEWHHV 1049
            V+NPS   WCT++DIWPFSRAMQFAVQVM D RVYTVVDWGES IKTRD+E GEW+ V
Sbjct: 240  VFNPSINTWCTMEDIWPFSRAMQFAVQVMCDGRVYTVVDWGESLIKTRDSEGGEWYTV 297


>ref|XP_002519349.1| conserved hypothetical protein [Ricinus communis]
           gi|223541664|gb|EEF43213.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 388

 Score =  306 bits (784), Expect = 7e-81
 Identities = 139/204 (68%), Positives = 164/204 (80%), Gaps = 4/204 (1%)
 Frame = +1

Query: 121 ESMNQAIIPGLPDDLALRCLAKLSHGYHGLLEAVSKDWRDLIRCSDYSNYKAREGWCGNW 300
           ES++Q IIPGLPDDLALRCLAKLSHG+HGLLE VSK WR+LIR  DY +YK+REGWCGNW
Sbjct: 7   ESIHQPIIPGLPDDLALRCLAKLSHGHHGLLETVSKRWRNLIRSLDYGHYKSREGWCGNW 66

Query: 301 LFVLTEGSKNQWVAYDPEADKWHSLPKIPGNNSDSQHYGFSCVSIRNKFMVIGGSYAPQD 480
           LFVLTE SKNQWVAYDPEAD+WH LP    + +  QH+GFSCV + N+ +VIGGSY P D
Sbjct: 67  LFVLTEQSKNQWVAYDPEADRWHPLPNSSEDYAGWQHFGFSCVCVSNRLLVIGGSYMPND 126

Query: 481 PVFPHQRPFICNDVVQYDPFIKQWLSVASMRTPRSHFACTVVSGKVYVAGGRTSSCVTGL 660
              PHQ+P I + V+Q+DPF K+W S+A MRTPRSHFAC+V+SGKVYVAGGR  SC  GL
Sbjct: 127 SSLPHQKPLITDQVLQFDPFKKEWKSMARMRTPRSHFACSVISGKVYVAGGRNLSCTRGL 186

Query: 661 AVGEVYDPVTD----EWEDLPPMP 720
           A+ EVYDP+ D     W++LPPMP
Sbjct: 187 ALAEVYDPLLDNRNCRWDELPPMP 210



 Score =  100 bits (250), Expect = 6e-19
 Identities = 44/60 (73%), Positives = 50/60 (83%)
 Frame = +3

Query: 870  SDVYNPSDRKWCTVDDIWPFSRAMQFAVQVMSDDRVYTVVDWGESSIKTRDTEKGEWHHV 1049
            S V+ PS   WC V DIWPFSRAMQF+VQVM D +VYTVVDWGES IKTRD+EKGEW++V
Sbjct: 240  SQVFEPSKESWCIVKDIWPFSRAMQFSVQVMGDGQVYTVVDWGESLIKTRDSEKGEWYNV 299


>ref|NP_173075.3| F-box/kelch-repeat protein [Arabidopsis thaliana]
           gi|122242689|sp|Q0WW40.1|FBK5_ARATH RecName:
           Full=F-box/kelch-repeat protein At1g16250
           gi|110741130|dbj|BAE98658.1| hypothetical protein
           [Arabidopsis thaliana] gi|119360151|gb|ABL66804.1|
           At1g16250 [Arabidopsis thaliana]
           gi|332191305|gb|AEE29426.1| F-box/kelch-repeat protein
           [Arabidopsis thaliana]
          Length = 383

 Score =  291 bits (744), Expect = 3e-76
 Identities = 133/201 (66%), Positives = 155/201 (77%)
 Frame = +1

Query: 118 MESMNQAIIPGLPDDLALRCLAKLSHGYHGLLEAVSKDWRDLIRCSDYSNYKAREGWCGN 297
           MES+ Q+IIPGLPDDLALRC+AKLSHGYHG+LE VS+ WRDL+R +DYS YKAR GW G+
Sbjct: 1   MESIEQSIIPGLPDDLALRCIAKLSHGYHGVLECVSRGWRDLVRGADYSCYKARNGWSGS 60

Query: 298 WLFVLTEGSKNQWVAYDPEADKWHSLPKIPGNNSDSQHYGFSCVSIRNKFMVIGGSYAPQ 477
           WLFVLTE SKNQWVAYDPEAD+WH LP+         H GF+CV + N  +VIGG YAP 
Sbjct: 61  WLFVLTERSKNQWVAYDPEADRWHPLPRTRAVQDGWHHSGFACVCVSNCLLVIGGCYAPS 120

Query: 478 DPVFPHQRPFICNDVVQYDPFIKQWLSVASMRTPRSHFACTVVSGKVYVAGGRTSSCVTG 657
              FPHQ+P +  DV+++DPF KQW  VASMRTPR+HFACT VSGKVYVAGGR  +   G
Sbjct: 121 VSSFPHQKPVVTKDVMRFDPFKKQWKMVASMRTPRTHFACTSVSGKVYVAGGRNLTHSRG 180

Query: 658 LAVGEVYDPVTDEWEDLPPMP 720
           +   EVYDPV D WE+LP MP
Sbjct: 181 IPSAEVYDPVADRWEELPAMP 201



 Score =  105 bits (262), Expect = 2e-20
 Identities = 44/61 (72%), Positives = 55/61 (90%)
 Frame = +3

Query: 867  TSDVYNPSDRKWCTVDDIWPFSRAMQFAVQVMSDDRVYTVVDWGESSIKTRDTEKGEWHH 1046
            +S+V+NP D  W TV+D+WPFSRAMQFAVQVM +DRVYT+VDWGES IKTRDT++GEW++
Sbjct: 230  SSEVFNPRDMTWSTVEDVWPFSRAMQFAVQVMKNDRVYTIVDWGESLIKTRDTDEGEWYN 289

Query: 1047 V 1049
            V
Sbjct: 290  V 290


>ref|XP_002890155.1| kelch repeat-containing F-box family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297335997|gb|EFH66414.1| kelch
           repeat-containing F-box family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 404

 Score =  289 bits (740), Expect = 9e-76
 Identities = 131/201 (65%), Positives = 154/201 (76%)
 Frame = +1

Query: 118 MESMNQAIIPGLPDDLALRCLAKLSHGYHGLLEAVSKDWRDLIRCSDYSNYKAREGWCGN 297
           MES+ Q+IIPGLPDDLALRC+AKLSHGYHG+LE VS+ WRDL+R  DYS+YKAR GW G+
Sbjct: 22  MESIEQSIIPGLPDDLALRCIAKLSHGYHGVLECVSRGWRDLVRSVDYSSYKARNGWSGS 81

Query: 298 WLFVLTEGSKNQWVAYDPEADKWHSLPKIPGNNSDSQHYGFSCVSIRNKFMVIGGSYAPQ 477
           WLFVLTE SKNQWVAYDP+AD+WH LP          H GF+CV + N  +VIGG YAP 
Sbjct: 82  WLFVLTERSKNQWVAYDPQADRWHPLPTTRAVQDGWHHSGFACVCVSNCLLVIGGCYAPS 141

Query: 478 DPVFPHQRPFICNDVVQYDPFIKQWLSVASMRTPRSHFACTVVSGKVYVAGGRTSSCVTG 657
              FPHQ+P +  DV+++DPF K+W  VASMRTPR+HFACT VSGKVYVAGGR  +   G
Sbjct: 142 VSSFPHQKPVVTKDVMRFDPFKKEWKMVASMRTPRTHFACTAVSGKVYVAGGRNLTHSRG 201

Query: 658 LAVGEVYDPVTDEWEDLPPMP 720
           +   EVYDPV D WE+LP MP
Sbjct: 202 IPSAEVYDPVADRWEELPAMP 222



 Score =  105 bits (262), Expect = 2e-20
 Identities = 44/61 (72%), Positives = 55/61 (90%)
 Frame = +3

Query: 867  TSDVYNPSDRKWCTVDDIWPFSRAMQFAVQVMSDDRVYTVVDWGESSIKTRDTEKGEWHH 1046
            +S+V+NP D  W TV+D+WPFSRAMQFAVQVM +DRVYT+VDWGES IKTRDT++GEW++
Sbjct: 251  SSEVFNPRDMTWSTVEDVWPFSRAMQFAVQVMKNDRVYTIVDWGESLIKTRDTDEGEWYN 310

Query: 1047 V 1049
            V
Sbjct: 311  V 311


>gb|AAD34677.1|AC006341_5 Contains two PF|01344 Kelch motif domains [Arabidopsis thaliana]
          Length = 439

 Score =  275 bits (702), Expect = 2e-71
 Identities = 125/190 (65%), Positives = 145/190 (76%)
 Frame = +1

Query: 151 LPDDLALRCLAKLSHGYHGLLEAVSKDWRDLIRCSDYSNYKAREGWCGNWLFVLTEGSKN 330
           LPDDLALRC+AKLSHGYHG+LE VS+ WRDL+R +DYS YKAR GW G+WLFVLTE SKN
Sbjct: 68  LPDDLALRCIAKLSHGYHGVLECVSRGWRDLVRGADYSCYKARNGWSGSWLFVLTERSKN 127

Query: 331 QWVAYDPEADKWHSLPKIPGNNSDSQHYGFSCVSIRNKFMVIGGSYAPQDPVFPHQRPFI 510
           QWVAYDPEAD+WH LP+         H GF+CV + N  +VIGG YAP    FPHQ+P +
Sbjct: 128 QWVAYDPEADRWHPLPRTRAVQDGWHHSGFACVCVSNCLLVIGGCYAPSVSSFPHQKPVV 187

Query: 511 CNDVVQYDPFIKQWLSVASMRTPRSHFACTVVSGKVYVAGGRTSSCVTGLAVGEVYDPVT 690
             DV+++DPF KQW  VASMRTPR+HFACT VSGKVYVAGGR  +   G+   EVYDPV 
Sbjct: 188 TKDVMRFDPFKKQWKMVASMRTPRTHFACTSVSGKVYVAGGRNLTHSRGIPSAEVYDPVA 247

Query: 691 DEWEDLPPMP 720
           D WE+LP MP
Sbjct: 248 DRWEELPAMP 257



 Score =  105 bits (262), Expect = 2e-20
 Identities = 44/61 (72%), Positives = 55/61 (90%)
 Frame = +3

Query: 867  TSDVYNPSDRKWCTVDDIWPFSRAMQFAVQVMSDDRVYTVVDWGESSIKTRDTEKGEWHH 1046
            +S+V+NP D  W TV+D+WPFSRAMQFAVQVM +DRVYT+VDWGES IKTRDT++GEW++
Sbjct: 286  SSEVFNPRDMTWSTVEDVWPFSRAMQFAVQVMKNDRVYTIVDWGESLIKTRDTDEGEWYN 345

Query: 1047 V 1049
            V
Sbjct: 346  V 346


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