BLASTX nr result
ID: Panax21_contig00014586
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00014586 (463 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ACN26769.1| unknown [Zea mays] gi|413956147|gb|AFW88796.1| hi... 70 2e-10 gb|ACG30088.1| histone H2A [Zea mays] 70 2e-10 ref|XP_003547416.1| PREDICTED: histone H2A-like isoform 2 [Glyci... 65 6e-09 gb|EME28915.1| histone H2A [Galdieria sulphuraria] 59 4e-07 gb|EME26023.1| histone H2A [Galdieria sulphuraria] 59 4e-07 >gb|ACN26769.1| unknown [Zea mays] gi|413956147|gb|AFW88796.1| histone2A1 [Zea mays] Length = 191 Score = 69.7 bits (169), Expect = 2e-10 Identities = 49/119 (41%), Positives = 62/119 (52%), Gaps = 2/119 (1%) Frame = -3 Query: 353 PVSCIASFLKAEK*PNV--SGAPIYLAAVLKYLITEV*LIFLPS*RLRN*FWLWIPRRGE 180 PV I +LK + +GAP+YLAAVL+YL EV + E Sbjct: 40 PVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEV-------------------LQFE 80 Query: 179 PLCLILIHHQNSQFIAFCISXXXXXXXXXXLELAGNAARDNKKTRIVPRHIQLAVRNDE 3 P L ++ + S I C+ LELAGNAARDNKKTRI+PRH+ LA+RNDE Sbjct: 81 PSSLFVLIWRRS--INSCVPIRFASLFDQVLELAGNAARDNKKTRIIPRHVLLAIRNDE 137 >gb|ACG30088.1| histone H2A [Zea mays] Length = 191 Score = 69.7 bits (169), Expect = 2e-10 Identities = 49/119 (41%), Positives = 62/119 (52%), Gaps = 2/119 (1%) Frame = -3 Query: 353 PVSCIASFLKAEK*PNV--SGAPIYLAAVLKYLITEV*LIFLPS*RLRN*FWLWIPRRGE 180 PV I +LK + +GAP+YLAAVL+YL EV + E Sbjct: 40 PVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEV-------------------LQFE 80 Query: 179 PLCLILIHHQNSQFIAFCISXXXXXXXXXXLELAGNAARDNKKTRIVPRHIQLAVRNDE 3 P L ++ + S I C+ LELAGNAARDNKKTRI+PRH+ LA+RNDE Sbjct: 81 PSSLFVLIWRRS--INSCVPIRFASLFDQVLELAGNAARDNKKTRIIPRHVLLAIRNDE 137 >ref|XP_003547416.1| PREDICTED: histone H2A-like isoform 2 [Glycine max] Length = 165 Score = 65.1 bits (157), Expect = 6e-09 Identities = 47/119 (39%), Positives = 57/119 (47%), Gaps = 2/119 (1%) Frame = -3 Query: 353 PVSCIASFLKAEK*PNV--SGAPIYLAAVLKYLITEV*LIFLPS*RLRN*FWLWIPRRGE 180 PV I +LK + +GAP+YLAAVL+YL EV +F W+WI + Sbjct: 35 PVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVTCLFCEIE-----MWVWIVK--- 86 Query: 179 PLCLILIHHQNSQFIAFCISXXXXXXXXXXLELAGNAARDNKKTRIVPRHIQLAVRNDE 3 LELAGNAARDNKK RI+PRH+ LAVRNDE Sbjct: 87 -----------------------------VLELAGNAARDNKKNRIIPRHVLLAVRNDE 116 >gb|EME28915.1| histone H2A [Galdieria sulphuraria] Length = 121 Score = 58.9 bits (141), Expect = 4e-07 Identities = 28/28 (100%), Positives = 28/28 (100%) Frame = -3 Query: 86 ELAGNAARDNKKTRIVPRHIQLAVRNDE 3 ELAGNAARDNKKTRIVPRHIQLAVRNDE Sbjct: 59 ELAGNAARDNKKTRIVPRHIQLAVRNDE 86 >gb|EME26023.1| histone H2A [Galdieria sulphuraria] Length = 119 Score = 58.9 bits (141), Expect = 4e-07 Identities = 28/28 (100%), Positives = 28/28 (100%) Frame = -3 Query: 86 ELAGNAARDNKKTRIVPRHIQLAVRNDE 3 ELAGNAARDNKKTRIVPRHIQLAVRNDE Sbjct: 59 ELAGNAARDNKKTRIVPRHIQLAVRNDE 86