BLASTX nr result

ID: Panax21_contig00014608 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014608
         (959 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530175.1| PREDICTED: CCR4-NOT transcription complex su...   488   e-136
ref|XP_004134286.1| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT tra...   481   e-133
ref|XP_002301259.1| predicted protein [Populus trichocarpa] gi|2...   478   e-133
emb|CBI16596.3| unnamed protein product [Vitis vinifera]              457   e-126
emb|CBI24630.3| unnamed protein product [Vitis vinifera]              449   e-124

>ref|XP_003530175.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Glycine
            max]
          Length = 2424

 Score =  488 bits (1256), Expect = e-136
 Identities = 251/323 (77%), Positives = 271/323 (83%), Gaps = 4/323 (1%)
 Frame = +3

Query: 3    YENCKVLLGSELIKSSSEERSLLKNLGSWLGKITIGRNQVLRAREIDPKSLIMEAYEKGL 182
            YENCKVLLGSELIKSSSEERSLLKNLGSWLGK+TIGRNQVLRAREIDPKSLIMEAYEKGL
Sbjct: 1063 YENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQVLRAREIDPKSLIMEAYEKGL 1122

Query: 183  MIAVIPFTSKVLEPCHNSLAYQPPNPWTMGILGLLTEIYAMPNLKMNLKFDIEVLFKNLV 362
            MIAVIPFTSKVLEPC +SLAYQPPNPWTMGILGLL EIY+MPNLKMNLKFDIEVLFKNL 
Sbjct: 1123 MIAVIPFTSKVLEPCQSSLAYQPPNPWTMGILGLLAEIYSMPNLKMNLKFDIEVLFKNLC 1182

Query: 363  VDMKDVTPTSLLKDRVREVEGNPDFSNKDVASSQPQIVGEVKSGMVSTLNQVELPLDVAN 542
            VDMKDVTPTSLLKDR RE+EGNPDFSNKDV +SQ QI+ ++KSG+V  +NQVELPL+V N
Sbjct: 1183 VDMKDVTPTSLLKDRKREIEGNPDFSNKDVGASQSQIITDIKSGLVPPVNQVELPLEVTN 1242

Query: 543  PSHPSGHSRLLSQY-APLHLSSATLMEDEKLAALGLSDQLPSAQGLLQGQ---SPFSVSQ 710
            PS+   H  +LSQY  PLH+SS  LMEDEK+  LGLSDQLPSAQGLLQ     +PFS+SQ
Sbjct: 1243 PSNTGAHPHILSQYGGPLHISSGALMEDEKVTPLGLSDQLPSAQGLLQANPAPAPFSISQ 1302

Query: 711  LPAPASNIEQQVVVNPKLQNLGLQMHFQSVLPIAMDRAIKEXXXXXXXXXXXXATQTTKE 890
            LP    NI   V++N KL   GLQMHFQ  +PIAMDRAIKE            ATQTTKE
Sbjct: 1303 LPTQIPNIGTHVIINQKLSGFGLQMHFQRAVPIAMDRAIKEIVSSIVQRSVSIATQTTKE 1362

Query: 891  LVLKDYAMESDETRIRNAAHLMV 959
            LVLKDYAMESDETRI NAAHLMV
Sbjct: 1363 LVLKDYAMESDETRILNAAHLMV 1385


>ref|XP_004134286.1| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT transcription complex
            subunit 1-like [Cucumis sativus]
          Length = 2427

 Score =  481 bits (1238), Expect = e-133
 Identities = 253/335 (75%), Positives = 279/335 (83%), Gaps = 16/335 (4%)
 Frame = +3

Query: 3    YENCKV------------LLGSELIKSSSEERSLLKNLGSWLGKITIGRNQVLRAREIDP 146
            YENCKV            LLGS+LIKSSSEERSLLKNLGSWLGK+TIGRNQVLRAREIDP
Sbjct: 1051 YENCKVFVSSWIMCSLQVLLGSDLIKSSSEERSLLKNLGSWLGKLTIGRNQVLRAREIDP 1110

Query: 147  KSLIMEAYEKGLMIAVIPFTSKVLEPCHNSLAYQPPNPWTMGILGLLTEIYAMPNLKMNL 326
            KSLI+EAYEKGLMIAVIPFTSK+LEPC +SLAYQPPNPWTMGILGLL EIY+MPNLKMNL
Sbjct: 1111 KSLIIEAYEKGLMIAVIPFTSKILEPCQSSLAYQPPNPWTMGILGLLAEIYSMPNLKMNL 1170

Query: 327  KFDIEVLFKNLVVDMKDVTPTSLLKDRVREVEGNPDFSNKDVASSQPQIVGEVKSGMVST 506
            KFDIEVLFKNL VDMK++TPTSLLKDR RE++GNPDFSNKDV +SQ Q+V EVKSG++S+
Sbjct: 1171 KFDIEVLFKNLSVDMKEITPTSLLKDRKREIDGNPDFSNKDVGASQTQMVAEVKSGIMSS 1230

Query: 507  LNQVELPLDVANPSHPSGHSRLLSQYA-PLHLSSATLMEDEKLAALGLSDQLPSAQGLLQ 683
            LNQVELPL+VA PS+   H+ LLSQYA PLHLSS TLMEDEKL+ALGLSDQLP+AQGLLQ
Sbjct: 1231 LNQVELPLEVATPSNSGNHTHLLSQYATPLHLSSGTLMEDEKLSALGLSDQLPTAQGLLQ 1290

Query: 684  ---GQSPFSVSQLPAPASNIEQQVVVNPKLQNLGLQMHFQSVLPIAMDRAIKEXXXXXXX 854
                 SPFS +QLPA   NI   VV+N KL +LGL +HFQ  +PIAMDRA+KE       
Sbjct: 1291 ATPSPSPFSTNQLPAGIPNIGSLVVINQKLNSLGLHIHFQRAVPIAMDRAVKEIVSGIVQ 1350

Query: 855  XXXXXATQTTKELVLKDYAMESDETRIRNAAHLMV 959
                 ATQTTKELVLKDYAMESDETRI NAAHLMV
Sbjct: 1351 RSVSIATQTTKELVLKDYAMESDETRIFNAAHLMV 1385


>ref|XP_002301259.1| predicted protein [Populus trichocarpa] gi|222842985|gb|EEE80532.1|
            predicted protein [Populus trichocarpa]
          Length = 1987

 Score =  478 bits (1230), Expect = e-133
 Identities = 247/323 (76%), Positives = 271/323 (83%), Gaps = 4/323 (1%)
 Frame = +3

Query: 3    YENCKVLLGSELIKSSSEERSLLKNLGSWLGKITIGRNQVLRAREIDPKSLIMEAYEKGL 182
            YENCKVLLGSELIKSSSEERSLLKNLGSWLGK+TIGRNQVLRAREIDPKSLIMEAYEKGL
Sbjct: 1020 YENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQVLRAREIDPKSLIMEAYEKGL 1079

Query: 183  MIAVIPFTSKVLEPCHNSLAYQPPNPWTMGILGLLTEIYAMPNLKMNLKFDIEVLFKNLV 362
            MIAVIPFTSKVLEPC NSLAYQPPNPWTMGILGLL EIY+MPNLKMNLKFDIEVLFKNL 
Sbjct: 1080 MIAVIPFTSKVLEPCQNSLAYQPPNPWTMGILGLLAEIYSMPNLKMNLKFDIEVLFKNLG 1139

Query: 363  VDMKDVTPTSLLKDRVREVEGNPDFSNKDVASSQPQIVGEVKSGMVSTLNQVELPLDVAN 542
            VDMKD+ PTSLLKDR RE+EGNPDFSNKD+ +SQPQ++ EVKSG++S LN VELPL+ A+
Sbjct: 1140 VDMKDIAPTSLLKDRKREIEGNPDFSNKDIGASQPQMLPEVKSGIISPLNHVELPLEGAS 1199

Query: 543  PSHPSGHSRLLSQY-APLHLSSATLMEDEKLAALGLSDQLPSAQGLLQ---GQSPFSVSQ 710
            P +   H+ +LSQY +P+HLSS TLMEDEKLAALGLSDQLPSAQGL Q    QS F  SQ
Sbjct: 1200 PPNSGVHAHMLSQYTSPVHLSSGTLMEDEKLAALGLSDQLPSAQGLFQATPSQSTFPASQ 1259

Query: 711  LPAPASNIEQQVVVNPKLQNLGLQMHFQSVLPIAMDRAIKEXXXXXXXXXXXXATQTTKE 890
            LP    NI   V++N KL + GL +HFQ ++P  MDRAIK+            ATQTTKE
Sbjct: 1260 LPTAIPNIGTHVIINQKLNSWGLHVHFQRLVPTVMDRAIKDIVSGIVQRSVSIATQTTKE 1319

Query: 891  LVLKDYAMESDETRIRNAAHLMV 959
            LVLKDYAMESDETRI NAAHLMV
Sbjct: 1320 LVLKDYAMESDETRIYNAAHLMV 1342


>emb|CBI16596.3| unnamed protein product [Vitis vinifera]
          Length = 2452

 Score =  457 bits (1177), Expect = e-126
 Identities = 238/323 (73%), Positives = 265/323 (82%), Gaps = 4/323 (1%)
 Frame = +3

Query: 3    YENCKVLLGSELIKSSSEERSLLKNLGSWLGKITIGRNQVLRAREIDPKSLIMEAYEKGL 182
            YENC+VLLGSELIKSSSEERSLLKNLGSWLGK TIGRNQVL+AREIDPKSLI+EAYEKGL
Sbjct: 1076 YENCRVLLGSELIKSSSEERSLLKNLGSWLGKFTIGRNQVLKAREIDPKSLIIEAYEKGL 1135

Query: 183  MIAVIPFTSKVLEPCHNSLAYQPPNPWTMGILGLLTEIYAMPNLKMNLKFDIEVLFKNLV 362
            MIAVIPFTSK+LEPC NS+AYQPPNPWTMGILGLL EIY +PNLKMNLKFDIEVLFKNL 
Sbjct: 1136 MIAVIPFTSKILEPCRNSIAYQPPNPWTMGILGLLAEIYVLPNLKMNLKFDIEVLFKNLG 1195

Query: 363  VDMKDVTPTSLLKDRVREVEGNPDFSNKDVASSQPQIVGEVKSGMVSTLNQVELPLDVAN 542
            VDMKD+TPTSLL++R R++EGNPDFSNKD+ +S P ++ EVKS +VST N+VELP++VA+
Sbjct: 1196 VDMKDITPTSLLENRPRQIEGNPDFSNKDIGASHPPMISEVKSAIVSTPNKVELPVEVAS 1255

Query: 543  PSHPSGHSRLLSQY-APLHLSSATLMEDEKLAALGLSDQLPSAQGLLQ---GQSPFSVSQ 710
            P H  GH+ LLSQY AP HL + TLMEDEKL AL LSDQLPSAQGLLQ    Q PFSVSQ
Sbjct: 1256 P-HTGGHTHLLSQYAAPFHLPTGTLMEDEKLVALRLSDQLPSAQGLLQATPSQLPFSVSQ 1314

Query: 711  LPAPASNIEQQVVVNPKLQNLGLQMHFQSVLPIAMDRAIKEXXXXXXXXXXXXATQTTKE 890
                  NI   V++N K+  LGL +HFQ V PIAMDRAIKE            A+QTTKE
Sbjct: 1315 PTTLIPNIGTHVIINQKISALGLHLHFQRVAPIAMDRAIKEILSGMVQRSVNIASQTTKE 1374

Query: 891  LVLKDYAMESDETRIRNAAHLMV 959
            LVLKDYAMESDE  I NAAH MV
Sbjct: 1375 LVLKDYAMESDEALIYNAAHAMV 1397


>emb|CBI24630.3| unnamed protein product [Vitis vinifera]
          Length = 1496

 Score =  449 bits (1156), Expect = e-124
 Identities = 231/323 (71%), Positives = 266/323 (82%), Gaps = 4/323 (1%)
 Frame = +3

Query: 3    YENCKVLLGSELIKSSSEERSLLKNLGSWLGKITIGRNQVLRAREIDPKSLIMEAYEKGL 182
            YENCKVLL SELIKSSSEERSLLKNLGSWLGK TIGRNQVLRAREIDPKSLI+EAYEKGL
Sbjct: 1074 YENCKVLLRSELIKSSSEERSLLKNLGSWLGKFTIGRNQVLRAREIDPKSLIIEAYEKGL 1133

Query: 183  MIAVIPFTSKVLEPCHNSLAYQPPNPWTMGILGLLTEIYAMPNLKMNLKFDIEVLFKNLV 362
            MIAV+PFTSK+LEPC +SLAY+PPNPWTM ILGLL EIYA+PNLKMNLKFDIEVLFKNL 
Sbjct: 1134 MIAVVPFTSKILEPCQSSLAYRPPNPWTMAILGLLVEIYALPNLKMNLKFDIEVLFKNLG 1193

Query: 363  VDMKDVTPTSLLKDRVREVEGNPDFSNKDVASSQPQIVGEVKSGMVSTLNQVELPLDVAN 542
            VDMK+V PTSLLKDRVRE+EGNPDFSNKDV +SQPQ+V ++  G++STL+QVEL  D+ N
Sbjct: 1194 VDMKEVKPTSLLKDRVREIEGNPDFSNKDVGASQPQMVSDINPGIMSTLSQVELQPDIVN 1253

Query: 543  PSHPSGHSRLLSQY-APLHLSSATLMEDEKLAALGLSDQLPSAQGLLQ---GQSPFSVSQ 710
             SHP GH  +++QY + LHL+S +L ED+K+A L L D+LP+ QGL Q    QSP+SV Q
Sbjct: 1254 SSHPGGHLNVMTQYPSGLHLASGSLTEDDKIATLSLGDRLPTGQGLSQVPPAQSPYSVGQ 1313

Query: 711  LPAPASNIEQQVVVNPKLQNLGLQMHFQSVLPIAMDRAIKEXXXXXXXXXXXXATQTTKE 890
            +PAP  NI   ++ N KL  LGL  +FQ V+PIAM+RAIK+            ATQTTKE
Sbjct: 1314 IPAPIPNIGSHIIFNQKLGALGLH-YFQRVVPIAMERAIKDIMAPIVQRSVTIATQTTKE 1372

Query: 891  LVLKDYAMESDETRIRNAAHLMV 959
            LVLKDYAMESDE+RI NAAHLMV
Sbjct: 1373 LVLKDYAMESDESRIYNAAHLMV 1395


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