BLASTX nr result

ID: Panax21_contig00014557 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014557
         (875 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634851.1| PREDICTED: pentatricopeptide repeat-containi...   393   e-107
emb|CBI32989.3| unnamed protein product [Vitis vinifera]              393   e-107
emb|CAN77919.1| hypothetical protein VITISV_027645 [Vitis vinifera]   393   e-107
ref|XP_004145104.1| PREDICTED: pentatricopeptide repeat-containi...   368   1e-99
ref|XP_002518506.1| pentatricopeptide repeat-containing protein,...   365   1e-98

>ref|XP_003634851.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial-like [Vitis vinifera]
          Length = 396

 Score =  393 bits (1010), Expect = e-107
 Identities = 189/263 (71%), Positives = 219/263 (83%)
 Frame = -1

Query: 875 ELGIPRTVKSLNALLFSCIVAKNYNEVKRIFLEFPKKYGIEPNLDTYNTIIKAFCEXXXX 696
           +LG+ RTV+SLNALLFSCI+AKNY E  RIFLEFPK YGIE NLD+YNT++KAF E    
Sbjct: 132 QLGVDRTVRSLNALLFSCILAKNYKEANRIFLEFPKTYGIELNLDSYNTVLKAFSESGSS 191

Query: 695 XXXXSIVAEMERKRCKLNTTTFGTWIAGFYKEEKFDDVGKVLELMRKHEMRPGISIYNIR 516
               SI+AEM RK  K N T+FG  +AGFY EEK++DVGKVL++M +++M+PGIS YNIR
Sbjct: 192 SSGYSILAEMGRKGVKPNATSFGILLAGFYNEEKYEDVGKVLKMMEEYKMQPGISTYNIR 251

Query: 515 IQSLCKLKKSAEANALLNGILSRDMKPNSVTYCHLIHGFCKEGNLDEAKNLFKKMINRGC 336
           IQSLCKLKKS+EA ALL+GIL+R MKPNS TYCHLIHGFCKEGNLDEAK LFK M+NRGC
Sbjct: 252 IQSLCKLKKSSEAKALLDGILARRMKPNSETYCHLIHGFCKEGNLDEAKKLFKDMVNRGC 311

Query: 335 KPDSDCYFTLVYFLCQGGDFETALLICKESLAKGWIPNFSTMKSLVNGLANISKVDEALE 156
           KPDSDCYFTLVYFLCQGGDFE+AL  CKE + KGW PN STM SLVNGL +ISKV+EA E
Sbjct: 312 KPDSDCYFTLVYFLCQGGDFESALRFCKECMEKGWFPNISTMTSLVNGLVSISKVEEARE 371

Query: 155 LVGQMKEKFPKFTESWNEIEEGL 87
           L+GQ+KEKF +  + WNEIE GL
Sbjct: 372 LIGQIKEKFSRNVDKWNEIEAGL 394


>emb|CBI32989.3| unnamed protein product [Vitis vinifera]
          Length = 412

 Score =  393 bits (1010), Expect = e-107
 Identities = 189/263 (71%), Positives = 219/263 (83%)
 Frame = -1

Query: 875 ELGIPRTVKSLNALLFSCIVAKNYNEVKRIFLEFPKKYGIEPNLDTYNTIIKAFCEXXXX 696
           +LG+ RTV+SLNALLFSCI+AKNY E  RIFLEFPK YGIE NLD+YNT++KAF E    
Sbjct: 148 QLGVDRTVRSLNALLFSCILAKNYKEANRIFLEFPKTYGIELNLDSYNTVLKAFSESGSS 207

Query: 695 XXXXSIVAEMERKRCKLNTTTFGTWIAGFYKEEKFDDVGKVLELMRKHEMRPGISIYNIR 516
               SI+AEM RK  K N T+FG  +AGFY EEK++DVGKVL++M +++M+PGIS YNIR
Sbjct: 208 SSGYSILAEMGRKGVKPNATSFGILLAGFYNEEKYEDVGKVLKMMEEYKMQPGISTYNIR 267

Query: 515 IQSLCKLKKSAEANALLNGILSRDMKPNSVTYCHLIHGFCKEGNLDEAKNLFKKMINRGC 336
           IQSLCKLKKS+EA ALL+GIL+R MKPNS TYCHLIHGFCKEGNLDEAK LFK M+NRGC
Sbjct: 268 IQSLCKLKKSSEAKALLDGILARRMKPNSETYCHLIHGFCKEGNLDEAKKLFKDMVNRGC 327

Query: 335 KPDSDCYFTLVYFLCQGGDFETALLICKESLAKGWIPNFSTMKSLVNGLANISKVDEALE 156
           KPDSDCYFTLVYFLCQGGDFE+AL  CKE + KGW PN STM SLVNGL +ISKV+EA E
Sbjct: 328 KPDSDCYFTLVYFLCQGGDFESALRFCKECMEKGWFPNISTMTSLVNGLVSISKVEEARE 387

Query: 155 LVGQMKEKFPKFTESWNEIEEGL 87
           L+GQ+KEKF +  + WNEIE GL
Sbjct: 388 LIGQIKEKFSRNVDKWNEIEAGL 410


>emb|CAN77919.1| hypothetical protein VITISV_027645 [Vitis vinifera]
          Length = 396

 Score =  393 bits (1010), Expect = e-107
 Identities = 189/263 (71%), Positives = 219/263 (83%)
 Frame = -1

Query: 875 ELGIPRTVKSLNALLFSCIVAKNYNEVKRIFLEFPKKYGIEPNLDTYNTIIKAFCEXXXX 696
           +LG+ RTV+SLNALLFSCI+AKNY E  RIFLEFPK YGIE NLD+YNT++KAF E    
Sbjct: 132 QLGVDRTVRSLNALLFSCILAKNYKEANRIFLEFPKTYGIELNLDSYNTVLKAFSESGSS 191

Query: 695 XXXXSIVAEMERKRCKLNTTTFGTWIAGFYKEEKFDDVGKVLELMRKHEMRPGISIYNIR 516
               SI+AEM RK  K N T+FG  +AGFY EEK++DVGKVL++M +++M+PGIS YNIR
Sbjct: 192 SSGYSILAEMGRKGVKPNATSFGILLAGFYNEEKYEDVGKVLKMMEEYKMQPGISTYNIR 251

Query: 515 IQSLCKLKKSAEANALLNGILSRDMKPNSVTYCHLIHGFCKEGNLDEAKNLFKKMINRGC 336
           IQSLCKLKKS+EA ALL+GIL+R MKPNS TYCHLIHGFCKEGNLDEAK LFK M+NRGC
Sbjct: 252 IQSLCKLKKSSEAKALLDGILARRMKPNSETYCHLIHGFCKEGNLDEAKKLFKDMVNRGC 311

Query: 335 KPDSDCYFTLVYFLCQGGDFETALLICKESLAKGWIPNFSTMKSLVNGLANISKVDEALE 156
           KPDSDCYFTLVYFLCQGGDFE+AL  CKE + KGW PN STM SLVNGL +ISKV+EA E
Sbjct: 312 KPDSDCYFTLVYFLCQGGDFESALRFCKECMEKGWFPNISTMTSLVNGLVSISKVEEAQE 371

Query: 155 LVGQMKEKFPKFTESWNEIEEGL 87
           L+GQ+KEKF +  + WNEIE GL
Sbjct: 372 LIGQIKEKFSRNVDKWNEIEAGL 394


>ref|XP_004145104.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial-like [Cucumis sativus]
           gi|449471723|ref|XP_004153390.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial-like [Cucumis sativus]
           gi|449530564|ref|XP_004172264.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial-like [Cucumis sativus]
          Length = 405

 Score =  368 bits (944), Expect = 1e-99
 Identities = 173/263 (65%), Positives = 214/263 (81%)
 Frame = -1

Query: 875 ELGIPRTVKSLNALLFSCIVAKNYNEVKRIFLEFPKKYGIEPNLDTYNTIIKAFCEXXXX 696
           ELG+  +VK+LNALLF+C +AK+Y E+KR+++EFPK YGIEP++DTYN +IKAF E    
Sbjct: 141 ELGVRHSVKTLNALLFACNLAKDYKELKRVYMEFPKIYGIEPDIDTYNRVIKAFSESGSS 200

Query: 695 XXXXSIVAEMERKRCKLNTTTFGTWIAGFYKEEKFDDVGKVLELMRKHEMRPGISIYNIR 516
               SIVAEM+RK  K N TTF  W+AG Y EEKF+DV KVL LM K+ +R G++ YN R
Sbjct: 201 SSVSSIVAEMDRKDVKPNATTFANWLAGCYMEEKFEDVEKVLNLMEKYGVRRGVATYNAR 260

Query: 515 IQSLCKLKKSAEANALLNGILSRDMKPNSVTYCHLIHGFCKEGNLDEAKNLFKKMINRGC 336
           I+SLCKLK+S EA AL +G+LSR M PNSVTYC LIHGFCKEGNLDEAK++FK+MIN GC
Sbjct: 261 IRSLCKLKRSTEAKALFDGMLSRGMDPNSVTYCELIHGFCKEGNLDEAKSIFKRMINSGC 320

Query: 335 KPDSDCYFTLVYFLCQGGDFETALLICKESLAKGWIPNFSTMKSLVNGLANISKVDEALE 156
           +PDS+CYFTL YFLC+GGD+ETA  IC ES+ KGW+PNFSTMKSLV+GL +ISKV+EA +
Sbjct: 321 QPDSECYFTLTYFLCRGGDYETAFKICLESMKKGWVPNFSTMKSLVDGLVSISKVEEAKQ 380

Query: 155 LVGQMKEKFPKFTESWNEIEEGL 87
           L+GQ+KE+F K  E W+EIE GL
Sbjct: 381 LIGQIKERFSKNVEKWSEIEAGL 403


>ref|XP_002518506.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542351|gb|EEF43893.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 397

 Score =  365 bits (936), Expect = 1e-98
 Identities = 176/265 (66%), Positives = 215/265 (81%), Gaps = 1/265 (0%)
 Frame = -1

Query: 872 LGIPRTVKSLNALLFSCIVAKNYNEVKRIFLEFPKKYGIEPNLDTYNTIIKAFCEXXXXX 693
           LG   +VK  NALLF+C +AK+Y+EVKR+FLEFPK Y IEPNLD+YNT+IK+FC+     
Sbjct: 133 LGNNGSVKVFNALLFACYLAKDYSEVKRVFLEFPKNYNIEPNLDSYNTVIKSFCDSESSS 192

Query: 692 XXXSIVAEMERKRCKLNTTTFGTWIAGFYKEEKFDDVGKVLELMR-KHEMRPGISIYNIR 516
              S++AEM+RKR K N TTFG  +AGFYKEEK++DVGKVLE+M+ K+ +RPG+S YNIR
Sbjct: 193 SGFSVLAEMDRKRLKPNATTFGHLLAGFYKEEKYEDVGKVLEMMKDKYGIRPGVSTYNIR 252

Query: 515 IQSLCKLKKSAEANALLNGILSRDMKPNSVTYCHLIHGFCKEGNLDEAKNLFKKMINRGC 336
           IQSLCKLKKSAEA ALL+G+LSR MKPNSVTY HLIHGFC EG+L+  K LFK M+NRG 
Sbjct: 253 IQSLCKLKKSAEAKALLDGMLSRQMKPNSVTYAHLIHGFCNEGDLEGGKRLFKDMVNRGY 312

Query: 335 KPDSDCYFTLVYFLCQGGDFETALLICKESLAKGWIPNFSTMKSLVNGLANISKVDEALE 156
           +PDS CYFTL+++LC+G DFETAL ICKES+ K W+PN +TMKSLVNGLA I KVDEA E
Sbjct: 313 QPDSACYFTLLHYLCKGQDFETALRICKESIGKDWVPNIATMKSLVNGLAGIGKVDEAKE 372

Query: 155 LVGQMKEKFPKFTESWNEIEEGLSK 81
           L+ ++KEKF K   +W EIE GL +
Sbjct: 373 LIAKIKEKFTKNVSTWEEIEAGLPR 397


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