BLASTX nr result

ID: Panax21_contig00014560 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014560
         (486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528638.1| PREDICTED: ubiquitin-like-specific protease ...    62   6e-08
ref|XP_003609680.1| Sentrin-specific protease [Medicago truncatu...    60   2e-07
ref|XP_003550537.1| PREDICTED: ubiquitin-like-specific protease ...    58   7e-07
tpg|DAA41740.1| TPA: putative ulp1 protease family protein [Zea ...    56   3e-06
ref|XP_003533357.1| PREDICTED: ubiquitin-like-specific protease ...    55   8e-06

>ref|XP_003528638.1| PREDICTED: ubiquitin-like-specific protease ESD4-like [Glycine max]
          Length = 512

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 2/132 (1%)
 Frame = -2

Query: 434 SHPEGLYKFEFKDVNCLRPNGWLWEHVLDAYLLLLRDREAKMCKEGIQRWARFYFMPTYF 255
           SH +   +   +   CLRP  WL + V++ YL LL++RE    +   Q++   +F  T+F
Sbjct: 304 SHEKSGIEISGEKFQCLRPGAWLNDEVINVYLELLKERE----RREPQKFLNCHFFSTFF 359

Query: 254 --ALLGTQNLPSAGVDMPTIRKFLRSYINPTVGAPVHECDYIFVPVFNETNSHFCLFIWS 81
              L+  +N    G D  ++R++        +G  +HECD IFVP+  E   H+CL + +
Sbjct: 360 YKRLISGKN----GYDFKSVRRWTS---QKKLGYGLHECDKIFVPIHKEI--HWCLAVIN 410

Query: 80  VNKWKVMLLDPL 45
               K   LD L
Sbjct: 411 KKDKKFQYLDSL 422


>ref|XP_003609680.1| Sentrin-specific protease [Medicago truncatula]
           gi|355510735|gb|AES91877.1| Sentrin-specific protease
           [Medicago truncatula]
          Length = 490

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 40/132 (30%), Positives = 69/132 (52%), Gaps = 2/132 (1%)
 Frame = -2

Query: 434 SHPEGLYKFEFKDVNCLRPNGWLWEHVLDAYLLLLRDREAKMCKEGIQRWARFYFMPTYF 255
           +H +   +   K   CLRP  WL + V++ YL LL++RE    +   Q++ + +F  T+F
Sbjct: 282 NHEKSNIEISGKMFRCLRPGEWLNDEVINLYLELLKERE----RREPQKFLKCHFFNTFF 337

Query: 254 --ALLGTQNLPSAGVDMPTIRKFLRSYINPTVGAPVHECDYIFVPVFNETNSHFCLFIWS 81
              L+ ++N+     D  ++R++        +G  +HECD IFVP+   T  H+CL + +
Sbjct: 338 YKKLINSKNV----YDYKSVRRWT---TQKKLGYGLHECDKIFVPIHQGT--HWCLAVIN 388

Query: 80  VNKWKVMLLDPL 45
             + K   LD L
Sbjct: 389 KKEKKFQYLDSL 400


>ref|XP_003550537.1| PREDICTED: ubiquitin-like-specific protease ESD4-like [Glycine max]
          Length = 500

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 2/132 (1%)
 Frame = -2

Query: 434 SHPEGLYKFEFKDVNCLRPNGWLWEHVLDAYLLLLRDREAKMCKEGIQRWARFYFMPTYF 255
           SH +   +   +   CLRP  WL + V++ YL LL++RE    +    ++   +F  T+F
Sbjct: 292 SHEKSGIEISGEKFQCLRPGAWLNDEVINMYLELLKERE----RREPLKFLNCHFFNTFF 347

Query: 254 --ALLGTQNLPSAGVDMPTIRKFLRSYINPTVGAPVHECDYIFVPVFNETNSHFCLFIWS 81
              L+  +N    G D  ++R++        +G  +HECD IFVP+  E   H+CL + +
Sbjct: 348 YKKLISGKN----GYDFKSVRRWTS---QKKLGYGLHECDKIFVPIHKEI--HWCLAVIN 398

Query: 80  VNKWKVMLLDPL 45
               K   LD L
Sbjct: 399 KKDKKFQYLDSL 410


>tpg|DAA41740.1| TPA: putative ulp1 protease family protein [Zea mays]
          Length = 536

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 37/117 (31%), Positives = 63/117 (53%)
 Frame = -2

Query: 395 VNCLRPNGWLWEHVLDAYLLLLRDREAKMCKEGIQRWARFYFMPTYFALLGTQNLPSAGV 216
           + CLRP GWL + V++ Y+ LL++RE    K    R+ + +F  T+F    T  +  AG 
Sbjct: 342 LQCLRPRGWLNDEVINLYIELLKERE----KREPNRFLKCHFFNTFFYKRLTCGI--AGY 395

Query: 215 DMPTIRKFLRSYINPTVGAPVHECDYIFVPVFNETNSHFCLFIWSVNKWKVMLLDPL 45
           D  ++R++        +G  + EC+ IFVPV    N+H+CL + ++    +  L+ L
Sbjct: 396 DYQSVRRWTTF---KRLGYGLVECEKIFVPV--HRNAHWCLALINMKDKTLQYLESL 447


>ref|XP_003533357.1| PREDICTED: ubiquitin-like-specific protease ESD4-like [Glycine max]
          Length = 468

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 38/117 (32%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
 Frame = -2

Query: 389 CLRPNGWLWEHVLDAYLLLLRDREAKMCKEGIQRWARFYFMPTYFALLGTQNLPSA--GV 216
           CLRP GWL + V++ YL LL++RE    +   Q++ + +F  T+F     + L S   G 
Sbjct: 275 CLRPTGWLNDEVINLYLELLKERE----QREPQKFLKCHFFNTFF----YKKLISGPKGY 326

Query: 215 DMPTIRKFLRSYINPTVGAPVHECDYIFVPVFNETNSHFCLFIWSVNKWKVMLLDPL 45
           D  ++R++        +G  + ECD IFVP+  E   H+CL + +    K   LD +
Sbjct: 327 DFKSVRRWT---TQRKLGYSLLECDKIFVPIHQEI--HWCLAVINKKDKKFQYLDSM 378


Top