BLASTX nr result

ID: Panax21_contig00014642 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014642
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW71299.1| hypothetical protein ZEAMMB73_862197 [Zea mays]         71   8e-11
gb|AFW77494.1| hypothetical protein ZEAMMB73_824761 [Zea mays]         70   2e-10
ref|XP_002450590.1| hypothetical protein SORBIDRAFT_05g007530 [S...    67   2e-09
ref|XP_002457467.1| hypothetical protein SORBIDRAFT_03g007660 [S...    67   2e-09
ref|XP_002462608.1| hypothetical protein SORBIDRAFT_02g028945 [S...    67   2e-09

>gb|AFW71299.1| hypothetical protein ZEAMMB73_862197 [Zea mays]
          Length = 549

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 49/106 (46%), Positives = 61/106 (57%), Gaps = 14/106 (13%)
 Frame = +3

Query: 6   TRLNNLVYVQFNARXXXXXXXXXXXXXXXXL-ASDASKAQGWIVEGGDD----------- 149
           TRLN LVY+QFN R                L +SD ++AQG++ EGGDD           
Sbjct: 431 TRLNKLVYIQFNNRLMNNREKIRSKKITDVLLSSDTTEAQGFLQEGGDDCAQVVFRDGEE 490

Query: 150 -EVEGCTGLTWETIGEASGADSVLEPRRSSRNVGVRELHE-EDFLS 281
            E+EG TG+ W  IGEA GA+  LEPRRS+R   VREL+E E+F S
Sbjct: 491 DEMEG-TGIPWSVIGEAVGAEEQLEPRRSAR---VRELYEGEEFES 532


>gb|AFW77494.1| hypothetical protein ZEAMMB73_824761 [Zea mays]
          Length = 760

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 48/106 (45%), Positives = 61/106 (57%), Gaps = 14/106 (13%)
 Frame = +3

Query: 6   TRLNNLVYVQFNARXXXXXXXXXXXXXXXXL-ASDASKAQGWIVEGGDD----------- 149
           TRLN LVY+QFN R                L +SD ++AQG++ +GGDD           
Sbjct: 642 TRLNKLVYIQFNNRLMNNREKIKSKKITDVLLSSDTTEAQGFLQDGGDDCAQVVFRDEEE 701

Query: 150 -EVEGCTGLTWETIGEASGADSVLEPRRSSRNVGVRELHE-EDFLS 281
            E+EG TG+ W  IGEA GA+  LEPRRS+R   VREL+E E+F S
Sbjct: 702 DEMEG-TGIPWSVIGEAVGAEEQLEPRRSAR---VRELYEGEEFES 743


>ref|XP_002450590.1| hypothetical protein SORBIDRAFT_05g007530 [Sorghum bicolor]
           gi|241936433|gb|EES09578.1| hypothetical protein
           SORBIDRAFT_05g007530 [Sorghum bicolor]
          Length = 361

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 47/105 (44%), Positives = 59/105 (56%), Gaps = 14/105 (13%)
 Frame = +3

Query: 9   RLNNLVYVQFNARXXXXXXXXXXXXXXXXL-ASDASKAQGWIVEGGDD------------ 149
           RLN LVY+QFN++                L +SD  +AQG++ EGGDD            
Sbjct: 244 RLNKLVYIQFNSKLLSKREKIKSKKIIDVLLSSDTCEAQGFLQEGGDDCALVEFRDGEED 303

Query: 150 EVEGCTGLTWETIGEASGADSVLEPRRSSRNVGVRELHE-EDFLS 281
           E+EG TG+ W  IGEA GAD  LE RRS+R   VREL+E E+F S
Sbjct: 304 EMEG-TGIPWSVIGEAVGADEQLERRRSAR---VRELYEGEEFES 344


>ref|XP_002457467.1| hypothetical protein SORBIDRAFT_03g007660 [Sorghum bicolor]
           gi|241929442|gb|EES02587.1| hypothetical protein
           SORBIDRAFT_03g007660 [Sorghum bicolor]
          Length = 361

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 47/105 (44%), Positives = 59/105 (56%), Gaps = 14/105 (13%)
 Frame = +3

Query: 9   RLNNLVYVQFNARXXXXXXXXXXXXXXXXL-ASDASKAQGWIVEGGDD------------ 149
           RLN LVY+QFN++                L +SD  +AQG++ EGGDD            
Sbjct: 244 RLNKLVYIQFNSKLLSKKEKIKSKKIIDVLLSSDTCEAQGFLQEGGDDCALVEFRDGEED 303

Query: 150 EVEGCTGLTWETIGEASGADSVLEPRRSSRNVGVRELHE-EDFLS 281
           E+EG TG+ W  IGEA GAD  LE RRS+R   VREL+E E+F S
Sbjct: 304 EMEG-TGIPWSVIGEAVGADEQLERRRSAR---VRELYEGEEFES 344


>ref|XP_002462608.1| hypothetical protein SORBIDRAFT_02g028945 [Sorghum bicolor]
           gi|241925985|gb|EER99129.1| hypothetical protein
           SORBIDRAFT_02g028945 [Sorghum bicolor]
          Length = 141

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 47/105 (44%), Positives = 59/105 (56%), Gaps = 14/105 (13%)
 Frame = +3

Query: 9   RLNNLVYVQFNARXXXXXXXXXXXXXXXXL-ASDASKAQGWIVEGGDD------------ 149
           RLN LVY+QFN++                L +SD  +AQG++ EGGDD            
Sbjct: 24  RLNKLVYIQFNSKLLSKREKIKSKKIIDVLLSSDTCEAQGFLQEGGDDCALVEFRDGEED 83

Query: 150 EVEGCTGLTWETIGEASGADSVLEPRRSSRNVGVRELHE-EDFLS 281
           E+EG TG+ W  IGEA GAD  LE RRS+R   VREL+E E+F S
Sbjct: 84  EMEG-TGIPWSVIGEAVGADEQLERRRSAR---VRELYEGEEFES 124


Top