BLASTX nr result

ID: Panax21_contig00014706 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014706
         (914 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306134.1| predicted protein [Populus trichocarpa] gi|2...   165   1e-38
ref|XP_002313012.1| predicted protein [Populus trichocarpa] gi|2...   154   2e-35
ref|XP_004148557.1| PREDICTED: zinc finger CCCH domain-containin...   121   2e-25
ref|XP_004164844.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ...   121   3e-25
ref|XP_003527615.1| PREDICTED: uncharacterized protein LOC100815...   110   5e-22

>ref|XP_002306134.1| predicted protein [Populus trichocarpa] gi|222849098|gb|EEE86645.1|
            predicted protein [Populus trichocarpa]
          Length = 657

 Score =  165 bits (418), Expect = 1e-38
 Identities = 104/272 (38%), Positives = 124/272 (45%), Gaps = 12/272 (4%)
 Frame = -1

Query: 887  WRPPISNNQSNMRPPAPLNLPWGMGIAENSASAQNIQPGNPNSGWVAMPVNPNMGWGGHV 708
            WR P+    SN++P  P + PWGMGI +N  +     P N N+ W  +P N NMGWG  +
Sbjct: 422  WRAPVPG-PSNIQPSVPSSGPWGMGITDNQGATPRQGPENQNTSWGPIPGNQNMGWGVSL 480

Query: 707  P-NPNMNWMASVQGAPPGNANPGWVLPTGNPGAGFQGAVLGNLNPGWVAPPANAGAIAQV 531
            P N N  W    Q    GN NPGW       GA  QG   GN NP W       GA  Q 
Sbjct: 481  PANSNQGWAVPGQVPSAGNVNPGW-------GAPVQGQAPGNANPAW------GGAPVQG 527

Query: 530  LGPMNANQGWVTPTTNMGPNAQGPVHGNGNQGWPAPTGNLGPNVQGPASGNANSGWVAPT 351
              P NA  GW       GP+ QGP   N N GW  P  + GP    P   NAN+ W  PT
Sbjct: 528  PAPGNAFSGW-------GPSGQGPAPTNANTGWVPP--SQGP----PPPPNANTNWSVPT 574

Query: 350  SGNTNPGWGSPAGSQGNRRNEDHHKGDKFSGQRDRGSQ-------RGMPWNKQXXXXXXX 192
             GN    WGS A   G+R        D+FS QRDRGS         G PWN+Q       
Sbjct: 575  -GNAGT-WGSDANQNGDR--------DRFSSQRDRGSHGGDSGYGGGKPWNRQSSFNRSR 624

Query: 191  XXXXXXGQ----CYMFQQNGHCKRGASCKFQH 108
                   +    C    ++GHCK+GASC + H
Sbjct: 625  DSPRPPFKGQRICKYHHEHGHCKKGASCDYMH 656


>ref|XP_002313012.1| predicted protein [Populus trichocarpa] gi|222849420|gb|EEE86967.1|
            predicted protein [Populus trichocarpa]
          Length = 746

 Score =  154 bits (390), Expect = 2e-35
 Identities = 96/272 (35%), Positives = 123/272 (45%), Gaps = 11/272 (4%)
 Frame = -1

Query: 887  WRPPISNNQSNMRPPAPLNLPWGMGIAENSASAQNIQPGNPNSGWVAMPVNPNMGWGGHV 708
            WR P+    SN++P AP + PWGMGI EN ++       N N+GW A+P N NMGWG  +
Sbjct: 515  WRAPVPG-PSNIQPSAPSSRPWGMGITENQSTTPRQGSENQNTGWGAIPGNQNMGWGVSL 573

Query: 707  P-NPNMNWMASVQGAPPGNANPGWVLPTGNPGAGFQGAVLGNLNPGWVAPPANAGAIAQV 531
            P N N  W+A  Q    GN  P WV P        QG   GN NPGW AP        Q 
Sbjct: 574  PANSNQCWVAPGQVPATGNVKPVWVAPV-------QGQAPGNANPGWGAP-------VQG 619

Query: 530  LGPMNANQGWVTPTTNMGPNAQGPVHGNGNQGWPAPTGNLGPNVQGPASGNANSGWVAPT 351
              P NA  GW       GP+ QG V  + N  W        P  QGP           P 
Sbjct: 620  QAPGNAFSGW-------GPSGQGSVPTSANTAWV-------PLSQGP-----------PP 654

Query: 350  SGNTNPGWGSPAGSQGNRRNEDHHKGDKFSGQRDRGSQ-------RGMPWNKQ---XXXX 201
             GN N  W  P G+ G   ++ +  GD+FS  ++RGS         G PWN+Q       
Sbjct: 655  PGNANTNWAVPTGNAGTWGSDMNQIGDRFSSPKERGSHGGDSGHGGGKPWNRQSSFGRSG 714

Query: 200  XXXXXXXXXGQCYMFQQNGHCKRGASCKFQHT 105
                      +   + ++GHCK+G+SC + HT
Sbjct: 715  DSPRPSFKGQRVCKYHEHGHCKKGSSCDYLHT 746


>ref|XP_004148557.1| PREDICTED: zinc finger CCCH domain-containing protein 19-like
            [Cucumis sativus]
          Length = 1470

 Score =  121 bits (304), Expect = 2e-25
 Identities = 89/286 (31%), Positives = 117/286 (40%), Gaps = 17/286 (5%)
 Frame = -1

Query: 914  VSSMPLPDAWRP--PISNNQSNMRPPAPLNLPWGMGIAENSASAQNIQPGNPNSGWVAMP 741
            +SS P  D WR   PIS+N  +++   P NLPWGMG  E  ++       + N  W  MP
Sbjct: 1237 MSSFPSSDPWRSTAPISSNPQHIQCSTPPNLPWGMGAPEGQSTVPRQGSESQNQTWGPMP 1296

Query: 740  V-NPNMGWGGHVPNPN---MNWMASVQGAPPGNANPGWVLPTGNPGAGFQGAVLGNLNPG 573
              NPNMGWG   P PN   M W A+ Q + P   NPGW+ P        QG   GN   G
Sbjct: 1297 SGNPNMGWGPTGPPPNATAMMWGATAQSSGPAATNPGWIAPG-------QGPAAGNNLQG 1349

Query: 572  WVA-----PPANA-----GAIAQVLGPMNANQGWVTPTTNMGPNAQGPVHG-NGNQGWPA 426
            W A     PP NA     G     + PMN N  W+ P+ N   N  G  HG NGN+    
Sbjct: 1350 WPAHSPMPPPVNATPGWVGPNVAPMPPMNMNPSWLVPSVNQ--NMWGNEHGKNGNRFSNQ 1407

Query: 425  PTGNLGPNVQGPASGNANSGWVAPTSGNTNPGWGSPAGSQGNRRNEDHHKGDKFSGQRDR 246
              G       G   GN +  W         P +G   G  GN R+               
Sbjct: 1408 KDG----GSHGGDPGNGDKSW------GMQPSFGGGGGGGGNSRS--------------- 1442

Query: 245  GSQRGMPWNKQXXXXXXXXXXXXXGQCYMFQQNGHCKRGASCKFQH 108
                  P+N+               +   + ++GHCK+G +C ++H
Sbjct: 1443 ------PYNR-------------VQKLCKYHESGHCKKGGTCDYRH 1469


>ref|XP_004164844.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
            protein 19-like [Cucumis sativus]
          Length = 1475

 Score =  121 bits (303), Expect = 3e-25
 Identities = 91/287 (31%), Positives = 120/287 (41%), Gaps = 18/287 (6%)
 Frame = -1

Query: 914  VSSMPLPDAWRP--PISNNQSNMRPPAPLNLPWGMGIAENSASAQNIQPGNPNSGWVAMP 741
            +SS P  D WR   PIS+N  +++   P NLPWGMG  E  ++       + N  W  MP
Sbjct: 1237 MSSFPSSDPWRSTAPISSNPQHIQCSTPPNLPWGMGAPEGQSTVPRQGSESQNQTWGPMP 1296

Query: 740  V-NPNMGWGGHVPNPN---MNWMASVQGAPPGNANPGWVLPTGNPGAGFQGAVLGNLNPG 573
              NPNMGWG   P PN   M W A+ Q + P   NPGW+ P        QG   GN   G
Sbjct: 1297 SGNPNMGWGPTGPPPNATAMMWGATAQSSGPAATNPGWIAPG-------QGPAAGNNLQG 1349

Query: 572  WVA-----PPANA-----GAIAQVLGPMNANQGWVTPTTNMGPNAQGPVHG-NGNQGWPA 426
            W A     PP NA     G     + PMN N  W+ P+ N   N  G  HG NGN+    
Sbjct: 1350 WPAHSPMPPPVNATPGWVGPNVAPMPPMNMNPSWLVPSVNQ--NMWGNEHGKNGNRFSNQ 1407

Query: 425  PTGNLGPNVQGPASGNANSGW-VAPTSGNTNPGWGSPAGSQGNRRNEDHHKGDKFSGQRD 249
              G       G   GN +  W + P+ G    G G   G  GN R+              
Sbjct: 1408 KDG----GSHGGDPGNGDKSWGMQPSFG--GGGGGGGGGGGGNSRS-------------- 1447

Query: 248  RGSQRGMPWNKQXXXXXXXXXXXXXGQCYMFQQNGHCKRGASCKFQH 108
                   P+N+               +   + ++GHCK+G +C ++H
Sbjct: 1448 -------PYNR-------------VQKLCKYHESGHCKKGGTCDYRH 1474


>ref|XP_003527615.1| PREDICTED: uncharacterized protein LOC100815079 [Glycine max]
          Length = 1421

 Score =  110 bits (275), Expect = 5e-22
 Identities = 81/280 (28%), Positives = 104/280 (37%), Gaps = 13/280 (4%)
 Frame = -1

Query: 905  MPLPDAWRPPISNNQSNMRPPAPLNLPWGMGIAENSASAQNIQPGNPNSGWVAMPVNPNM 726
            M  P+ WRPP S++QSN   P+P                                  PNM
Sbjct: 1218 MTAPEPWRPPASSSQSNTTAPSP--------------------------------AQPNM 1245

Query: 725  GWGGHVP-NPNMNWMASVQGAPPGNANPGWVLPTGNPGAGFQGAVLGNLNPGWVAPPANA 549
             WG  +P N NMNW                            G V  N+N  W+      
Sbjct: 1246 PWGMGMPGNQNMNW---------------------------GGVVPANMNVNWMP----- 1273

Query: 548  GAIAQVLGPMNANQGWVTPTTNMGPNAQGPVHGNGNQGWPAPTGNLGPNVQGPASGNANS 369
               AQV  P N+N GW  P+  + P+   P    G  GW  P        QG +  NAN+
Sbjct: 1274 ---AQVPAPGNSNPGWAAPSQGLPPSQGLPPVNAG--GWVGPG-------QGRSHVNANA 1321

Query: 368  GWVAP----TSGNTNPGWGSPAGSQGNRRNEDHHKGDKFSGQRDR--GSQRGMPWNKQXX 207
            GWV P      GN NPGW +P G+ G   +E  H GD+F  Q DR      G  WN+Q  
Sbjct: 1322 GWVGPGQGLAPGNANPGWAAPTGNPGMWGSEQSHNGDRFPNQGDRRDSGYGGKSWNRQSS 1381

Query: 206  XXXXXXXXXXXGQ------CYMFQQNGHCKRGASCKFQHT 105
                                  + ++G C++G SC F HT
Sbjct: 1382 FGSGGRGGSSRPPFGGQRGVCKYYESGRCRKGTSCDFLHT 1421


Top