BLASTX nr result

ID: Panax21_contig00014668 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014668
         (708 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC44142.1| putative polyprotein [Cicer arietinum]                145   1e-32
gb|AAD22153.1|AF061282_6 polyprotein [Sorghum bicolor]                144   2e-32
gb|AAT38724.1| Putative retrotransposon protein, identical [Sola...   140   2e-31
gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum ...   140   2e-31
ref|YP_173356.1| hypothetical protein NitaMp008 [Nicotiana tabac...   140   3e-31

>emb|CAC44142.1| putative polyprotein [Cicer arietinum]
          Length = 655

 Score =  145 bits (365), Expect = 1e-32
 Identities = 77/192 (40%), Positives = 121/192 (63%), Gaps = 7/192 (3%)
 Frame = -3

Query: 589 RLWIPPVLELKEEILREAHSARYSIHPGSTKMYQNLR*YFWWPGMKKEVAEWVNKCLTCQ 410
           R+ +P +  +++ IL EAH ++ SIHPG+TKMYQ+LR  +WWPGMKK VAE+V+ CLTCQ
Sbjct: 316 RICVPEITAMRKTILEEAHKSKLSIHPGATKMYQDLRQNYWWPGMKKHVAEYVSTCLTCQ 375

Query: 409 RIKAKYQRPSGLLQLLTIPKWK*ENIIMNFVVGL-LT*KDFDAIWVIVG*RNMLISYQ*R 233
           + K ++QRP+G+LQ L IP+WK ++I M+F+ GL  T +  D+IWVIV        +   
Sbjct: 376 KAKVEHQRPAGMLQPLDIPEWKWDSISMDFITGLPKTRRKNDSIWVIVDRLTKSAHFL-- 433

Query: 232 *GLVWIS*RNSTLKRLFLVMVFRCQLCQTGIHT------SQLIFGSVQE*LGNQVK*STA 71
              V  + +   L  +++  + R     + I +      +   +G++ E LG +++ S+A
Sbjct: 434 --PVRTTYKVDQLTEIYIAEIVRLHGVPSSIVSDRDPKFTSHFWGALHEALGTKLRLSSA 491

Query: 70  YHPQTDGRNDGT 35
           YHPQTDG+ + T
Sbjct: 492 YHPQTDGQTERT 503


>gb|AAD22153.1|AF061282_6 polyprotein [Sorghum bicolor]
          Length = 1484

 Score =  144 bits (363), Expect = 2e-32
 Identities = 80/193 (41%), Positives = 119/193 (61%), Gaps = 7/193 (3%)
 Frame = -3

Query: 598  FEMRLWIPPVLELKEEILREAHSARYSIHPGSTKMYQNLR*YFWWPGMKKEVAEWVNKCL 419
            F  R+ +P V  +++ ILREAH + YSIHPGSTKMY +LR  +WW G+K++VAE+V  C 
Sbjct: 1049 FGKRICVPEVKAIRDTILREAHESAYSIHPGSTKMYLDLRQKYWWYGLKRDVAEYVALCD 1108

Query: 418  TCQRIKAKYQRPSGLLQLLTIPKWK*ENIIMNFVVGL-LT*KDFDAIWVIVG*RNMLISY 242
            TCQR+KA++QRP+GLLQ + IP+WK E + M+F+VGL  T + +D+IWVIV     +  +
Sbjct: 1109 TCQRVKAEHQRPAGLLQPMKIPEWKWEEVGMDFIVGLPRTQRGYDSIWVIVDRLTKVAHF 1168

Query: 241  Q*R*GLVWIS*RNSTLKRLFLVMVF------RCQLCQTGIHTSQLIFGSVQE*LGNQVK* 80
                  V  S     L  L++  +       +  +   G   +   + +V + LG ++  
Sbjct: 1169 I----PVKTSYSGDRLAELYMERIVCLHGVPKKIVSDRGTQFTSHFWKAVHDSLGTKLNF 1224

Query: 79   STAYHPQTDGRND 41
            STAYHPQTDG+ +
Sbjct: 1225 STAYHPQTDGQTE 1237


>gb|AAT38724.1| Putative retrotransposon protein, identical [Solanum demissum]
          Length = 1602

 Score =  140 bits (354), Expect = 2e-31
 Identities = 77/196 (39%), Positives = 119/196 (60%), Gaps = 7/196 (3%)
 Frame = -3

Query: 598  FEMRLWIPPVLELKEEILREAHSARYSIHPGSTKMYQNLR*YFWWPGMKKEVAEWVNKCL 419
            ++ RL +P V  L+E ++ EAHS+RYS+HPGSTKMY++LR ++WW GMKK +AE+V KC 
Sbjct: 1161 YQGRLCVPMVDGLQERVMEEAHSSRYSVHPGSTKMYRDLREFYWWNGMKKGIAEFVAKCP 1220

Query: 418  TCQRIKAKYQRPSGLLQLLTIPKWK*ENIIMNFVVGL-LT*KDFDAIWVIVG*RNMLISY 242
             CQ++K ++QRP GL Q + +P+WK E I M+F+ GL  + +  D+IWVIV        +
Sbjct: 1221 NCQQVKVEHQRPGGLAQNIELPEWKWEMINMDFITGLPRSRRQHDSIWVIVDRMTKSAHF 1280

Query: 241  Q*R*GLVWIS*RNSTLKRLFLVMVFRCQ------LCQTGIHTSQLIFGSVQE*LGNQVK* 80
                  V  +       +L++  + R        +   G   +   + S Q+ LG++V  
Sbjct: 1281 L----PVKTTHSAEDYAKLYIQEIVRLHGVPISIISDRGAQFTAQFWKSFQKGLGSKVSL 1336

Query: 79   STAYHPQTDGRNDGTM 32
            STA+HPQTDG+ + T+
Sbjct: 1337 STAFHPQTDGQAERTI 1352


>gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1515

 Score =  140 bits (354), Expect = 2e-31
 Identities = 77/196 (39%), Positives = 119/196 (60%), Gaps = 7/196 (3%)
 Frame = -3

Query: 598  FEMRLWIPPVLELKEEILREAHSARYSIHPGSTKMYQNLR*YFWWPGMKKEVAEWVNKCL 419
            ++ RL +P V  L+E ++ EAHS+RYS+HPGSTKMY++LR ++WW GMKK +AE+V KC 
Sbjct: 1155 YQGRLCVPMVDGLQERVMEEAHSSRYSVHPGSTKMYRDLREFYWWNGMKKGIAEFVAKCP 1214

Query: 418  TCQRIKAKYQRPSGLLQLLTIPKWK*ENIIMNFVVGL-LT*KDFDAIWVIVG*RNMLISY 242
             CQ++K ++QRP GL Q + +P+WK E I M+F+ GL  + +  D+IWVIV        +
Sbjct: 1215 NCQQVKVEHQRPGGLAQNIELPEWKWEMINMDFITGLPRSRRQHDSIWVIVDRMTKSAHF 1274

Query: 241  Q*R*GLVWIS*RNSTLKRLFLVMVFRCQ------LCQTGIHTSQLIFGSVQE*LGNQVK* 80
                  V  +       +L++  + R        +   G   +   + S Q+ LG++V  
Sbjct: 1275 L----PVRTTHSAEDYAKLYIQEIVRLHGVPISIISDRGAQFTAQFWKSFQKGLGSKVSL 1330

Query: 79   STAYHPQTDGRNDGTM 32
            STA+HPQTDG+ + T+
Sbjct: 1331 STAFHPQTDGQAERTI 1346


>ref|YP_173356.1| hypothetical protein NitaMp008 [Nicotiana tabacum]
           gi|56806518|dbj|BAD83419.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 215

 Score =  140 bits (352), Expect = 3e-31
 Identities = 81/199 (40%), Positives = 124/199 (62%), Gaps = 9/199 (4%)
 Frame = -3

Query: 601 LFEMRLWIPPVLELKEEILREAHSARYSIHPGSTKMYQNLR*YFWWPGMKKEVAEWVNKC 422
           LF  R+ +P   +L  +IL EAHS+ + +HPGSTKMY+ +R ++WW GMK++VAE+V KC
Sbjct: 15  LFRGRVCVPQDSDLCHDILEEAHSSPFFLHPGSTKMYRTIRPHYWWKGMKRDVAEYVAKC 74

Query: 421 LTCQRIKAKYQRPSGLLQLLTIPKWK*ENIIMNFVVGL-LT*KDFDAIWVIVG*RNMLIS 245
           L CQ +KA++QRP+G LQ + IP+WK + I M+FV GL  T +  DAIWVI+        
Sbjct: 75  LVCQLVKAEHQRPAGPLQPVQIPQWKWDEIAMDFVSGLPKTARQHDAIWVIIDRLTKSAH 134

Query: 244 YQ*R*GLVWIS*RNST--LKRLFLVMVFRCQLCQTGI------HTSQLIFGSVQE*LGNQ 89
           +      + IS   ST  L ++++  + R     + I        +  ++ S+Q+ LG++
Sbjct: 135 F------LPISMTYSTGKLAQIYIDEIVRLHGIPSSIVSDRDPRFTSALWQSLQKALGSR 188

Query: 88  VK*STAYHPQTDGRNDGTM 32
           V  STA+HPQTDG++  T+
Sbjct: 189 VSLSTAFHPQTDGQSKRTI 207


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