BLASTX nr result

ID: Panax21_contig00014586 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014586
         (463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN26769.1| unknown [Zea mays] gi|413956147|gb|AFW88796.1| hi...    70   2e-10
gb|ACG30088.1| histone H2A [Zea mays]                                  70   2e-10
ref|XP_003547416.1| PREDICTED: histone H2A-like isoform 2 [Glyci...    65   6e-09
gb|EME28915.1| histone H2A [Galdieria sulphuraria]                     59   4e-07
gb|EME26023.1| histone H2A [Galdieria sulphuraria]                     59   4e-07

>gb|ACN26769.1| unknown [Zea mays] gi|413956147|gb|AFW88796.1| histone2A1 [Zea
           mays]
          Length = 191

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 49/119 (41%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
 Frame = -3

Query: 353 PVSCIASFLKAEK*PNV--SGAPIYLAAVLKYLITEV*LIFLPS*RLRN*FWLWIPRRGE 180
           PV  I  +LK  +      +GAP+YLAAVL+YL  EV                    + E
Sbjct: 40  PVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEV-------------------LQFE 80

Query: 179 PLCLILIHHQNSQFIAFCISXXXXXXXXXXLELAGNAARDNKKTRIVPRHIQLAVRNDE 3
           P  L ++  + S  I  C+           LELAGNAARDNKKTRI+PRH+ LA+RNDE
Sbjct: 81  PSSLFVLIWRRS--INSCVPIRFASLFDQVLELAGNAARDNKKTRIIPRHVLLAIRNDE 137


>gb|ACG30088.1| histone H2A [Zea mays]
          Length = 191

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 49/119 (41%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
 Frame = -3

Query: 353 PVSCIASFLKAEK*PNV--SGAPIYLAAVLKYLITEV*LIFLPS*RLRN*FWLWIPRRGE 180
           PV  I  +LK  +      +GAP+YLAAVL+YL  EV                    + E
Sbjct: 40  PVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEV-------------------LQFE 80

Query: 179 PLCLILIHHQNSQFIAFCISXXXXXXXXXXLELAGNAARDNKKTRIVPRHIQLAVRNDE 3
           P  L ++  + S  I  C+           LELAGNAARDNKKTRI+PRH+ LA+RNDE
Sbjct: 81  PSSLFVLIWRRS--INSCVPIRFASLFDQVLELAGNAARDNKKTRIIPRHVLLAIRNDE 137


>ref|XP_003547416.1| PREDICTED: histone H2A-like isoform 2 [Glycine max]
          Length = 165

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 47/119 (39%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
 Frame = -3

Query: 353 PVSCIASFLKAEK*PNV--SGAPIYLAAVLKYLITEV*LIFLPS*RLRN*FWLWIPRRGE 180
           PV  I  +LK  +      +GAP+YLAAVL+YL  EV  +F          W+WI +   
Sbjct: 35  PVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVTCLFCEIE-----MWVWIVK--- 86

Query: 179 PLCLILIHHQNSQFIAFCISXXXXXXXXXXLELAGNAARDNKKTRIVPRHIQLAVRNDE 3
                                         LELAGNAARDNKK RI+PRH+ LAVRNDE
Sbjct: 87  -----------------------------VLELAGNAARDNKKNRIIPRHVLLAVRNDE 116


>gb|EME28915.1| histone H2A [Galdieria sulphuraria]
          Length = 121

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/28 (100%), Positives = 28/28 (100%)
 Frame = -3

Query: 86  ELAGNAARDNKKTRIVPRHIQLAVRNDE 3
           ELAGNAARDNKKTRIVPRHIQLAVRNDE
Sbjct: 59  ELAGNAARDNKKTRIVPRHIQLAVRNDE 86


>gb|EME26023.1| histone H2A [Galdieria sulphuraria]
          Length = 119

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/28 (100%), Positives = 28/28 (100%)
 Frame = -3

Query: 86  ELAGNAARDNKKTRIVPRHIQLAVRNDE 3
           ELAGNAARDNKKTRIVPRHIQLAVRNDE
Sbjct: 59  ELAGNAARDNKKTRIVPRHIQLAVRNDE 86


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