BLASTX nr result

ID: Panax21_contig00014663 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014663
         (1034 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [...   643   0.0  
ref|XP_002512565.1| FACT complex subunit SPT16, putative [Ricinu...   613   e-173
ref|XP_002280582.1| PREDICTED: FACT complex subunit SPT16-like [...   613   e-173
ref|XP_002330007.1| global transcription factor group [Populus t...   613   e-173
emb|CAN64798.1| hypothetical protein VITISV_017317 [Vitis vinifera]   613   e-173

>ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [Vitis vinifera]
          Length = 1071

 Score =  643 bits (1659), Expect = 0.0
 Identities = 312/344 (90%), Positives = 330/344 (95%)
 Frame = -3

Query: 1032 PRHSSEVVQIIKTLRRQYASRESERAERATLVTQEKLQLAGAKFKPIRLSDLWIRPVFGG 853
            PRH SEVVQ+IKTLRRQ ASRESERAERATLVTQEKLQLAG +FKPIRLSDLWIRP FGG
Sbjct: 633  PRHISEVVQMIKTLRRQVASRESERAERATLVTQEKLQLAGTRFKPIRLSDLWIRPSFGG 692

Query: 852  RGRKLTGTLEAHSNGFRYSTSRPDERVDVMYANIKHAFFQPAEKEMITLLHFHLHNHIMV 673
            RGRKLTG+LE+H+NGFRYSTSRPDERVD+MY NIKHAFFQPAEKEMITLLHFHLHNHIMV
Sbjct: 693  RGRKLTGSLESHTNGFRYSTSRPDERVDIMYGNIKHAFFQPAEKEMITLLHFHLHNHIMV 752

Query: 672  GNKKTKDVQFYCEVMDVVQTIGGGKRSAYDPDEIEEEQRERARKNKINMDFQNFVNRVND 493
            GNKKTKDVQF+ EVMDVVQT+GGGKRSAYDPDEIEEEQRER RKNKINMDFQNFVNRVND
Sbjct: 753  GNKKTKDVQFFVEVMDVVQTLGGGKRSAYDPDEIEEEQRERDRKNKINMDFQNFVNRVND 812

Query: 492  LWGQPQFKSLDLEFDQPLRELGFHGVPHKSSAFIVPTSSCLVELVETPFLVISLSEIEIV 313
            LWGQPQFK LDLEFDQPLRELGFHGVPHK+SAFIVPTSSCLVEL+ETPFLVI+LSEIEIV
Sbjct: 813  LWGQPQFKGLDLEFDQPLRELGFHGVPHKASAFIVPTSSCLVELIETPFLVITLSEIEIV 872

Query: 312  NLERVGLGQKNFDMAIVFKDFKLDVFRIDSIPSSSLDGIKEWLDTTDIKYYESRLNMNWK 133
            NLERVGLGQKNFDM IVFKDFK DV RIDSIPS+SLDGIKEWLDTTD+KYYESRLN+NW+
Sbjct: 873  NLERVGLGQKNFDMTIVFKDFKRDVLRIDSIPSTSLDGIKEWLDTTDLKYYESRLNLNWR 932

Query: 132  TILKTITDDPEHFIQEGGWEFLNLEVSDSDSENLQESDQGYEPS 1
             ILKTIT+DPE FI++GGWEFLNLEVSDSDSEN QESDQGYEPS
Sbjct: 933  PILKTITEDPEKFIEDGGWEFLNLEVSDSDSENSQESDQGYEPS 976


>ref|XP_002512565.1| FACT complex subunit SPT16, putative [Ricinus communis]
            gi|223548526|gb|EEF50017.1| FACT complex subunit SPT16,
            putative [Ricinus communis]
          Length = 1098

 Score =  613 bits (1582), Expect = e-173
 Identities = 296/343 (86%), Positives = 320/343 (93%)
 Frame = -3

Query: 1029 RHSSEVVQIIKTLRRQYASRESERAERATLVTQEKLQLAGAKFKPIRLSDLWIRPVFGGR 850
            RH SEVVQ IKTLRRQ  SRESERAERATLVTQEKLQLA  KFKPI+L DLWIRPVFGGR
Sbjct: 631  RHISEVVQQIKTLRRQVTSRESERAERATLVTQEKLQLASTKFKPIKLYDLWIRPVFGGR 690

Query: 849  GRKLTGTLEAHSNGFRYSTSRPDERVDVMYANIKHAFFQPAEKEMITLLHFHLHNHIMVG 670
            GRKLTG+LEAH NG RYSTSRPDER+DVMY+NIKHAFFQPA+KEMITLLHFHLHNHIMVG
Sbjct: 691  GRKLTGSLEAHVNGLRYSTSRPDERIDVMYSNIKHAFFQPADKEMITLLHFHLHNHIMVG 750

Query: 669  NKKTKDVQFYCEVMDVVQTIGGGKRSAYDPDEIEEEQRERARKNKINMDFQNFVNRVNDL 490
            NKKTKDVQF+ EVMD+VQT+GGGKRSAYDPDEIEEEQRER RKNKINMDFQNFVNRVND+
Sbjct: 751  NKKTKDVQFFIEVMDIVQTLGGGKRSAYDPDEIEEEQRERDRKNKINMDFQNFVNRVNDV 810

Query: 489  WGQPQFKSLDLEFDQPLRELGFHGVPHKSSAFIVPTSSCLVELVETPFLVISLSEIEIVN 310
            WGQPQF+ LDLEFDQPLRELGFHGVPHK+SAFIVPTSSCLVEL+ETP +VI+LSEIEIVN
Sbjct: 811  WGQPQFRGLDLEFDQPLRELGFHGVPHKASAFIVPTSSCLVELIETPVVVITLSEIEIVN 870

Query: 309  LERVGLGQKNFDMAIVFKDFKLDVFRIDSIPSSSLDGIKEWLDTTDIKYYESRLNMNWKT 130
            LER+GLGQKNFDM IVFKDFK DV RIDSIPS+SLD IKEWL+TTD+KYYESRLN+NW+ 
Sbjct: 871  LERIGLGQKNFDMTIVFKDFKRDVLRIDSIPSTSLDSIKEWLNTTDLKYYESRLNLNWRP 930

Query: 129  ILKTITDDPEHFIQEGGWEFLNLEVSDSDSENLQESDQGYEPS 1
            ILKTITDDPE FI++GGWEFLN+EVSDSDSEN  +SD GY PS
Sbjct: 931  ILKTITDDPEKFIEDGGWEFLNMEVSDSDSENSADSDHGYVPS 973


>ref|XP_002280582.1| PREDICTED: FACT complex subunit SPT16-like [Vitis vinifera]
          Length = 1083

 Score =  613 bits (1581), Expect = e-173
 Identities = 297/344 (86%), Positives = 318/344 (92%)
 Frame = -3

Query: 1032 PRHSSEVVQIIKTLRRQYASRESERAERATLVTQEKLQLAGAKFKPIRLSDLWIRPVFGG 853
            PRH SEVVQ IKTLRRQ  +RESERAERATLVTQEKLQLAG KFKPI+L  LWIRP FGG
Sbjct: 628  PRHISEVVQGIKTLRRQVVARESERAERATLVTQEKLQLAGNKFKPIKLFGLWIRPPFGG 687

Query: 852  RGRKLTGTLEAHSNGFRYSTSRPDERVDVMYANIKHAFFQPAEKEMITLLHFHLHNHIMV 673
            RGRKL+GTLEAH NGFRYSTSRPDERVD+MY NIKHAFFQP E EMITL+HFHLHNHIMV
Sbjct: 688  RGRKLSGTLEAHVNGFRYSTSRPDERVDIMYGNIKHAFFQPVENEMITLIHFHLHNHIMV 747

Query: 672  GNKKTKDVQFYCEVMDVVQTIGGGKRSAYDPDEIEEEQRERARKNKINMDFQNFVNRVND 493
            G KKTKDVQFY EVMDVVQT+G GKRSAYDPDEIEEEQRER RKNK+NMDFQ+FVNRVND
Sbjct: 748  GTKKTKDVQFYVEVMDVVQTLGSGKRSAYDPDEIEEEQRERDRKNKVNMDFQSFVNRVND 807

Query: 492  LWGQPQFKSLDLEFDQPLRELGFHGVPHKSSAFIVPTSSCLVELVETPFLVISLSEIEIV 313
            LWGQPQF  LDLEFDQPLRELGFHGVP+KSSAFIVPTSSCLVEL+ETPFLVI+L+EIEIV
Sbjct: 808  LWGQPQFSGLDLEFDQPLRELGFHGVPYKSSAFIVPTSSCLVELIETPFLVITLAEIEIV 867

Query: 312  NLERVGLGQKNFDMAIVFKDFKLDVFRIDSIPSSSLDGIKEWLDTTDIKYYESRLNMNWK 133
            NLERVGLGQKNFDM IVFKDFK DV RIDSIPS+S+DGIKEWLDTTDIKYYESRLN+NW+
Sbjct: 868  NLERVGLGQKNFDMTIVFKDFKRDVLRIDSIPSTSIDGIKEWLDTTDIKYYESRLNLNWR 927

Query: 132  TILKTITDDPEHFIQEGGWEFLNLEVSDSDSENLQESDQGYEPS 1
             ILKTITDDP+ FI +GGWEFLN+E SDSDSE+ +ESDQGYEPS
Sbjct: 928  QILKTITDDPQSFIDDGGWEFLNMEASDSDSEHSEESDQGYEPS 971


>ref|XP_002330007.1| global transcription factor group [Populus trichocarpa]
            gi|222871432|gb|EEF08563.1| global transcription factor
            group [Populus trichocarpa]
          Length = 1065

 Score =  613 bits (1581), Expect = e-173
 Identities = 297/344 (86%), Positives = 320/344 (93%)
 Frame = -3

Query: 1032 PRHSSEVVQIIKTLRRQYASRESERAERATLVTQEKLQLAGAKFKPIRLSDLWIRPVFGG 853
            PRH SEVVQ+IKTLRR   +RESERAERATLV QEKLQLAG +FKPIRL+DLWIRPVFGG
Sbjct: 629  PRHISEVVQLIKTLRRHVMARESERAERATLVMQEKLQLAGNRFKPIRLTDLWIRPVFGG 688

Query: 852  RGRKLTGTLEAHSNGFRYSTSRPDERVDVMYANIKHAFFQPAEKEMITLLHFHLHNHIMV 673
            RGRKL G+LEAH NGFRYSTSR +ERVD+M+ANIKHAFFQPAEKEMITLLHFHLHNHIMV
Sbjct: 689  RGRKLPGSLEAHVNGFRYSTSRAEERVDIMFANIKHAFFQPAEKEMITLLHFHLHNHIMV 748

Query: 672  GNKKTKDVQFYCEVMDVVQTIGGGKRSAYDPDEIEEEQRERARKNKINMDFQNFVNRVND 493
            GNKKTKDVQFY EVMDVVQT+GGGKRSAYDPDEIEEEQRER RKNKINMDFQ+FVNRVND
Sbjct: 749  GNKKTKDVQFYVEVMDVVQTLGGGKRSAYDPDEIEEEQRERERKNKINMDFQSFVNRVND 808

Query: 492  LWGQPQFKSLDLEFDQPLRELGFHGVPHKSSAFIVPTSSCLVELVETPFLVISLSEIEIV 313
            LW QPQF  LDLEFDQPLRELGFHGVPHK ++FIVPTSSCLVELVETPFLV++LSEIEIV
Sbjct: 809  LWAQPQFSGLDLEFDQPLRELGFHGVPHKVTSFIVPTSSCLVELVETPFLVVTLSEIEIV 868

Query: 312  NLERVGLGQKNFDMAIVFKDFKLDVFRIDSIPSSSLDGIKEWLDTTDIKYYESRLNMNWK 133
            NLERVGLGQKNFDM IVFKDFK DV RIDSIPS++LDGIKEWLDTTDIKYYESRLN+NW+
Sbjct: 869  NLERVGLGQKNFDMTIVFKDFKRDVLRIDSIPSTALDGIKEWLDTTDIKYYESRLNLNWR 928

Query: 132  TILKTITDDPEHFIQEGGWEFLNLEVSDSDSENLQESDQGYEPS 1
             ILKTITDDP+ FI +GGWEFLNLE SDSDS+N ++SDQGY PS
Sbjct: 929  QILKTITDDPQSFIDDGGWEFLNLEASDSDSDNSEDSDQGYIPS 972


>emb|CAN64798.1| hypothetical protein VITISV_017317 [Vitis vinifera]
          Length = 1083

 Score =  613 bits (1581), Expect = e-173
 Identities = 297/344 (86%), Positives = 318/344 (92%)
 Frame = -3

Query: 1032 PRHSSEVVQIIKTLRRQYASRESERAERATLVTQEKLQLAGAKFKPIRLSDLWIRPVFGG 853
            PRH SEVVQ IKTLRRQ  +RESERAERATLVTQEKLQLAG KFKPI+L  LWIRP FGG
Sbjct: 628  PRHISEVVQGIKTLRRQVVARESERAERATLVTQEKLQLAGNKFKPIKLFGLWIRPPFGG 687

Query: 852  RGRKLTGTLEAHSNGFRYSTSRPDERVDVMYANIKHAFFQPAEKEMITLLHFHLHNHIMV 673
            RGRKL+GTLEAH NGFRYSTSRPDERVD+MY NIKHAFFQP E EMITL+HFHLHNHIMV
Sbjct: 688  RGRKLSGTLEAHVNGFRYSTSRPDERVDIMYGNIKHAFFQPVENEMITLIHFHLHNHIMV 747

Query: 672  GNKKTKDVQFYCEVMDVVQTIGGGKRSAYDPDEIEEEQRERARKNKINMDFQNFVNRVND 493
            G KKTKDVQFY EVMDVVQT+G GKRSAYDPDEIEEEQRER RKNK+NMDFQ+FVNRVND
Sbjct: 748  GTKKTKDVQFYVEVMDVVQTLGSGKRSAYDPDEIEEEQRERDRKNKVNMDFQSFVNRVND 807

Query: 492  LWGQPQFKSLDLEFDQPLRELGFHGVPHKSSAFIVPTSSCLVELVETPFLVISLSEIEIV 313
            LWGQPQF  LDLEFDQPLRELGFHGVP+KSSAFIVPTSSCLVEL+ETPFLVI+L+EIEIV
Sbjct: 808  LWGQPQFSGLDLEFDQPLRELGFHGVPYKSSAFIVPTSSCLVELIETPFLVITLAEIEIV 867

Query: 312  NLERVGLGQKNFDMAIVFKDFKLDVFRIDSIPSSSLDGIKEWLDTTDIKYYESRLNMNWK 133
            NLERVGLGQKNFDM IVFKDFK DV RIDSIPS+S+DGIKEWLDTTDIKYYESRLN+NW+
Sbjct: 868  NLERVGLGQKNFDMTIVFKDFKRDVLRIDSIPSTSIDGIKEWLDTTDIKYYESRLNLNWR 927

Query: 132  TILKTITDDPEHFIQEGGWEFLNLEVSDSDSENLQESDQGYEPS 1
             ILKTITDDP+ FI +GGWEFLN+E SDSDSE+ +ESDQGYEPS
Sbjct: 928  QILKTITDDPQSFIDDGGWEFLNMEASDSDSEHSEESDQGYEPS 971


Top