BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014564
         (727 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P30956.1|RK28_TOBAC RecName: Full=50S ribosomal protein L28, ...   192   8e-47
ref|XP_002285387.1| PREDICTED: 50S ribosomal protein L28, chloro...   190   2e-46
emb|CBI23685.3| unnamed protein product [Vitis vinifera]              190   3e-46
gb|ABK95755.1| unknown [Populus trichocarpa]                          190   3e-46
gb|ABK96762.1| unknown [Populus trichocarpa x Populus deltoides]      189   5e-46

>sp|P30956.1|RK28_TOBAC RecName: Full=50S ribosomal protein L28, chloroplastic; AltName:
           Full=CL28; Flags: Precursor gi|279656|pir||R5NT28
           ribosomal protein L28 precursor, chloroplast - tobacco
           gi|189096147|pdb|3BBO|Y Chain Y, Homology Model For The
           Spinach Chloroplast 50s Subunit Fitted To 9.4a Cryo-Em
           Map Of The 70s Chlororibosome gi|20016|emb|CAA48211.1|
           ribosomal protein CL28 [Nicotiana tabacum]
          Length = 151

 Score =  192 bits (487), Expect = 8e-47
 Identities = 96/116 (82%), Positives = 103/116 (88%), Gaps = 3/116 (2%)
 Frame = -3

Query: 545 SELGFVTSQLSGIQISYTHL---TRPISAPLKLPLQPVARRVCPFTGKKANKANKVSHSN 375
           SEL FVTSQLSG++IS TH    + P+S P K  LQPVARR+CPFTGKK+N+ANKVSHSN
Sbjct: 36  SELSFVTSQLSGLKISSTHFISSSAPLSVPFKPSLQPVARRICPFTGKKSNRANKVSHSN 95

Query: 374 HKTKKLQFVNLQYKRIWWEAGNRYVKLRLSTKAIKTIEKNGLDAVAKKAGIDLRKK 207
           HKTKKLQFVNLQYKRIWWEAG RYVKLRLSTKAIKTIEKNGLDAVAKKAGIDL KK
Sbjct: 96  HKTKKLQFVNLQYKRIWWEAGKRYVKLRLSTKAIKTIEKNGLDAVAKKAGIDLSKK 151


>ref|XP_002285387.1| PREDICTED: 50S ribosomal protein L28, chloroplastic [Vitis
           vinifera]
          Length = 146

 Score =  190 bits (483), Expect = 2e-46
 Identities = 100/123 (81%), Positives = 105/123 (85%), Gaps = 3/123 (2%)
 Frame = -3

Query: 566 KTKFGSDSELGFVTSQLSGIQISYTHLTRPI---SAPLKLPLQPVARRVCPFTGKKANKA 396
           K K  SD  L FVTSQ  GI+IS THL  P    SAPL LPL+PVARRVCPFTGKKANKA
Sbjct: 26  KAKMASD--LAFVTSQFGGIKISCTHLQLPNPIPSAPLTLPLRPVARRVCPFTGKKANKA 83

Query: 395 NKVSHSNHKTKKLQFVNLQYKRIWWEAGNRYVKLRLSTKAIKTIEKNGLDAVAKKAGIDL 216
           NKVS SNHKTKKLQFVNLQYK+IWWEAG RYVKLRLSTKA+KTIEKNGLDAVAKKAGIDL
Sbjct: 84  NKVSFSNHKTKKLQFVNLQYKKIWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDL 143

Query: 215 RKK 207
           RK+
Sbjct: 144 RKE 146


>emb|CBI23685.3| unnamed protein product [Vitis vinifera]
          Length = 118

 Score =  190 bits (482), Expect = 3e-46
 Identities = 97/116 (83%), Positives = 103/116 (88%), Gaps = 3/116 (2%)
 Frame = -3

Query: 545 SELGFVTSQLSGIQISYTHLTRPI---SAPLKLPLQPVARRVCPFTGKKANKANKVSHSN 375
           S+L FVTSQ  GI+IS THL  P    SAPL LPL+PVARRVCPFTGKKANKANKVS SN
Sbjct: 3   SDLAFVTSQFGGIKISCTHLQLPNPIPSAPLTLPLRPVARRVCPFTGKKANKANKVSFSN 62

Query: 374 HKTKKLQFVNLQYKRIWWEAGNRYVKLRLSTKAIKTIEKNGLDAVAKKAGIDLRKK 207
           HKTKKLQFVNLQYK+IWWEAG RYVKLRLSTKA+KTIEKNGLDAVAKKAGIDLRK+
Sbjct: 63  HKTKKLQFVNLQYKKIWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE 118


>gb|ABK95755.1| unknown [Populus trichocarpa]
          Length = 150

 Score =  190 bits (482), Expect = 3e-46
 Identities = 98/121 (80%), Positives = 106/121 (87%), Gaps = 1/121 (0%)
 Frame = -3

Query: 566 KTKFGSDSELGFVTSQLSGIQISYTHLTRPISAPLKLPLQPV-ARRVCPFTGKKANKANK 390
           KT   S SE+GFVTSQLSGI+ISY    +P+SAP    LQPV ARR+CPFTGKKAN+ANK
Sbjct: 31  KTSLVSVSEIGFVTSQLSGIRISYNP-PKPLSAPFSPALQPVIARRICPFTGKKANRANK 89

Query: 389 VSHSNHKTKKLQFVNLQYKRIWWEAGNRYVKLRLSTKAIKTIEKNGLDAVAKKAGIDLRK 210
           VS SNHKTKKLQFVNLQYKR+WWEAG RYVKLRLSTKA+KTIEKNGLDAVAKKAGIDLRK
Sbjct: 90  VSFSNHKTKKLQFVNLQYKRVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 149

Query: 209 K 207
           K
Sbjct: 150 K 150


>gb|ABK96762.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 153

 Score =  189 bits (480), Expect = 5e-46
 Identities = 98/121 (80%), Positives = 105/121 (86%), Gaps = 1/121 (0%)
 Frame = -3

Query: 566 KTKFGSDSELGFVTSQLSGIQISYTHLTRPISAPLKLPLQPV-ARRVCPFTGKKANKANK 390
           KT   S SE+GFVTSQLSGI+ISY     P+SAP    LQPV ARR+CPFTGKKAN+ANK
Sbjct: 34  KTSLVSVSEIGFVTSQLSGIRISYNP-PEPLSAPFSPALQPVIARRICPFTGKKANRANK 92

Query: 389 VSHSNHKTKKLQFVNLQYKRIWWEAGNRYVKLRLSTKAIKTIEKNGLDAVAKKAGIDLRK 210
           VS SNHKTKKLQFVNLQYKR+WWEAG RYVKLRLSTKA+KTIEKNGLDAVAKKAGIDLRK
Sbjct: 93  VSFSNHKTKKLQFVNLQYKRVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 152

Query: 209 K 207
           K
Sbjct: 153 K 153