BLASTX nr result
ID: Panax21_contig00014678
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00014678 (931 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003590703.1| Pre-mRNA-processing factor [Medicago truncat... 77 6e-12 ref|XP_002312609.1| predicted protein [Populus trichocarpa] gi|2... 76 1e-11 ref|XP_004155354.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-pro... 76 1e-11 ref|XP_004135243.1| PREDICTED: pre-mRNA-processing factor 17-lik... 76 1e-11 gb|ADN33838.1| pre-mRNA splicing factor [Cucumis melo subsp. melo] 76 1e-11 >ref|XP_003590703.1| Pre-mRNA-processing factor [Medicago truncatula] gi|355479751|gb|AES60954.1| Pre-mRNA-processing factor [Medicago truncatula] Length = 583 Score = 77.0 bits (188), Expect = 6e-12 Identities = 38/72 (52%), Positives = 44/72 (61%), Gaps = 5/72 (6%) Frame = +3 Query: 87 VARDVCQVNFSPEGWLVKSRDCEGKCWFYD*KDCKVF-----YPSSPLGCKWRPAEQGKV 251 VA CQVNFSP+G V S D EGKCWF+D K CKVF + +GC+W P EQ KV Sbjct: 512 VAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVTIGCEWHPLEQSKV 571 Query: 252 SCYRSDDLI*YW 287 + D LI YW Sbjct: 572 ATCGWDGLIKYW 583 >ref|XP_002312609.1| predicted protein [Populus trichocarpa] gi|222852429|gb|EEE89976.1| predicted protein [Populus trichocarpa] Length = 581 Score = 76.3 bits (186), Expect = 1e-11 Identities = 38/72 (52%), Positives = 44/72 (61%), Gaps = 5/72 (6%) Frame = +3 Query: 87 VARDVCQVNFSPEGWLVKSRDCEGKCWFYD*KDCKVF-----YPSSPLGCKWRPAEQGKV 251 VA CQVNFSP+G V S D EGKCWF+D K CKVF + +GC+W P EQ KV Sbjct: 509 VAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKV 568 Query: 252 SCYRSDDLI*YW 287 + D LI YW Sbjct: 569 ATCGWDGLIKYW 580 >ref|XP_004155354.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-processing factor 17-like [Cucumis sativus] Length = 580 Score = 75.9 bits (185), Expect = 1e-11 Identities = 38/72 (52%), Positives = 44/72 (61%), Gaps = 5/72 (6%) Frame = +3 Query: 87 VARDVCQVNFSPEGWLVKSRDCEGKCWFYD*KDCKVF-----YPSSPLGCKWRPAEQGKV 251 VA CQVNFSP+G V S D EGKCWF+D K CKVF + +GC+W P EQ KV Sbjct: 509 VAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKV 568 Query: 252 SCYRSDDLI*YW 287 + D LI YW Sbjct: 569 ATCGWDGLIKYW 580 >ref|XP_004135243.1| PREDICTED: pre-mRNA-processing factor 17-like [Cucumis sativus] Length = 580 Score = 75.9 bits (185), Expect = 1e-11 Identities = 38/72 (52%), Positives = 44/72 (61%), Gaps = 5/72 (6%) Frame = +3 Query: 87 VARDVCQVNFSPEGWLVKSRDCEGKCWFYD*KDCKVF-----YPSSPLGCKWRPAEQGKV 251 VA CQVNFSP+G V S D EGKCWF+D K CKVF + +GC+W P EQ KV Sbjct: 509 VAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKV 568 Query: 252 SCYRSDDLI*YW 287 + D LI YW Sbjct: 569 ATCGWDGLIKYW 580 >gb|ADN33838.1| pre-mRNA splicing factor [Cucumis melo subsp. melo] Length = 581 Score = 75.9 bits (185), Expect = 1e-11 Identities = 38/72 (52%), Positives = 44/72 (61%), Gaps = 5/72 (6%) Frame = +3 Query: 87 VARDVCQVNFSPEGWLVKSRDCEGKCWFYD*KDCKVF-----YPSSPLGCKWRPAEQGKV 251 VA CQVNFSP+G V S D EGKCWF+D K CKVF + +GC+W P EQ KV Sbjct: 509 VAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKV 568 Query: 252 SCYRSDDLI*YW 287 + D LI YW Sbjct: 569 ATCGWDGLIKYW 580